SOLTUB.AGRIA.G00000037160

Description : Beta-galactosidase

Gene families : OG_02_0002299 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000037160
Cluster	HCCA Clusters (HRR 50 & PCC 0.5): Cluster_68

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	None	Extended
MF	GO:0004565	beta-galactosidase activity	IEA	AHRD
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005576	extracellular region	None	Extended
CC	GO:0005618	cell wall	None	Extended
CC	GO:0005773	vacuole	IEA	AHRD
CC	GO:0005911	cell-cell junction	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
CC	GO:0009505	plant-type cell wall	IEA	AHRD
CC	GO:0009506	plasmodesma	IEA	AHRD
BP	GO:0009664	plant-type cell wall organization	None	Extended
BP	GO:0009827	plant-type cell wall modification	IEA	AHRD
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010191	mucilage metabolic process	None	Extended
BP	GO:0010192	mucilage biosynthetic process	None	Extended
MF	GO:0015925	galactosidase activity	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	None	Extended
BP	GO:0022414	reproductive process	None	Extended
CC	GO:0030054	cell junction	None	Extended
CC	GO:0030312	external encapsulating structure	None	Extended
BP	GO:0042545	cell wall modification	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0045229	external encapsulating structure organization	None	Extended
CC	GO:0048046	apoplast	IEA	AHRD
BP	GO:0048354	mucilage biosynthetic process involved in seed coat development	IEA	AHRD
BP	GO:0048359	mucilage metabolic process involved in seed coat development	None	Extended
CC	GO:0070161	anchoring junction	None	Extended
BP	GO:0071554	cell wall organization or biogenesis	None	Extended
BP	GO:0071555	cell wall organization	None	Extended
BP	GO:0071669	plant-type cell wall organization or biogenesis	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000271	polysaccharide biosynthetic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0003779	actin binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0005522	profilin binding	IEP	Predict GO terms from Neighborhoods
CC	GO:0005819	spindle	IEP	Predict GO terms from Neighborhoods
BP	GO:0006073	cellular glucan metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0007015	actin filament organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0008064	regulation of actin polymerization or depolymerization	IEP	Predict GO terms from Neighborhoods
BP	GO:0009250	glucan biosynthetic process	IEP	Predict GO terms from Neighborhoods
CC	GO:0009524	phragmoplast	IEP	Predict GO terms from Neighborhoods
BP	GO:0009825	multidimensional cell growth	IEP	Predict GO terms from Neighborhoods
BP	GO:0009832	plant-type cell wall biogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0009834	plant-type secondary cell wall biogenesis	IEP	Predict GO terms from Neighborhoods
CC	GO:0009897	external side of plasma membrane	IEP	Predict GO terms from Neighborhoods
CC	GO:0009930	longitudinal side of cell surface	IEP	Predict GO terms from Neighborhoods
BP	GO:0009960	endosperm development	IEP	Predict GO terms from Neighborhoods
BP	GO:0010215	cellulose microfibril organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0010383	cell wall polysaccharide metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0010496	intercellular transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0010497	plasmodesmata-mediated intercellular transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0010639	negative regulation of organelle organization	IEP	Predict GO terms from Neighborhoods
CC	GO:0016021	integral component of membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0016049	cell growth	IEP	Predict GO terms from Neighborhoods
CC	GO:0016328	lateral plasma membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0030198	extracellular matrix organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0030243	cellulose metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0030244	cellulose biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0030832	regulation of actin filament length	IEP	Predict GO terms from Neighborhoods
BP	GO:0030833	regulation of actin filament polymerization	IEP	Predict GO terms from Neighborhoods
BP	GO:0030834	regulation of actin filament depolymerization	IEP	Predict GO terms from Neighborhoods
BP	GO:0030835	negative regulation of actin filament depolymerization	IEP	Predict GO terms from Neighborhoods
BP	GO:0030837	negative regulation of actin filament polymerization	IEP	Predict GO terms from Neighborhoods
CC	GO:0031225	anchored component of membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0031333	negative regulation of protein-containing complex assembly	IEP	Predict GO terms from Neighborhoods
BP	GO:0032271	regulation of protein polymerization	IEP	Predict GO terms from Neighborhoods
BP	GO:0032272	negative regulation of protein polymerization	IEP	Predict GO terms from Neighborhoods
BP	GO:0032535	regulation of cellular component size	IEP	Predict GO terms from Neighborhoods
BP	GO:0032956	regulation of actin cytoskeleton organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0032970	regulation of actin filament-based process	IEP	Predict GO terms from Neighborhoods
BP	GO:0033692	cellular polysaccharide biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0034406	cell wall beta-glucan metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0034410	cell wall beta-glucan biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0034637	cellular carbohydrate biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0040007	growth	IEP	Predict GO terms from Neighborhoods
BP	GO:0043062	extracellular structure organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0043242	negative regulation of protein-containing complex disassembly	IEP	Predict GO terms from Neighborhoods
BP	GO:0043244	regulation of protein-containing complex disassembly	IEP	Predict GO terms from Neighborhoods
BP	GO:0043254	regulation of protein-containing complex assembly	IEP	Predict GO terms from Neighborhoods
BP	GO:0044036	cell wall macromolecule metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0044038	cell wall macromolecule biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0044042	glucan metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0045010	actin nucleation	IEP	Predict GO terms from Neighborhoods
CC	GO:0046658	anchored component of plasma membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0048317	seed morphogenesis	IEP	Predict GO terms from Neighborhoods
MF	GO:0051015	actin filament binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0051016	barbed-end actin filament capping	IEP	Predict GO terms from Neighborhoods
BP	GO:0051273	beta-glucan metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0051274	beta-glucan biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0051493	regulation of cytoskeleton organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0051494	negative regulation of cytoskeleton organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0051693	actin filament capping	IEP	Predict GO terms from Neighborhoods
BP	GO:0052324	plant-type cell wall cellulose biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0052541	plant-type cell wall cellulose metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0070589	cellular component macromolecule biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0070592	cell wall polysaccharide biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0090066	regulation of anatomical structure size	IEP	Predict GO terms from Neighborhoods
BP	GO:0097435	supramolecular fiber organization	IEP	Predict GO terms from Neighborhoods
CC	GO:0098552	side of membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0110053	regulation of actin filament organization	IEP	Predict GO terms from Neighborhoods
BP	GO:1901879	regulation of protein depolymerization	IEP	Predict GO terms from Neighborhoods
BP	GO:1901880	negative regulation of protein depolymerization	IEP	Predict GO terms from Neighborhoods
BP	GO:1902903	regulation of supramolecular fiber organization	IEP	Predict GO terms from Neighborhoods
BP	GO:1902904	negative regulation of supramolecular fiber organization	IEP	Predict GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR008979	Galactose-bd-like_sf	577	698
IPR041392	GHD	353	418
IPR031330	Gly_Hdrlase_35_cat	32	339
IPR008979	Galactose-bd-like_sf	402	552
IPR017853	Glycoside_hydrolase_SF	23	343

External Links

No external refs found!

SOLTUB.AGRIA.G00000037160

Expression Profile

Co-expression Networks

Functional Annotation