Description : Dead box ATP-dependent RNA helicase, putative
Gene families : OG_02_0021136 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000036541 | |
| Cluster | HCCA Clusters (HRR 50 & PCC 0.5): Cluster_65 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000027 | ribosomal large subunit assembly | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0000049 | tRNA binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0000054 | ribosomal subunit export from nucleus | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0000055 | ribosomal large subunit export from nucleus | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0000176 | nuclear exosome (RNase complex) | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0000178 | exosome (RNase complex) | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0000315 | organellar large ribosomal subunit | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0000447 | endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0000462 | maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0000469 | cleavage involved in rRNA processing | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0000478 | endonucleolytic cleavage involved in rRNA processing | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0000479 | endonucleolytic cleavage of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0000480 | endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0000737 | DNA catabolic process, endonucleolytic | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0000738 | DNA catabolic process, exonucleolytic | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0001569 | branching involved in blood vessel morphogenesis | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0001818 | negative regulation of cytokine production | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0001825 | blastocyst formation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0001836 | release of cytochrome c from mitochondria | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0001944 | vasculature development | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0003723 | RNA binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0004518 | nuclease activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0004519 | endonuclease activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0004521 | endoribonuclease activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0004527 | exonuclease activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0004725 | protein tyrosine phosphatase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0004812 | aminoacyl-tRNA ligase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0004828 | serine-tRNA ligase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0005048 | signal sequence binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0005126 | cytokine receptor binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0005134 | interleukin-2 receptor binding | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0005575 | cellular_component | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0005654 | nucleoplasm | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0005656 | nuclear pre-replicative complex | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0005730 | nucleolus | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0005744 | TIM23 mitochondrial import inner membrane translocase complex | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0005762 | mitochondrial large ribosomal subunit | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006308 | DNA catabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006364 | rRNA processing | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006396 | RNA processing | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006412 | translation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006418 | tRNA aminoacylation for protein translation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006434 | seryl-tRNA aminoacylation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006518 | peptide metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006821 | chloride transport | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006839 | mitochondrial transport | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006884 | cell volume homeostasis | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0007006 | mitochondrial membrane organization | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0008320 | protein transmembrane transporter activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0008408 | 3'-5' exonuclease activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0008630 | intrinsic apoptotic signaling pathway in response to DNA damage | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0008637 | apoptotic mitochondrial changes | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009987 | cellular process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010073 | meristem maintenance | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010449 | root meristem growth | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010574 | regulation of vascular endothelial growth factor production | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0016070 | RNA metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0016072 | rRNA metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0016525 | negative regulation of angiogenesis | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0016604 | nuclear body | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0016607 | nuclear speck | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0016788 | hydrolase activity, acting on ester bonds | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0016875 | ligase activity, forming carbon-oxygen bonds | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0019843 | rRNA binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0022884 | macromolecule transmembrane transporter activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0030150 | protein import into mitochondrial matrix | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0030174 | regulation of DNA-templated DNA replication initiation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0030490 | maturation of SSU-rRNA | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0030943 | mitochondrion targeting sequence binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0032092 | positive regulation of protein binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0032268 | regulation of cellular protein metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0032879 | regulation of localization | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0032991 | protein-containing complex | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0033750 | ribosome localization | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0034470 | ncRNA processing | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0034660 | ncRNA metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0035266 | meristem growth | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0036387 | pre-replicative complex | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0042273 | ribosomal large subunit biogenesis | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0042771 | intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0043021 | ribonucleoprotein complex binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0043023 | ribosomal large subunit binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0043038 | amino acid activation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0043039 | tRNA aminoacylation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0043043 | peptide biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0043170 | macromolecule metabolic process | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0043228 | non-membrane-bounded organelle | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0043604 | amide biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0044743 | protein transmembrane import into intracellular organelle | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0045292 | mRNA cis splicing, via spliceosome | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0045765 | regulation of angiogenesis | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0045794 | negative regulation of cell volume | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0046483 | heterocycle metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0046902 | regulation of mitochondrial membrane permeability | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0048754 | branching morphogenesis of an epithelial tube | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0061138 | morphogenesis of a branching epithelium | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0061300 | cerebellum vasculature development | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0065002 | intracellular protein transmembrane transport | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0070180 | large ribosomal subunit rRNA binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0070585 | protein localization to mitochondrion | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0070851 | growth factor receptor binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0072331 | signal transduction by p53 class mediator | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0072332 | intrinsic apoptotic signaling pathway by p53 class mediator | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0072655 | establishment of protein localization to mitochondrion | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0090305 | nucleic acid phosphodiester bond hydrolysis | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0090329 | regulation of DNA-templated DNA replication | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0090501 | RNA phosphodiester bond hydrolysis | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0090502 | RNA phosphodiester bond hydrolysis, endonucleolytic | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0090559 | regulation of membrane permeability | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0097056 | selenocysteinyl-tRNA(Sec) biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0097193 | intrinsic apoptotic signaling pathway | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0097344 | Rix1 complex | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0098798 | mitochondrial protein-containing complex | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0140098 | catalytic activity, acting on RNA | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0140318 | protein transporter activity | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0140513 | nuclear protein-containing complex | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1900180 | regulation of protein localization to nucleus | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1900182 | positive regulation of protein localization to nucleus | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1901342 | regulation of vasculature development | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1901343 | negative regulation of vasculature development | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1902183 | regulation of shoot apical meristem development | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1902184 | negative regulation of shoot apical meristem development | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1903670 | regulation of sprouting angiogenesis | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1903671 | negative regulation of sprouting angiogenesis | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1904046 | negative regulation of vascular endothelial growth factor production | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1904749 | regulation of protein localization to nucleolus | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1904751 | positive regulation of protein localization to nucleolus | IEP | Predict GO terms from Neighborhoods |
| CC | GO:1905354 | exoribonuclease complex | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1990542 | mitochondrial transmembrane transport | IEP | Predict GO terms from Neighborhoods |
| BP | GO:2000181 | negative regulation of blood vessel morphogenesis | IEP | Predict GO terms from Neighborhoods |
| No external refs found! |