Description : RING/U-box superfamily protein
Gene families : OG_02_0003154 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000037823 | |
| Cluster | HCCA Clusters (HRR 50 & PCC 0.5): Cluster_16 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000184 | nuclear-transcribed mRNA catabolic process, nonsense-mediated decay | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0000228 | nuclear chromosome | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0000793 | condensed chromosome | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0000794 | condensed nuclear chromosome | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0000922 | spindle pole | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0000956 | nuclear-transcribed mRNA catabolic process | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0001221 | transcription coregulator binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0001223 | transcription coactivator binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0001701 | in utero embryonic development | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0002181 | cytoplasmic translation | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0003684 | damaged DNA binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0003723 | RNA binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0003724 | RNA helicase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0003729 | mRNA binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0003735 | structural constituent of ribosome | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0005198 | structural molecule activity | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0005654 | nucleoplasm | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0005686 | U2 snRNP | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006412 | translation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006513 | protein monoubiquitination | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006518 | peptide metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006888 | endoplasmic reticulum to Golgi vesicle-mediated transport | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006915 | apoptotic process | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0008186 | ATP-dependent activity, acting on RNA | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009059 | macromolecule biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009867 | jasmonic acid mediated signaling pathway | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009894 | regulation of catabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010390 | histone monoubiquitination | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0015934 | large ribosomal subunit | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0016574 | histone ubiquitination | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0017022 | myosin binding | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0019005 | SCF ubiquitin ligase complex | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0022625 | cytosolic large ribosomal subunit | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0030099 | myeloid cell differentiation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0030218 | erythrocyte differentiation | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0030532 | small nuclear ribonucleoprotein complex | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0030684 | preribosome | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0030687 | preribosome, large subunit precursor | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0031397 | negative regulation of protein ubiquitination | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0031464 | Cul4A-RING E3 ubiquitin ligase complex | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0031465 | Cul4B-RING E3 ubiquitin ligase complex | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0031514 | motile cilium | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0031625 | ubiquitin protein ligase binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0031960 | response to corticosteroid | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0032986 | protein-DNA complex disassembly | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0033522 | histone H2A ubiquitination | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0034644 | cellular response to UV | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0035518 | histone H2A monoubiquitination | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0042254 | ribosome biogenesis | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0043043 | peptide biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0043228 | non-membrane-bounded organelle | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0043603 | cellular amide metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0043604 | amide biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0044260 | cellular macromolecule metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0044265 | cellular macromolecule catabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0044389 | ubiquitin-like protein ligase binding | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0044391 | ribosomal subunit | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0046677 | response to antibiotic | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0048545 | response to steroid hormone | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0048571 | long-day photoperiodism | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051348 | negative regulation of transferase activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051385 | response to mineralocorticoid | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051438 | regulation of ubiquitin-protein transferase activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051444 | negative regulation of ubiquitin-protein transferase activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051726 | regulation of cell cycle | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0055105 | ubiquitin-protein transferase inhibitor activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0055106 | ubiquitin-protein transferase regulator activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0070180 | large ribosomal subunit rRNA binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0070914 | UV-damage excision repair | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0071236 | cellular response to antibiotic | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0072716 | response to actinomycin D | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0072717 | cellular response to actinomycin D | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0080008 | Cul4-RING E3 ubiquitin ligase complex | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0097525 | spliceosomal snRNP complex | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0098552 | side of membrane | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0098554 | cytoplasmic side of endoplasmic reticulum membrane | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0098556 | cytoplasmic side of rough endoplasmic reticulum membrane | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0098562 | cytoplasmic side of membrane | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0120114 | Sm-like protein family complex | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1900087 | positive regulation of G1/S transition of mitotic cell cycle | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1901653 | cellular response to peptide | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1901796 | regulation of signal transduction by p53 class mediator | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1901798 | positive regulation of signal transduction by p53 class mediator | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1901992 | positive regulation of mitotic cell cycle phase transition | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1902531 | regulation of intracellular signal transduction | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1902806 | regulation of cell cycle G1/S phase transition | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1902808 | positive regulation of cell cycle G1/S phase transition | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1903051 | negative regulation of proteolysis involved in protein catabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1903321 | negative regulation of protein modification by small protein conjugation or removal | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1904044 | response to aldosterone | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1904666 | regulation of ubiquitin protein ligase activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1904667 | negative regulation of ubiquitin protein ligase activity | IEP | Predict GO terms from Neighborhoods |
| CC | GO:1990904 | ribonucleoprotein complex | IEP | Predict GO terms from Neighborhoods |
| MF | GO:1990948 | ubiquitin ligase inhibitor activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:2000045 | regulation of G1/S transition of mitotic cell cycle | IEP | Predict GO terms from Neighborhoods |
| BP | GO:2000059 | negative regulation of ubiquitin-dependent protein catabolic process | IEP | Predict GO terms from Neighborhoods |
No InterPro domains available for this sequence
| No external refs found! |