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  5. SOLTUB.AGRIA.G00000038152

SOLTUB.AGRIA.G00000038152


Description : Transducin/WD40 repeat-like superfamily protein


Gene families : OG_02_0017256 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000038152
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_72


Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0003205 cardiac chamber development IEP Predict GO terms from Neighborhoods
BP GO:0003231 cardiac ventricle development IEP Predict GO terms from Neighborhoods
MF GO:0003712 transcription coregulator activity IEP Predict GO terms from Neighborhoods
MF GO:0003713 transcription coactivator activity IEP Predict GO terms from Neighborhoods
CC GO:0005694 chromosome IEP Predict GO terms from Neighborhoods
CC GO:0005840 ribosome IEP Predict GO terms from Neighborhoods
CC GO:0005854 nascent polypeptide-associated complex IEP Predict GO terms from Neighborhoods
BP GO:0006260 DNA replication IEP Predict GO terms from Neighborhoods
BP GO:0006261 DNA-templated DNA replication IEP Predict GO terms from Neighborhoods
BP GO:0006412 translation IEP Predict GO terms from Neighborhoods
BP GO:0006605 protein targeting IEP Predict GO terms from Neighborhoods
BP GO:0006612 protein targeting to membrane IEP Predict GO terms from Neighborhoods
BP GO:0006996 organelle organization IEP Predict GO terms from Neighborhoods
MF GO:0008134 transcription factor binding IEP Predict GO terms from Neighborhoods
BP GO:0008284 positive regulation of cell population proliferation IEP Predict GO terms from Neighborhoods
BP GO:0010656 negative regulation of muscle cell apoptotic process IEP Predict GO terms from Neighborhoods
BP GO:0010660 regulation of muscle cell apoptotic process IEP Predict GO terms from Neighborhoods
BP GO:0010662 regulation of striated muscle cell apoptotic process IEP Predict GO terms from Neighborhoods
BP GO:0010664 negative regulation of striated muscle cell apoptotic process IEP Predict GO terms from Neighborhoods
BP GO:0010830 regulation of myotube differentiation IEP Predict GO terms from Neighborhoods
BP GO:0010927 cellular component assembly involved in morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0014812 muscle cell migration IEP Predict GO terms from Neighborhoods
BP GO:0016477 cell migration IEP Predict GO terms from Neighborhoods
MF GO:0016779 nucleotidyltransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0017025 TBP-class protein binding IEP Predict GO terms from Neighborhoods
CC GO:0022626 cytosolic ribosome IEP Predict GO terms from Neighborhoods
BP GO:0030029 actin filament-based process IEP Predict GO terms from Neighborhoods
BP GO:0030036 actin cytoskeleton organization IEP Predict GO terms from Neighborhoods
BP GO:0030097 hemopoiesis IEP Predict GO terms from Neighborhoods
BP GO:0030239 myofibril assembly IEP Predict GO terms from Neighborhoods
BP GO:0031032 actomyosin structure organization IEP Predict GO terms from Neighborhoods
BP GO:0031099 regeneration IEP Predict GO terms from Neighborhoods
BP GO:0042060 wound healing IEP Predict GO terms from Neighborhoods
BP GO:0042246 tissue regeneration IEP Predict GO terms from Neighborhoods
BP GO:0043043 peptide biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0043066 negative regulation of apoptotic process IEP Predict GO terms from Neighborhoods
BP GO:0043069 negative regulation of programmed cell death IEP Predict GO terms from Neighborhoods
CC GO:0043228 non-membrane-bounded organelle IEP Predict GO terms from Neighborhoods
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Predict GO terms from Neighborhoods
BP GO:0043403 skeletal muscle tissue regeneration IEP Predict GO terms from Neighborhoods
BP GO:0044260 cellular macromolecule metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0045927 positive regulation of growth IEP Predict GO terms from Neighborhoods
BP GO:0048534 hematopoietic or lymphoid organ development IEP Predict GO terms from Neighborhoods
BP GO:0048631 regulation of skeletal muscle tissue growth IEP Predict GO terms from Neighborhoods
BP GO:0048633 positive regulation of skeletal muscle tissue growth IEP Predict GO terms from Neighborhoods
BP GO:0048639 positive regulation of developmental growth IEP Predict GO terms from Neighborhoods
BP GO:0048641 regulation of skeletal muscle tissue development IEP Predict GO terms from Neighborhoods
BP GO:0048643 positive regulation of skeletal muscle tissue development IEP Predict GO terms from Neighborhoods
BP GO:0048742 regulation of skeletal muscle fiber development IEP Predict GO terms from Neighborhoods
BP GO:0048870 cell motility IEP Predict GO terms from Neighborhoods
MF GO:0051082 unfolded protein binding IEP Predict GO terms from Neighborhoods
BP GO:0051147 regulation of muscle cell differentiation IEP Predict GO terms from Neighborhoods
BP GO:0051153 regulation of striated muscle cell differentiation IEP Predict GO terms from Neighborhoods
BP GO:0051276 chromosome organization IEP Predict GO terms from Neighborhoods
BP GO:0051451 myoblast migration IEP Predict GO terms from Neighborhoods
BP GO:0051668 localization within membrane IEP Predict GO terms from Neighborhoods
BP GO:0060216 definitive hemopoiesis IEP Predict GO terms from Neighborhoods
BP GO:0060284 regulation of cell development IEP Predict GO terms from Neighborhoods
BP GO:0061383 trabecula morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0061384 heart trabecula morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0070925 organelle assembly IEP Predict GO terms from Neighborhoods
BP GO:0072657 protein localization to membrane IEP Predict GO terms from Neighborhoods
BP GO:0090150 establishment of protein localization to membrane IEP Predict GO terms from Neighborhoods
BP GO:0097435 supramolecular fiber organization IEP Predict GO terms from Neighborhoods
MF GO:0140296 general transcription initiation factor binding IEP Predict GO terms from Neighborhoods
BP GO:0140694 non-membrane-bounded organelle assembly IEP Predict GO terms from Neighborhoods
BP GO:1901227 obsolete negative regulation of transcription from RNA polymerase II promoter involved in heart development IEP Predict GO terms from Neighborhoods
BP GO:1901228 obsolete positive regulation of transcription from RNA polymerase II promoter involved in heart development IEP Predict GO terms from Neighborhoods
BP GO:1901861 regulation of muscle tissue development IEP Predict GO terms from Neighborhoods
BP GO:1901863 positive regulation of muscle tissue development IEP Predict GO terms from Neighborhoods
BP GO:2000136 regulation of cell proliferation involved in heart morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:2000138 positive regulation of cell proliferation involved in heart morphogenesis IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR036322 WD40_repeat_dom_sf 88 459
No external refs found!