SOLTUB.AGRIA.G00000003683


Description : transmembrane protein


Gene families : OG_02_0018324 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000003683
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_56


Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
CC GO:0000159 protein phosphatase type 2A complex IEP Predict GO terms from Neighborhoods
MF GO:0000175 3'-5'-exoribonuclease activity IEP Predict GO terms from Neighborhoods
BP GO:0000289 nuclear-transcribed mRNA poly(A) tail shortening IEP Predict GO terms from Neighborhoods
CC GO:0000306 extrinsic component of vacuolar membrane IEP Predict GO terms from Neighborhoods
CC GO:0000779 condensed chromosome, centromeric region IEP Predict GO terms from Neighborhoods
BP GO:0000819 sister chromatid segregation IEP Predict GO terms from Neighborhoods
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP Predict GO terms from Neighborhoods
MF GO:0001221 transcription coregulator binding IEP Predict GO terms from Neighborhoods
MF GO:0001222 transcription corepressor binding IEP Predict GO terms from Neighborhoods
BP GO:0001666 response to hypoxia IEP Predict GO terms from Neighborhoods
BP GO:0001778 plasma membrane repair IEP Predict GO terms from Neighborhoods
BP GO:0001829 trophectodermal cell differentiation IEP Predict GO terms from Neighborhoods
BP GO:0001909 leukocyte mediated cytotoxicity IEP Predict GO terms from Neighborhoods
BP GO:0002228 natural killer cell mediated immunity IEP Predict GO terms from Neighborhoods
BP GO:0002443 leukocyte mediated immunity IEP Predict GO terms from Neighborhoods
BP GO:0002449 lymphocyte mediated immunity IEP Predict GO terms from Neighborhoods
BP GO:0002504 antigen processing and presentation of peptide or polysaccharide antigen via MHC class II IEP Predict GO terms from Neighborhoods
BP GO:0002505 antigen processing and presentation of polysaccharide antigen via MHC class II IEP Predict GO terms from Neighborhoods
BP GO:0002683 negative regulation of immune system process IEP Predict GO terms from Neighborhoods
BP GO:0002747 antigen processing and presentation following phagocytosis IEP Predict GO terms from Neighborhoods
BP GO:0002832 negative regulation of response to biotic stimulus IEP Predict GO terms from Neighborhoods
BP GO:0003032 detection of oxygen IEP Predict GO terms from Neighborhoods
MF GO:0003925 G protein activity IEP Predict GO terms from Neighborhoods
MF GO:0004430 1-phosphatidylinositol 4-kinase activity IEP Predict GO terms from Neighborhoods
MF GO:0004532 exoribonuclease activity IEP Predict GO terms from Neighborhoods
MF GO:0004535 poly(A)-specific ribonuclease activity IEP Predict GO terms from Neighborhoods
MF GO:0004652 polynucleotide adenylyltransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0004656 procollagen-proline 4-dioxygenase activity IEP Predict GO terms from Neighborhoods
MF GO:0005506 iron ion binding IEP Predict GO terms from Neighborhoods
CC GO:0005847 mRNA cleavage and polyadenylation specificity factor complex IEP Predict GO terms from Neighborhoods
CC GO:0005849 mRNA cleavage factor complex IEP Predict GO terms from Neighborhoods
BP GO:0006378 mRNA polyadenylation IEP Predict GO terms from Neighborhoods
BP GO:0006401 RNA catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006402 mRNA catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006555 methionine metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006807 nitrogen compound metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006836 neurotransmitter transport IEP Predict GO terms from Neighborhoods
BP GO:0006977 DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest IEP Predict GO terms from Neighborhoods
BP GO:0007009 plasma membrane organization IEP Predict GO terms from Neighborhoods
BP GO:0007129 homologous chromosome pairing at meiosis IEP Predict GO terms from Neighborhoods
BP GO:0007269 neurotransmitter secretion IEP Predict GO terms from Neighborhoods
BP GO:0007431 salivary gland development IEP Predict GO terms from Neighborhoods
BP GO:0007444 imaginal disc development IEP Predict GO terms from Neighborhoods
BP GO:0008089 anterograde axonal transport IEP Predict GO terms from Neighborhoods
BP GO:0008285 negative regulation of cell population proliferation IEP Predict GO terms from Neighborhoods
BP GO:0008333 endosome to lysosome transport IEP Predict GO terms from Neighborhoods
BP GO:0008406 gonad development IEP Predict GO terms from Neighborhoods
BP GO:0008584 male gonad development IEP Predict GO terms from Neighborhoods
BP GO:0008630 intrinsic apoptotic signaling pathway in response to DNA damage IEP Predict GO terms from Neighborhoods
BP GO:0009057 macromolecule catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009061 anaerobic respiration IEP Predict GO terms from Neighborhoods
BP GO:0009554 megasporogenesis IEP Predict GO terms from Neighborhoods
BP GO:0009968 negative regulation of signal transduction IEP Predict GO terms from Neighborhoods
BP GO:0010555 response to mannitol IEP Predict GO terms from Neighborhoods
BP GO:0010603 regulation of cytoplasmic mRNA processing body assembly IEP Predict GO terms from Neighborhoods
BP GO:0010606 positive regulation of cytoplasmic mRNA processing body assembly IEP Predict GO terms from Neighborhoods
BP GO:0010648 negative regulation of cell communication IEP Predict GO terms from Neighborhoods
BP GO:0010977 negative regulation of neuron projection development IEP Predict GO terms from Neighborhoods
BP GO:0015074 DNA integration IEP Predict GO terms from Neighborhoods
BP GO:0016074 sno(s)RNA metabolic process IEP Predict GO terms from Neighborhoods
MF GO:0016157 sucrose synthase activity IEP Predict GO terms from Neighborhoods
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Predict GO terms from Neighborhoods
MF GO:0016896 exoribonuclease activity, producing 5'-phosphomonoesters IEP Predict GO terms from Neighborhoods
BP GO:0017156 calcium-ion regulated exocytosis IEP Predict GO terms from Neighborhoods
BP GO:0018126 protein hydroxylation IEP Predict GO terms from Neighborhoods
BP GO:0018158 protein oxidation IEP Predict GO terms from Neighborhoods
BP GO:0018171 peptidyl-cysteine oxidation IEP Predict GO terms from Neighborhoods
BP GO:0018198 peptidyl-cysteine modification IEP Predict GO terms from Neighborhoods
BP GO:0018401 peptidyl-proline hydroxylation to 4-hydroxy-L-proline IEP Predict GO terms from Neighborhoods
BP GO:0019076 viral release from host cell IEP Predict GO terms from Neighborhoods
MF GO:0019211 phosphatase activator activity IEP Predict GO terms from Neighborhoods
BP GO:0019511 peptidyl-proline hydroxylation IEP Predict GO terms from Neighborhoods
BP GO:0019538 protein metabolic process IEP Predict GO terms from Neighborhoods
MF GO:0019798 procollagen-proline dioxygenase activity IEP Predict GO terms from Neighborhoods
BP GO:0019882 antigen processing and presentation IEP Predict GO terms from Neighborhoods
CC GO:0019898 extrinsic component of membrane IEP Predict GO terms from Neighborhoods
BP GO:0019941 modification-dependent protein catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0023057 negative regulation of signaling IEP Predict GO terms from Neighborhoods
CC GO:0030015 CCR4-NOT core complex IEP Predict GO terms from Neighborhoods
CC GO:0030018 Z disc IEP Predict GO terms from Neighborhoods
BP GO:0030301 cholesterol transport IEP Predict GO terms from Neighborhoods
BP GO:0030330 DNA damage response, signal transduction by p53 class mediator IEP Predict GO terms from Neighborhoods
BP GO:0030517 negative regulation of axon extension IEP Predict GO terms from Neighborhoods
BP GO:0031126 sno(s)RNA 3'-end processing IEP Predict GO terms from Neighborhoods
MF GO:0031418 L-ascorbic acid binding IEP Predict GO terms from Neighborhoods
CC GO:0031430 M band IEP Predict GO terms from Neighborhoods
BP GO:0031440 regulation of mRNA 3'-end processing IEP Predict GO terms from Neighborhoods
BP GO:0031539 positive regulation of anthocyanin metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0031542 positive regulation of anthocyanin biosynthetic process IEP Predict GO terms from Neighborhoods
MF GO:0031543 peptidyl-proline dioxygenase activity IEP Predict GO terms from Neighborhoods
MF GO:0031545 peptidyl-proline 4-dioxygenase activity IEP Predict GO terms from Neighborhoods
BP GO:0031571 mitotic G1 DNA damage checkpoint signaling IEP Predict GO terms from Neighborhoods
BP GO:0031998 regulation of fatty acid beta-oxidation IEP Predict GO terms from Neighborhoods
BP GO:0032000 positive regulation of fatty acid beta-oxidation IEP Predict GO terms from Neighborhoods
BP GO:0032102 negative regulation of response to external stimulus IEP Predict GO terms from Neighborhoods
BP GO:0032365 intracellular lipid transport IEP Predict GO terms from Neighborhoods
BP GO:0032366 intracellular sterol transport IEP Predict GO terms from Neighborhoods
BP GO:0032367 intracellular cholesterol transport IEP Predict GO terms from Neighborhoods
BP GO:0032418 lysosome localization IEP Predict GO terms from Neighborhoods
CC GO:0032419 extrinsic component of lysosome membrane IEP Predict GO terms from Neighborhoods
MF GO:0032452 histone demethylase activity IEP Predict GO terms from Neighborhoods
MF GO:0032454 histone H3-methyl-lysine-9 demethylase activity IEP Predict GO terms from Neighborhoods
CC GO:0032838 plasma membrane bounded cell projection cytoplasm IEP Predict GO terms from Neighborhoods
BP GO:0033144 negative regulation of intracellular steroid hormone receptor signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0033146 regulation of intracellular estrogen receptor signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0033147 negative regulation of intracellular estrogen receptor signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0033227 dsRNA transport IEP Predict GO terms from Neighborhoods
BP GO:0033353 S-adenosylmethionine cycle IEP Predict GO terms from Neighborhoods
BP GO:0033363 secretory granule organization IEP Predict GO terms from Neighborhoods
CC GO:0033620 Mei2 nuclear dot complex IEP Predict GO terms from Neighborhoods
BP GO:0033621 nuclear-transcribed mRNA catabolic process, meiosis-specific transcripts IEP Predict GO terms from Neighborhoods
BP GO:0034067 protein localization to Golgi apparatus IEP Predict GO terms from Neighborhoods
BP GO:0034264 isopentenyl adenine metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0034265 isopentenyl adenine biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0034655 nucleobase-containing compound catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0035220 wing disc development IEP Predict GO terms from Neighborhoods
BP GO:0035306 positive regulation of dephosphorylation IEP Predict GO terms from Neighborhoods
BP GO:0035307 positive regulation of protein dephosphorylation IEP Predict GO terms from Neighborhoods
BP GO:0035891 exit from host cell IEP Predict GO terms from Neighborhoods
MF GO:0036094 small molecule binding IEP Predict GO terms from Neighborhoods
BP GO:0036211 protein modification process IEP Predict GO terms from Neighborhoods
BP GO:0036293 response to decreased oxygen levels IEP Predict GO terms from Neighborhoods
BP GO:0042267 natural killer cell mediated cytotoxicity IEP Predict GO terms from Neighborhoods
BP GO:0042273 ribosomal large subunit biogenesis IEP Predict GO terms from Neighborhoods
BP GO:0042710 biofilm formation IEP Predict GO terms from Neighborhoods
BP GO:0042771 intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator IEP Predict GO terms from Neighborhoods
MF GO:0043014 alpha-tubulin binding IEP Predict GO terms from Neighborhoods
BP GO:0043144 sno(s)RNA processing IEP Predict GO terms from Neighborhoods
MF GO:0043167 ion binding IEP Predict GO terms from Neighborhoods
MF GO:0043169 cation binding IEP Predict GO terms from Neighborhoods
BP GO:0043170 macromolecule metabolic process IEP Predict GO terms from Neighborhoods
CC GO:0043195 terminal bouton IEP Predict GO terms from Neighborhoods
CC GO:0043204 perikaryon IEP Predict GO terms from Neighborhoods
BP GO:0043412 macromolecule modification IEP Predict GO terms from Neighborhoods
MF GO:0043424 protein histidine kinase binding IEP Predict GO terms from Neighborhoods
BP GO:0043550 regulation of lipid kinase activity IEP Predict GO terms from Neighborhoods
BP GO:0043628 small regulatory ncRNA 3'-end processing IEP Predict GO terms from Neighborhoods
BP GO:0043629 ncRNA polyadenylation IEP Predict GO terms from Neighborhoods
BP GO:0043631 RNA polyadenylation IEP Predict GO terms from Neighborhoods
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0043666 regulation of phosphoprotein phosphatase activity IEP Predict GO terms from Neighborhoods
BP GO:0044010 single-species biofilm formation IEP Predict GO terms from Neighborhoods
BP GO:0044011 single-species biofilm formation on inanimate substrate IEP Predict GO terms from Neighborhoods
BP GO:0044089 positive regulation of cellular component biogenesis IEP Predict GO terms from Neighborhoods
BP GO:0044238 primary metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0044260 cellular macromolecule metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0044265 cellular macromolecule catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0044819 mitotic G1/S transition checkpoint signaling IEP Predict GO terms from Neighborhoods
BP GO:0045055 regulated exocytosis IEP Predict GO terms from Neighborhoods
BP GO:0045824 negative regulation of innate immune response IEP Predict GO terms from Neighborhoods
BP GO:0046320 regulation of fatty acid oxidation IEP Predict GO terms from Neighborhoods
BP GO:0046321 positive regulation of fatty acid oxidation IEP Predict GO terms from Neighborhoods
BP GO:0046500 S-adenosylmethionine metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0046753 non-lytic viral release IEP Predict GO terms from Neighborhoods
BP GO:0046754 viral exocytosis IEP Predict GO terms from Neighborhoods
BP GO:0046854 phosphatidylinositol phosphate biosynthetic process IEP Predict GO terms from Neighborhoods
MF GO:0046872 metal ion binding IEP Predict GO terms from Neighborhoods
MF GO:0046914 transition metal ion binding IEP Predict GO terms from Neighborhoods
BP GO:0048449 floral organ formation IEP Predict GO terms from Neighborhoods
BP GO:0048451 petal formation IEP Predict GO terms from Neighborhoods
MF GO:0048487 beta-tubulin binding IEP Predict GO terms from Neighborhoods
BP GO:0048585 negative regulation of response to stimulus IEP Predict GO terms from Neighborhoods
CC GO:0048786 presynaptic active zone IEP Predict GO terms from Neighborhoods
BP GO:0050768 negative regulation of neurogenesis IEP Predict GO terms from Neighborhoods
BP GO:0050771 negative regulation of axonogenesis IEP Predict GO terms from Neighborhoods
BP GO:0050777 negative regulation of immune response IEP Predict GO terms from Neighborhoods
BP GO:0050994 regulation of lipid catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0050996 positive regulation of lipid catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0051177 meiotic sister chromatid cohesion IEP Predict GO terms from Neighborhoods
MF GO:0051213 dioxygenase activity IEP Predict GO terms from Neighborhoods
CC GO:0051233 spindle midzone IEP Predict GO terms from Neighborhoods
BP GO:0051276 chromosome organization IEP Predict GO terms from Neighborhoods
BP GO:0051603 proteolysis involved in protein catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0051961 negative regulation of nervous system development IEP Predict GO terms from Neighborhoods
BP GO:0051963 regulation of synapse assembly IEP Predict GO terms from Neighborhoods
BP GO:0051965 positive regulation of synapse assembly IEP Predict GO terms from Neighborhoods
MF GO:0052742 phosphatidylinositol kinase activity IEP Predict GO terms from Neighborhoods
BP GO:0060628 regulation of ER to Golgi vesicle-mediated transport IEP Predict GO terms from Neighborhoods
BP GO:0060776 simple leaf morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0060969 obsolete negative regulation of gene silencing IEP Predict GO terms from Neighborhoods
BP GO:0061909 autophagosome-lysosome fusion IEP Predict GO terms from Neighborhoods
BP GO:0070192 chromosome organization involved in meiotic cell cycle IEP Predict GO terms from Neighborhoods
BP GO:0070482 response to oxygen levels IEP Predict GO terms from Neighborhoods
BP GO:0070483 detection of hypoxia IEP Predict GO terms from Neighborhoods
MF GO:0070566 adenylyltransferase activity IEP Predict GO terms from Neighborhoods
BP GO:0070861 regulation of protein exit from endoplasmic reticulum IEP Predict GO terms from Neighborhoods
BP GO:0071050 sno(s)RNA polyadenylation IEP Predict GO terms from Neighborhoods
BP GO:0072331 signal transduction by p53 class mediator IEP Predict GO terms from Neighborhoods
BP GO:0072332 intrinsic apoptotic signaling pathway by p53 class mediator IEP Predict GO terms from Neighborhoods
MF GO:0072542 protein phosphatase activator activity IEP Predict GO terms from Neighborhoods
BP GO:0080006 internode patterning IEP Predict GO terms from Neighborhoods
BP GO:0080183 response to photooxidative stress IEP Predict GO terms from Neighborhoods
BP GO:0090101 negative regulation of transmembrane receptor protein serine/threonine kinase signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0090117 endosome to lysosome transport of low-density lipoprotein particle IEP Predict GO terms from Neighborhoods
BP GO:0090119 vesicle-mediated cholesterol transport IEP Predict GO terms from Neighborhoods
BP GO:0090158 endoplasmic reticulum membrane organization IEP Predict GO terms from Neighborhoods
BP GO:0090219 negative regulation of lipid kinase activity IEP Predict GO terms from Neighborhoods
BP GO:0090227 regulation of red or far-red light signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0090229 negative regulation of red or far-red light signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0090342 obsolete regulation of cell aging IEP Predict GO terms from Neighborhoods
BP GO:0090385 phagosome-lysosome fusion IEP Predict GO terms from Neighborhoods
BP GO:0090605 submerged biofilm formation IEP Predict GO terms from Neighborhoods
BP GO:0090609 single-species submerged biofilm formation IEP Predict GO terms from Neighborhoods
MF GO:0097159 organic cyclic compound binding IEP Predict GO terms from Neighborhoods
BP GO:0098630 aggregation of unicellular organisms IEP Predict GO terms from Neighborhoods
BP GO:0098743 cell aggregation IEP Predict GO terms from Neighborhoods
MF GO:0098772 molecular function regulator activity IEP Predict GO terms from Neighborhoods
BP GO:0098930 axonal transport IEP Predict GO terms from Neighborhoods
BP GO:0099054 presynapse assembly IEP Predict GO terms from Neighborhoods
BP GO:0099172 presynapse organization IEP Predict GO terms from Neighborhoods
BP GO:0099643 signal release from synapse IEP Predict GO terms from Neighborhoods
CC GO:0101004 cytolytic granule membrane IEP Predict GO terms from Neighborhoods
CC GO:0120111 neuron projection cytoplasm IEP Predict GO terms from Neighborhoods
MF GO:0140457 protein demethylase activity IEP Predict GO terms from Neighborhoods
BP GO:1900458 negative regulation of brassinosteroid mediated signaling pathway IEP Predict GO terms from Neighborhoods
MF GO:1901363 heterocyclic compound binding IEP Predict GO terms from Neighborhoods
BP GO:1901888 regulation of cell junction assembly IEP Predict GO terms from Neighborhoods
BP GO:1901890 positive regulation of cell junction assembly IEP Predict GO terms from Neighborhoods
BP GO:1902117 positive regulation of organelle assembly IEP Predict GO terms from Neighborhoods
BP GO:1902774 late endosome to lysosome transport IEP Predict GO terms from Neighborhoods
BP GO:1902807 negative regulation of cell cycle G1/S phase transition IEP Predict GO terms from Neighborhoods
BP GO:1903077 negative regulation of protein localization to plasma membrane IEP Predict GO terms from Neighborhoods
BP GO:1903292 protein localization to Golgi membrane IEP Predict GO terms from Neighborhoods
CC GO:1904115 axon cytoplasm IEP Predict GO terms from Neighborhoods
BP GO:1904376 negative regulation of protein localization to cell periphery IEP Predict GO terms from Neighborhoods
BP GO:1905476 negative regulation of protein localization to membrane IEP Predict GO terms from Neighborhoods
CC GO:1990027 S bouton IEP Predict GO terms from Neighborhoods
CC GO:1990251 nuclear exosome focus IEP Predict GO terms from Neighborhoods
BP GO:1990849 vacuolar localization IEP Predict GO terms from Neighborhoods
BP GO:1990927 calcium ion regulated lysosome exocytosis IEP Predict GO terms from Neighborhoods
BP GO:2000036 regulation of stem cell population maintenance IEP Predict GO terms from Neighborhoods
BP GO:2000134 negative regulation of G1/S transition of mitotic cell cycle IEP Predict GO terms from Neighborhoods

No InterPro domains available for this sequence

No external refs found!