Description : Pectate lyase
Gene families : OG_02_0044743 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000036467 | |
| Cluster | HCCA Clusters (HRR 50 & PCC 0.5): Cluster_154 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000323 | lytic vacuole | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0000987 | cis-regulatory region sequence-specific DNA binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0001666 | response to hypoxia | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0004560 | alpha-L-fucosidase activity | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0005618 | cell wall | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006004 | fucose metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006516 | glycoprotein catabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006558 | L-phenylalanine metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006690 | icosanoid metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0007389 | pattern specification process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009094 | L-phenylalanine biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009095 | aromatic amino acid family biosynthetic process, prephenate pathway | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0009505 | plant-type cell wall | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009708 | benzyl isoquinoline alkaloid biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009740 | gibberellic acid mediated signaling pathway | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009800 | cinnamic acid biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009803 | cinnamic acid metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009820 | alkaloid metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009880 | embryonic pattern specification | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009888 | tissue development | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009908 | flower development | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009909 | regulation of flower development | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0009921 | auxin efflux carrier complex | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0009925 | basal plasma membrane | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009942 | longitudinal axis specification | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009962 | regulation of flavonoid biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009963 | positive regulation of flavonoid biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010087 | phloem or xylem histogenesis | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010089 | xylem development | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010214 | seed coat development | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010224 | response to UV-B | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010315 | auxin export across the plasma membrane | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0010329 | auxin efflux transmembrane transporter activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010338 | leaf formation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010358 | leaf shaping | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010422 | regulation of brassinosteroid biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010476 | gibberellin mediated signaling pathway | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010555 | response to mannitol | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010597 | green leaf volatile biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010893 | positive regulation of steroid biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0015928 | fucosidase activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0016139 | glycoside catabolic process | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0016837 | carbon-oxygen lyase activity, acting on polysaccharides | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0019372 | lipoxygenase pathway | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0019632 | shikimate metabolic process | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0030312 | external encapsulating structure | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0030570 | pectate lyase activity | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0030863 | cortical cytoskeleton | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0031225 | anchored component of membrane | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0033293 | monocarboxylic acid binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0035017 | cuticle pattern formation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0042537 | benzene-containing compound metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0042547 | cell wall modification involved in multidimensional cell growth | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0043455 | regulation of secondary metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0044550 | secondary metabolite biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0045834 | positive regulation of lipid metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0045892 | negative regulation of DNA-templated transcription | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0045940 | positive regulation of steroid metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0046445 | benzyl isoquinoline alkaloid metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0046886 | positive regulation of hormone biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0046889 | positive regulation of lipid biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0046890 | regulation of lipid biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0048032 | galacturonate binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0048446 | petal morphogenesis | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0048580 | regulation of post-embryonic development | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0048581 | negative regulation of post-embryonic development | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0048826 | cotyledon morphogenesis | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0048830 | adventitious root development | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0048831 | regulation of shoot system development | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0050793 | regulation of developmental process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0050810 | regulation of steroid biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051253 | negative regulation of RNA metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051665 | membrane raft localization | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0080091 | regulation of raffinose metabolic process | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0080161 | auxin transmembrane transporter activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0080162 | endoplasmic reticulum to cytosol auxin transport | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0090030 | regulation of steroid hormone biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0090421 | embryonic meristem initiation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0090567 | reproductive shoot system development | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0120254 | olefinic compound metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0120255 | olefinic compound biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1900376 | regulation of secondary metabolite biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1900377 | negative regulation of secondary metabolite biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1900384 | regulation of flavonol biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1900386 | positive regulation of flavonol biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1901141 | regulation of lignin biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1901332 | negative regulation of lateral root development | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1901348 | positive regulation of secondary cell wall biogenesis | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1901428 | regulation of syringal lignin biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1901430 | positive regulation of syringal lignin biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1902221 | erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1902223 | erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1902446 | regulation of shade avoidance | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1902448 | positive regulation of shade avoidance | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1902679 | negative regulation of RNA biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1903085 | regulation of sinapate ester biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1903086 | negative regulation of sinapate ester biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1903338 | regulation of cell wall organization or biogenesis | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1903340 | positive regulation of cell wall organization or biogenesis | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1903507 | negative regulation of nucleic acid-templated transcription | IEP | Predict GO terms from Neighborhoods |
| BP | GO:2000023 | regulation of lateral root development | IEP | Predict GO terms from Neighborhoods |
| BP | GO:2000026 | regulation of multicellular organismal development | IEP | Predict GO terms from Neighborhoods |
| BP | GO:2000069 | regulation of post-embryonic root development | IEP | Predict GO terms from Neighborhoods |
| BP | GO:2000280 | regulation of root development | IEP | Predict GO terms from Neighborhoods |
| BP | GO:2000488 | positive regulation of brassinosteroid biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:2000652 | regulation of secondary cell wall biogenesis | IEP | Predict GO terms from Neighborhoods |
| BP | GO:2000762 | regulation of phenylpropanoid metabolic process | IEP | Predict GO terms from Neighborhoods |
No InterPro domains available for this sequence
| No external refs found! |