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  5. SOLTUB.AGRIA.G00000036502

SOLTUB.AGRIA.G00000036502


Description : Ribonucleases P/MRP protein subunit POP1, putative


Gene families : OG_02_0011127 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000036502
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_165


Type GO Term Name Evidence Source
BP GO:0006364 rRNA processing IEA AHRD
CC GO:0031981 nuclear lumen IEA AHRD
CC GO:1902494 catalytic complex IEA AHRD
CC GO:1990904 ribonucleoprotein complex IEA AHRD
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Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEP Predict GO terms from Neighborhoods
CC GO:0000152 nuclear ubiquitin ligase complex IEP Predict GO terms from Neighborhoods
BP GO:0000447 endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IEP Predict GO terms from Neighborhoods
BP GO:0000460 maturation of 5.8S rRNA IEP Predict GO terms from Neighborhoods
BP GO:0000463 maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IEP Predict GO terms from Neighborhoods
BP GO:0000466 maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IEP Predict GO terms from Neighborhoods
BP GO:0000469 cleavage involved in rRNA processing IEP Predict GO terms from Neighborhoods
BP GO:0000470 maturation of LSU-rRNA IEP Predict GO terms from Neighborhoods
BP GO:0000472 endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IEP Predict GO terms from Neighborhoods
BP GO:0000478 endonucleolytic cleavage involved in rRNA processing IEP Predict GO terms from Neighborhoods
BP GO:0000479 endonucleolytic cleavage of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IEP Predict GO terms from Neighborhoods
BP GO:0000480 endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IEP Predict GO terms from Neighborhoods
BP GO:0000741 karyogamy IEP Predict GO terms from Neighborhoods
BP GO:0000966 RNA 5'-end processing IEP Predict GO terms from Neighborhoods
BP GO:0000967 rRNA 5'-end processing IEP Predict GO terms from Neighborhoods
BP GO:0001654 eye development IEP Predict GO terms from Neighborhoods
MF GO:0002020 protease binding IEP Predict GO terms from Neighborhoods
MF GO:0003724 RNA helicase activity IEP Predict GO terms from Neighborhoods
MF GO:0003746 translation elongation factor activity IEP Predict GO terms from Neighborhoods
MF GO:0003922 GMP synthase (glutamine-hydrolyzing) activity IEP Predict GO terms from Neighborhoods
MF GO:0004177 aminopeptidase activity IEP Predict GO terms from Neighborhoods
MF GO:0004386 helicase activity IEP Predict GO terms from Neighborhoods
MF GO:0005524 ATP binding IEP Predict GO terms from Neighborhoods
CC GO:0005654 nucleoplasm IEP Predict GO terms from Neighborhoods
CC GO:0005680 anaphase-promoting complex IEP Predict GO terms from Neighborhoods
CC GO:0005730 nucleolus IEP Predict GO terms from Neighborhoods
CC GO:0005819 spindle IEP Predict GO terms from Neighborhoods
BP GO:0006140 regulation of nucleotide metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006403 RNA localization IEP Predict GO terms from Neighborhoods
BP GO:0006414 translational elongation IEP Predict GO terms from Neighborhoods
BP GO:0006734 NADH metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006753 nucleoside phosphate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP Predict GO terms from Neighborhoods
BP GO:0006919 activation of cysteine-type endopeptidase activity involved in apoptotic process IEP Predict GO terms from Neighborhoods
BP GO:0007275 multicellular organism development IEP Predict GO terms from Neighborhoods
BP GO:0007423 sensory organ development IEP Predict GO terms from Neighborhoods
BP GO:0007626 locomotory behavior IEP Predict GO terms from Neighborhoods
MF GO:0008186 ATP-dependent activity, acting on RNA IEP Predict GO terms from Neighborhoods
MF GO:0008237 metallopeptidase activity IEP Predict GO terms from Neighborhoods
MF GO:0008238 exopeptidase activity IEP Predict GO terms from Neighborhoods
BP GO:0009117 nucleotide metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009790 embryo development IEP Predict GO terms from Neighborhoods
BP GO:0009793 embryo development ending in seed dormancy IEP Predict GO terms from Neighborhoods
BP GO:0009799 specification of symmetry IEP Predict GO terms from Neighborhoods
BP GO:0009855 determination of bilateral symmetry IEP Predict GO terms from Neighborhoods
BP GO:0009960 endosperm development IEP Predict GO terms from Neighborhoods
BP GO:0010073 meristem maintenance IEP Predict GO terms from Neighborhoods
BP GO:0010197 polar nucleus fusion IEP Predict GO terms from Neighborhoods
BP GO:0010449 root meristem growth IEP Predict GO terms from Neighborhoods
BP GO:0010918 positive regulation of mitochondrial membrane potential IEP Predict GO terms from Neighborhoods
BP GO:0010950 positive regulation of endopeptidase activity IEP Predict GO terms from Neighborhoods
BP GO:0010952 positive regulation of peptidase activity IEP Predict GO terms from Neighborhoods
BP GO:0010965 regulation of mitotic sister chromatid separation IEP Predict GO terms from Neighborhoods
MF GO:0016462 pyrophosphatase activity IEP Predict GO terms from Neighborhoods
BP GO:0016485 protein processing IEP Predict GO terms from Neighborhoods
MF GO:0016787 hydrolase activity IEP Predict GO terms from Neighborhoods
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Predict GO terms from Neighborhoods
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Predict GO terms from Neighborhoods
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP Predict GO terms from Neighborhoods
MF GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor IEP Predict GO terms from Neighborhoods
MF GO:0016887 ATP hydrolysis activity IEP Predict GO terms from Neighborhoods
MF GO:0017076 purine nucleotide binding IEP Predict GO terms from Neighborhoods
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP Predict GO terms from Neighborhoods
BP GO:0019079 viral genome replication IEP Predict GO terms from Neighborhoods
BP GO:0019220 regulation of phosphate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0030071 regulation of mitotic metaphase/anaphase transition IEP Predict GO terms from Neighborhoods
MF GO:0030515 snoRNA binding IEP Predict GO terms from Neighborhoods
MF GO:0030554 adenyl nucleotide binding IEP Predict GO terms from Neighborhoods
CC GO:0030687 preribosome, large subunit precursor IEP Predict GO terms from Neighborhoods
BP GO:0030808 regulation of nucleotide biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0030810 positive regulation of nucleotide biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0030968 endoplasmic reticulum unfolded protein response IEP Predict GO terms from Neighborhoods
BP GO:0030970 retrograde protein transport, ER to cytosol IEP Predict GO terms from Neighborhoods
BP GO:0031145 anaphase-promoting complex-dependent catabolic process IEP Predict GO terms from Neighborhoods
CC GO:0031461 cullin-RING ubiquitin ligase complex IEP Predict GO terms from Neighborhoods
MF GO:0031593 polyubiquitin modification-dependent protein binding IEP Predict GO terms from Neighborhoods
BP GO:0031647 regulation of protein stability IEP Predict GO terms from Neighborhoods
BP GO:0031648 protein destabilization IEP Predict GO terms from Neighborhoods
CC GO:0031983 vesicle lumen IEP Predict GO terms from Neighborhoods
BP GO:0032527 protein exit from endoplasmic reticulum IEP Predict GO terms from Neighborhoods
MF GO:0032553 ribonucleotide binding IEP Predict GO terms from Neighborhoods
MF GO:0032555 purine ribonucleotide binding IEP Predict GO terms from Neighborhoods
MF GO:0032559 adenyl ribonucleotide binding IEP Predict GO terms from Neighborhoods
BP GO:0032875 regulation of DNA endoreduplication IEP Predict GO terms from Neighborhoods
BP GO:0033045 regulation of sister chromatid segregation IEP Predict GO terms from Neighborhoods
CC GO:0034098 VCP-NPL4-UFD1 AAA ATPase complex IEP Predict GO terms from Neighborhoods
BP GO:0034471 ncRNA 5'-end processing IEP Predict GO terms from Neighborhoods
CC GO:0034774 secretory granule lumen IEP Predict GO terms from Neighborhoods
BP GO:0035266 meristem growth IEP Predict GO terms from Neighborhoods
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Predict GO terms from Neighborhoods
BP GO:0036260 RNA capping IEP Predict GO terms from Neighborhoods
BP GO:0036297 interstrand cross-link repair IEP Predict GO terms from Neighborhoods
MF GO:0036435 K48-linked polyubiquitin modification-dependent protein binding IEP Predict GO terms from Neighborhoods
CC GO:0036513 Derlin-1 retrotranslocation complex IEP Predict GO terms from Neighborhoods
MF GO:0042287 MHC protein binding IEP Predict GO terms from Neighborhoods
MF GO:0042288 MHC class I protein binding IEP Predict GO terms from Neighborhoods
BP GO:0042726 flavin-containing compound metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0042728 flavin-containing compound catabolic process IEP Predict GO terms from Neighborhoods
MF GO:0043168 anion binding IEP Predict GO terms from Neighborhoods
CC GO:0043228 non-membrane-bounded organelle IEP Predict GO terms from Neighborhoods
CC GO:0043229 intracellular organelle IEP Predict GO terms from Neighborhoods
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Predict GO terms from Neighborhoods
BP GO:0043280 positive regulation of cysteine-type endopeptidase activity involved in apoptotic process IEP Predict GO terms from Neighborhoods
BP GO:0043281 regulation of cysteine-type endopeptidase activity involved in apoptotic process IEP Predict GO terms from Neighborhoods
BP GO:0043457 regulation of cellular respiration IEP Predict GO terms from Neighborhoods
BP GO:0045838 positive regulation of membrane potential IEP Predict GO terms from Neighborhoods
BP GO:0045840 positive regulation of mitotic nuclear division IEP Predict GO terms from Neighborhoods
BP GO:0045842 positive regulation of mitotic metaphase/anaphase transition IEP Predict GO terms from Neighborhoods
BP GO:0045981 positive regulation of nucleotide metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0046685 response to arsenic-containing substance IEP Predict GO terms from Neighborhoods
BP GO:0048254 snoRNA localization IEP Predict GO terms from Neighborhoods
BP GO:0048536 spleen development IEP Predict GO terms from Neighborhoods
BP GO:0048538 thymus development IEP Predict GO terms from Neighborhoods
BP GO:0048794 swim bladder development IEP Predict GO terms from Neighborhoods
MF GO:0050897 cobalt ion binding IEP Predict GO terms from Neighborhoods
BP GO:0051174 regulation of phosphorus metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0051301 cell division IEP Predict GO terms from Neighborhoods
BP GO:0051785 positive regulation of nuclear division IEP Predict GO terms from Neighborhoods
BP GO:0051881 regulation of mitochondrial membrane potential IEP Predict GO terms from Neighborhoods
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP Predict GO terms from Neighborhoods
CC GO:0060205 cytoplasmic vesicle lumen IEP Predict GO terms from Neighborhoods
BP GO:0060322 head development IEP Predict GO terms from Neighborhoods
BP GO:0060465 pharynx development IEP Predict GO terms from Neighborhoods
BP GO:0070125 mitochondrial translational elongation IEP Predict GO terms from Neighborhoods
BP GO:0070841 inclusion body assembly IEP Predict GO terms from Neighborhoods
BP GO:0070842 aggresome assembly IEP Predict GO terms from Neighborhoods
BP GO:0070979 protein K11-linked ubiquitination IEP Predict GO terms from Neighborhoods
BP GO:0071243 cellular response to arsenic-containing substance IEP Predict GO terms from Neighborhoods
BP GO:0072387 flavin adenine dinucleotide metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0072389 flavin adenine dinucleotide catabolic process IEP Predict GO terms from Neighborhoods
CC GO:0072686 mitotic spindle IEP Predict GO terms from Neighborhoods
BP GO:0080186 developmental vegetative growth IEP Predict GO terms from Neighborhoods
BP GO:0090085 regulation of protein deubiquitination IEP Predict GO terms from Neighborhoods
BP GO:0090329 regulation of DNA-templated DNA replication IEP Predict GO terms from Neighborhoods
BP GO:0097065 anterior head development IEP Predict GO terms from Neighborhoods
BP GO:0097352 autophagosome maturation IEP Predict GO terms from Neighborhoods
MF GO:0097367 carbohydrate derivative binding IEP Predict GO terms from Neighborhoods
MF GO:0140098 catalytic activity, acting on RNA IEP Predict GO terms from Neighborhoods
MF GO:0140657 ATP-dependent activity IEP Predict GO terms from Neighborhoods
BP GO:1900371 regulation of purine nucleotide biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1900373 positive regulation of purine nucleotide biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1900542 regulation of purine nucleotide metabolic process IEP Predict GO terms from Neighborhoods
BP GO:1900544 positive regulation of purine nucleotide metabolic process IEP Predict GO terms from Neighborhoods
BP GO:1901970 positive regulation of mitotic sister chromatid separation IEP Predict GO terms from Neighborhoods
BP GO:1902099 regulation of metaphase/anaphase transition of cell cycle IEP Predict GO terms from Neighborhoods
BP GO:1902101 positive regulation of metaphase/anaphase transition of cell cycle IEP Predict GO terms from Neighborhoods
BP GO:1903003 positive regulation of protein deubiquitination IEP Predict GO terms from Neighborhoods
BP GO:1903004 regulation of protein K63-linked deubiquitination IEP Predict GO terms from Neighborhoods
BP GO:1903006 positive regulation of protein K63-linked deubiquitination IEP Predict GO terms from Neighborhoods
BP GO:1903008 organelle disassembly IEP Predict GO terms from Neighborhoods
BP GO:1903513 endoplasmic reticulum to cytosol transport IEP Predict GO terms from Neighborhoods
BP GO:1903578 regulation of ATP metabolic process IEP Predict GO terms from Neighborhoods
BP GO:1903580 positive regulation of ATP metabolic process IEP Predict GO terms from Neighborhoods
BP GO:1903715 regulation of aerobic respiration IEP Predict GO terms from Neighborhoods
BP GO:1903842 response to arsenite ion IEP Predict GO terms from Neighborhoods
BP GO:1903843 cellular response to arsenite ion IEP Predict GO terms from Neighborhoods
MF GO:1904288 BAT3 complex binding IEP Predict GO terms from Neighborhoods
CC GO:1904813 ficolin-1-rich granule lumen IEP Predict GO terms from Neighborhoods
BP GO:1905634 regulation of protein localization to chromatin IEP Predict GO terms from Neighborhoods
BP GO:1905818 regulation of chromosome separation IEP Predict GO terms from Neighborhoods
BP GO:1905820 positive regulation of chromosome separation IEP Predict GO terms from Neighborhoods
MF GO:1990381 ubiquitin-specific protease binding IEP Predict GO terms from Neighborhoods
CC GO:1990730 VCP-NSFL1C complex IEP Predict GO terms from Neighborhoods
BP GO:2000116 regulation of cysteine-type endopeptidase activity IEP Predict GO terms from Neighborhoods
BP GO:2001056 positive regulation of cysteine-type endopeptidase activity IEP Predict GO terms from Neighborhoods
BP GO:2001169 regulation of ATP biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:2001171 positive regulation of ATP biosynthetic process IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR009723 Pop1_N 120 177
IPR012590 POPLD_dom 492 568
No external refs found!