SOLTUB.AGRIA.G00000038298

Description : ABC transporter family protein

Gene families : OG_02_0017277 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000038298
Cluster	HCCA Clusters (HRR 50 & PCC 0.5): Cluster_5

Type	GO Term	Name	Evidence	Source
BP	GO:0003002	regionalization	None	Extended
BP	GO:0003008	system process	None	Extended
BP	GO:0003013	circulatory system process	None	Extended
BP	GO:0003018	vascular process in circulatory system	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005319	lipid transporter activity	None	Extended
MF	GO:0005342	organic acid transmembrane transporter activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IEA	AHRD
CC	GO:0005773	vacuole	IEA	AHRD
CC	GO:0005783	endoplasmic reticulum	IEA	AHRD
CC	GO:0005911	cell-cell junction	None	Extended
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0006629	lipid metabolic process	None	Extended
BP	GO:0006631	fatty acid metabolic process	None	Extended
BP	GO:0006690	icosanoid metabolic process	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006811	ion transport	None	Extended
BP	GO:0006820	anion transport	None	Extended
BP	GO:0006869	lipid transport	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006952	defense response	None	Extended
BP	GO:0006970	response to osmotic stress	None	Extended
BP	GO:0007389	pattern specification process	None	Extended
MF	GO:0008028	monocarboxylic acid transmembrane transporter activity	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008509	anion transmembrane transporter activity	None	Extended
MF	GO:0008514	organic anion transmembrane transporter activity	IEA	AHRD
BP	GO:0008610	lipid biosynthetic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009266	response to temperature stimulus	IEA	AHRD
CC	GO:0009506	plasmodesma	IEA	AHRD
CC	GO:0009507	chloroplast	IEA	AHRD
CC	GO:0009536	plastid	None	Extended
BP	GO:0009605	response to external stimulus	None	Extended
BP	GO:0009607	response to biotic stimulus	None	Extended
BP	GO:0009611	response to wounding	IEA	AHRD
BP	GO:0009615	response to virus	None	Extended
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009651	response to salt stress	IEA	AHRD
BP	GO:0009698	phenylpropanoid metabolic process	None	Extended
BP	GO:0009699	phenylpropanoid biosynthetic process	None	Extended
BP	GO:0009719	response to endogenous stimulus	None	Extended
BP	GO:0009725	response to hormone	None	Extended
BP	GO:0009737	response to abscisic acid	IEA	AHRD
CC	GO:0009897	external side of plasma membrane	IEA	AHRD
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010025	wax biosynthetic process	IEA	AHRD
BP	GO:0010033	response to organic substance	None	Extended
BP	GO:0010035	response to inorganic substance	IEA	AHRD
BP	GO:0010051	xylem and phloem pattern formation	None	Extended
BP	GO:0010166	wax metabolic process	None	Extended
BP	GO:0010222	stem vascular tissue pattern formation	IEA	AHRD
BP	GO:0010232	vascular transport	None	Extended
BP	GO:0010243	response to organonitrogen compound	IEA	AHRD
BP	GO:0010345	suberin biosynthetic process	IEA	AHRD
BP	GO:0010588	cotyledon vascular tissue pattern formation	IEA	AHRD
BP	GO:0010597	green leaf volatile biosynthetic process	IEA	AHRD
BP	GO:0014070	response to organic cyclic compound	None	Extended
MF	GO:0015075	ion transmembrane transporter activity	None	Extended
MF	GO:0015245	fatty acid transmembrane transporter activity	IEA	AHRD
MF	GO:0015399	primary active transmembrane transporter activity	None	Extended
MF	GO:0015562	efflux transmembrane transporter activity	IEA	AHRD
BP	GO:0015711	organic anion transport	None	Extended
BP	GO:0015718	monocarboxylic acid transport	IEA	AHRD
BP	GO:0015849	organic acid transport	None	Extended
BP	GO:0015908	fatty acid transport	IEA	AHRD
CC	GO:0016020	membrane	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
CC	GO:0016324	apical plasma membrane	IEA	AHRD
BP	GO:0019372	lipoxygenase pathway	None	Extended
BP	GO:0019438	aromatic compound biosynthetic process	None	Extended
BP	GO:0019748	secondary metabolic process	None	Extended
BP	GO:0019752	carboxylic acid metabolic process	None	Extended
BP	GO:0022414	reproductive process	None	Extended
BP	GO:0022607	cellular component assembly	IEA	AHRD
MF	GO:0022804	active transmembrane transporter activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
CC	GO:0030054	cell junction	None	Extended
CC	GO:0031090	organelle membrane	IEA	AHRD
CC	GO:0031967	organelle envelope	IEA	AHRD
CC	GO:0031974	membrane-enclosed lumen	None	Extended
CC	GO:0031975	envelope	None	Extended
BP	GO:0032501	multicellular organismal process	None	Extended
BP	GO:0032502	developmental process	None	Extended
BP	GO:0032787	monocarboxylic acid metabolic process	None	Extended
BP	GO:0032870	cellular response to hormone stimulus	IEA	AHRD
BP	GO:0033993	response to lipid	None	Extended
BP	GO:0042221	response to chemical	None	Extended
BP	GO:0042335	cuticle development	IEA	AHRD
MF	GO:0042626	ATPase-coupled transmembrane transporter activity	None	Extended
MF	GO:0042802	identical protein binding	None	Extended
MF	GO:0042803	protein homodimerization activity	IEA	AHRD
MF	GO:0042887	amide transmembrane transporter activity	IEA	AHRD
BP	GO:0042908	xenobiotic transport	IEA	AHRD
MF	GO:0042910	xenobiotic transmembrane transporter activity	IEA	AHRD
BP	GO:0043207	response to external biotic stimulus	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0043233	organelle lumen	None	Extended
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044255	cellular lipid metabolic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0044419	biological process involved in interspecies interaction between organisms	None	Extended
BP	GO:0044550	secondary metabolite biosynthetic process	None	Extended
BP	GO:0046942	carboxylic acid transport	None	Extended
MF	GO:0046943	carboxylic acid transmembrane transporter activity	None	Extended
MF	GO:0046983	protein dimerization activity	None	Extended
BP	GO:0048519	negative regulation of biological process	None	Extended
BP	GO:0048856	anatomical structure development	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051180	vitamin transport	IEA	AHRD
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051239	regulation of multicellular organismal process	None	Extended
BP	GO:0051241	negative regulation of multicellular organismal process	IEA	AHRD
BP	GO:0051607	defense response to virus	IEA	AHRD
BP	GO:0051707	response to other organism	None	Extended
BP	GO:0051716	cellular response to stimulus	None	Extended
BP	GO:0055085	transmembrane transport	None	Extended
BP	GO:0065007	biological regulation	None	Extended
CC	GO:0070013	intracellular organelle lumen	IEA	AHRD
CC	GO:0070161	anchoring junction	None	Extended
BP	GO:0070887	cellular response to chemical stimulus	None	Extended
BP	GO:0071310	cellular response to organic substance	None	Extended
BP	GO:0071396	cellular response to lipid	IEA	AHRD
BP	GO:0071407	cellular response to organic cyclic compound	IEA	AHRD
BP	GO:0071495	cellular response to endogenous stimulus	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0071705	nitrogen compound transport	IEA	AHRD
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
BP	GO:0080051	cutin transport	IEA	AHRD
BP	GO:0080167	response to karrikin	IEA	AHRD
BP	GO:0080172	petal epidermis patterning	IEA	AHRD
MF	GO:0090482	vitamin transmembrane transporter activity	IEA	AHRD
BP	GO:0097305	response to alcohol	None	Extended
BP	GO:0098542	defense response to other organism	None	Extended
CC	GO:0098552	side of membrane	None	Extended
CC	GO:0098590	plasma membrane region	None	Extended
BP	GO:0098754	detoxification	IEA	AHRD
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:0140115	export across plasma membrane	IEA	AHRD
BP	GO:0140352	export from cell	None	Extended
MF	GO:0140359	ABC-type transporter activity	IEA	AHRD
BP	GO:0140546	defense response to symbiont	None	Extended
MF	GO:0140657	ATP-dependent activity	None	Extended
BP	GO:0150104	transport across blood-brain barrier	IEA	AHRD
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901362	organic cyclic compound biosynthetic process	None	Extended
BP	GO:1901568	fatty acid derivative metabolic process	None	Extended
BP	GO:1901570	fatty acid derivative biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
BP	GO:1901698	response to nitrogen compound	None	Extended
BP	GO:1901700	response to oxygen-containing compound	None	Extended
BP	GO:1901701	cellular response to oxygen-containing compound	IEA	AHRD

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Type	GO Term	Name	Evidence	Source
BP	GO:0000038	very long-chain fatty acid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0001101	response to acid chemical	IEP	Predict GO terms from Neighborhoods
BP	GO:0001525	angiogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0001933	negative regulation of protein phosphorylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0002791	regulation of peptide secretion	IEP	Predict GO terms from Neighborhoods
BP	GO:0002793	positive regulation of peptide secretion	IEP	Predict GO terms from Neighborhoods
BP	GO:0003006	developmental process involved in reproduction	IEP	Predict GO terms from Neighborhoods
MF	GO:0004144	diacylglycerol O-acyltransferase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004312	fatty acid synthase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004467	long-chain fatty acid-CoA ligase activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0005794	Golgi apparatus	IEP	Predict GO terms from Neighborhoods
CC	GO:0005840	ribosome	IEP	Predict GO terms from Neighborhoods
BP	GO:0006633	fatty acid biosynthetic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0008374	O-acyltransferase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0009409	response to cold	IEP	Predict GO terms from Neighborhoods
BP	GO:0009414	response to water deprivation	IEP	Predict GO terms from Neighborhoods
BP	GO:0009415	response to water	IEP	Predict GO terms from Neighborhoods
BP	GO:0009635	response to herbicide	IEP	Predict GO terms from Neighborhoods
BP	GO:0009653	anatomical structure morphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0009826	unidimensional cell growth	IEP	Predict GO terms from Neighborhoods
MF	GO:0009922	fatty acid elongase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0010152	pollen maturation	IEP	Predict GO terms from Neighborhoods
BP	GO:0010584	pollen exine formation	IEP	Predict GO terms from Neighborhoods
BP	GO:0010632	regulation of epithelial cell migration	IEP	Predict GO terms from Neighborhoods
BP	GO:0010633	negative regulation of epithelial cell migration	IEP	Predict GO terms from Neighborhoods
BP	GO:0010906	regulation of glucose metabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0015645	fatty acid ligase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0016053	organic acid biosynthetic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0016405	CoA-ligase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0016411	acylglycerol O-acyltransferase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0016500	protein-hormone receptor activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0016620	oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor	IEP	Predict GO terms from Neighborhoods
MF	GO:0016740	transferase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0016746	acyltransferase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0016747	acyltransferase activity, transferring groups other than amino-acyl groups	IEP	Predict GO terms from Neighborhoods
MF	GO:0016874	ligase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0016877	ligase activity, forming carbon-sulfur bonds	IEP	Predict GO terms from Neighborhoods
MF	GO:0016878	acid-thiol ligase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0016903	oxidoreductase activity, acting on the aldehyde or oxo group of donors	IEP	Predict GO terms from Neighborhoods
BP	GO:0019221	cytokine-mediated signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0019395	fatty acid oxidation	IEP	Predict GO terms from Neighborhoods
CC	GO:0022626	cytosolic ribosome	IEP	Predict GO terms from Neighborhoods
BP	GO:0030258	lipid modification	IEP	Predict GO terms from Neighborhoods
BP	GO:0030336	negative regulation of cell migration	IEP	Predict GO terms from Neighborhoods
BP	GO:0030718	germ-line stem cell population maintenance	IEP	Predict GO terms from Neighborhoods
BP	GO:0032024	positive regulation of insulin secretion	IEP	Predict GO terms from Neighborhoods
BP	GO:0033211	adiponectin-activated signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0033500	carbohydrate homeostasis	IEP	Predict GO terms from Neighborhoods
BP	GO:0034440	lipid oxidation	IEP	Predict GO terms from Neighborhoods
BP	GO:0036099	female germ-line stem cell population maintenance	IEP	Predict GO terms from Neighborhoods
BP	GO:0040013	negative regulation of locomotion	IEP	Predict GO terms from Neighborhoods
BP	GO:0042326	negative regulation of phosphorylation	IEP	Predict GO terms from Neighborhoods
MF	GO:0042562	hormone binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0042593	glucose homeostasis	IEP	Predict GO terms from Neighborhoods
BP	GO:0042761	very long-chain fatty acid biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0044283	small molecule biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0045017	glycerolipid biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0046165	alcohol biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0046394	carboxylic acid biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0046425	regulation of receptor signaling pathway via JAK-STAT	IEP	Predict GO terms from Neighborhoods
BP	GO:0046426	negative regulation of receptor signaling pathway via JAK-STAT	IEP	Predict GO terms from Neighborhoods
BP	GO:0046486	glycerolipid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0046883	regulation of hormone secretion	IEP	Predict GO terms from Neighborhoods
BP	GO:0046887	positive regulation of hormone secretion	IEP	Predict GO terms from Neighborhoods
MF	GO:0047196	long-chain-alcohol O-fatty-acyltransferase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0048444	floral organ morphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0048446	petal morphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0048646	anatomical structure formation involved in morphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0048868	pollen tube development	IEP	Predict GO terms from Neighborhoods
MF	GO:0050062	long-chain-fatty-acyl-CoA reductase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0050708	regulation of protein secretion	IEP	Predict GO terms from Neighborhoods
BP	GO:0050714	positive regulation of protein secretion	IEP	Predict GO terms from Neighborhoods
BP	GO:0050796	regulation of insulin secretion	IEP	Predict GO terms from Neighborhoods
BP	GO:0051047	positive regulation of secretion	IEP	Predict GO terms from Neighborhoods
BP	GO:0051222	positive regulation of protein transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0055090	acylglycerol homeostasis	IEP	Predict GO terms from Neighborhoods
MF	GO:0055100	adiponectin binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0060055	angiogenesis involved in wound healing	IEP	Predict GO terms from Neighborhoods
BP	GO:0060560	developmental growth involved in morphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0061042	vascular wound healing	IEP	Predict GO terms from Neighborhoods
BP	GO:0070328	triglyceride homeostasis	IEP	Predict GO terms from Neighborhoods
BP	GO:0070417	cellular response to cold	IEP	Predict GO terms from Neighborhoods
BP	GO:0072330	monocarboxylic acid biosynthetic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0080019	fatty-acyl-CoA reductase (alcohol-forming) activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0090087	regulation of peptide transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0090276	regulation of peptide hormone secretion	IEP	Predict GO terms from Neighborhoods
BP	GO:0090277	positive regulation of peptide hormone secretion	IEP	Predict GO terms from Neighborhoods
BP	GO:0090697	post-embryonic plant organ morphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0090698	post-embryonic plant morphogenesis	IEP	Predict GO terms from Neighborhoods
MF	GO:0097003	adipokinetic hormone receptor activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0120161	regulation of cold-induced thermogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0120162	positive regulation of cold-induced thermogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:1901222	regulation of NIK/NF-kappaB signaling	IEP	Predict GO terms from Neighborhoods
BP	GO:1901223	negative regulation of NIK/NF-kappaB signaling	IEP	Predict GO terms from Neighborhoods
BP	GO:1903173	fatty alcohol metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1903175	fatty alcohol biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1903532	positive regulation of secretion by cell	IEP	Predict GO terms from Neighborhoods
BP	GO:1904892	regulation of receptor signaling pathway via STAT	IEP	Predict GO terms from Neighborhoods
BP	GO:1904893	negative regulation of receptor signaling pathway via STAT	IEP	Predict GO terms from Neighborhoods
BP	GO:1904951	positive regulation of establishment of protein localization	IEP	Predict GO terms from Neighborhoods
BP	GO:1905392	plant organ morphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:2000146	negative regulation of cell motility	IEP	Predict GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR013525	ABC_2_trans	328	494
IPR003439	ABC_transporter-like_ATP-bd	46	197
IPR027417	P-loop_NTPase	39	231

External Links

No external refs found!

SOLTUB.AGRIA.G00000038298

Expression Profile

Co-expression Networks

Functional Annotation