SOLTUB.AGRIA.G00000038387


Description : Actin


Gene families : OG_02_0000049 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000038387
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_47


Type GO Term Name Evidence Source
MF GO:0005200 structural constituent of cytoskeleton IEA AHRD
MF GO:0005515 protein binding IEA AHRD
MF GO:0005524 ATP binding IEA AHRD
CC GO:0005739 mitochondrion IEA AHRD
CC GO:0005829 cytosol IEA AHRD
CC GO:0005856 cytoskeleton IEA AHRD
CC GO:0005886 plasma membrane IEA AHRD
BP GO:0007010 cytoskeleton organization IEA AHRD
BP GO:0009416 response to light stimulus IEA AHRD
CC GO:0009506 plasmodesma IEA AHRD
CC GO:0009570 chloroplast stroma IEA AHRD
BP GO:0009611 response to wounding IEA AHRD
BP GO:0009733 response to auxin IEA AHRD
BP GO:0009845 seed germination IEA AHRD
CC GO:0009941 chloroplast envelope IEA AHRD
BP GO:0010053 root epidermal cell differentiation IEA AHRD
BP GO:0015031 protein transport IEA AHRD
BP GO:0048589 developmental growth IEA AHRD
BP GO:0051301 cell division IEA AHRD
Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP Predict GO terms from Neighborhoods
MF GO:0004351 glutamate decarboxylase activity IEP Predict GO terms from Neighborhoods
MF GO:0005384 manganese ion transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0005451 monovalent cation:proton antiporter activity IEP Predict GO terms from Neighborhoods
MF GO:0005516 calmodulin binding IEP Predict GO terms from Neighborhoods
CC GO:0005770 late endosome IEP Predict GO terms from Neighborhoods
BP GO:0006536 glutamate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006538 glutamate catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006826 iron ion transport IEP Predict GO terms from Neighborhoods
BP GO:0006828 manganese ion transport IEP Predict GO terms from Neighborhoods
BP GO:0006873 cellular ion homeostasis IEP Predict GO terms from Neighborhoods
BP GO:0006875 cellular metal ion homeostasis IEP Predict GO terms from Neighborhoods
BP GO:0006885 regulation of pH IEP Predict GO terms from Neighborhoods
BP GO:0009063 cellular amino acid catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009064 glutamine family amino acid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009065 glutamine family amino acid catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0010038 response to metal ion IEP Predict GO terms from Neighborhoods
BP GO:0010042 response to manganese ion IEP Predict GO terms from Neighborhoods
MF GO:0010486 manganese:proton antiporter activity IEP Predict GO terms from Neighborhoods
MF GO:0015078 proton transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0015297 antiporter activity IEP Predict GO terms from Neighborhoods
MF GO:0015298 solute:cation antiporter activity IEP Predict GO terms from Neighborhoods
MF GO:0015299 solute:proton antiporter activity IEP Predict GO terms from Neighborhoods
BP GO:0016054 organic acid catabolic process IEP Predict GO terms from Neighborhoods
MF GO:0016830 carbon-carbon lyase activity IEP Predict GO terms from Neighborhoods
MF GO:0016831 carboxy-lyase activity IEP Predict GO terms from Neighborhoods
BP GO:0019725 cellular homeostasis IEP Predict GO terms from Neighborhoods
MF GO:0019842 vitamin binding IEP Predict GO terms from Neighborhoods
BP GO:0030003 cellular cation homeostasis IEP Predict GO terms from Neighborhoods
BP GO:0030004 cellular monovalent inorganic cation homeostasis IEP Predict GO terms from Neighborhoods
BP GO:0030026 cellular manganese ion homeostasis IEP Predict GO terms from Neighborhoods
MF GO:0030170 pyridoxal phosphate binding IEP Predict GO terms from Neighborhoods
BP GO:0030641 regulation of cellular pH IEP Predict GO terms from Neighborhoods
BP GO:0031152 aggregation involved in sorocarp development IEP Predict GO terms from Neighborhoods
CC GO:0035618 root hair IEP Predict GO terms from Neighborhoods
BP GO:0042592 homeostatic process IEP Predict GO terms from Neighborhoods
BP GO:0043648 dicarboxylic acid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0043649 dicarboxylic acid catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0046395 carboxylic acid catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0046688 response to copper ion IEP Predict GO terms from Neighborhoods
MF GO:0046873 metal ion transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0046915 transition metal ion transmembrane transporter activity IEP Predict GO terms from Neighborhoods
BP GO:0046916 cellular transition metal ion homeostasis IEP Predict GO terms from Neighborhoods
BP GO:0048316 seed development IEP Predict GO terms from Neighborhoods
BP GO:0048878 chemical homeostasis IEP Predict GO terms from Neighborhoods
BP GO:0050801 ion homeostasis IEP Predict GO terms from Neighborhoods
MF GO:0051139 metal cation:proton antiporter activity IEP Predict GO terms from Neighborhoods
BP GO:0051235 maintenance of location IEP Predict GO terms from Neighborhoods
BP GO:0051238 sequestering of metal ion IEP Predict GO terms from Neighborhoods
BP GO:0051453 regulation of intracellular pH IEP Predict GO terms from Neighborhoods
BP GO:0051454 intracellular pH elevation IEP Predict GO terms from Neighborhoods
BP GO:0051651 maintenance of location in cell IEP Predict GO terms from Neighborhoods
BP GO:0051703 biological process involved in intraspecies interaction between organisms IEP Predict GO terms from Neighborhoods
BP GO:0055067 monovalent inorganic cation homeostasis IEP Predict GO terms from Neighborhoods
BP GO:0055071 manganese ion homeostasis IEP Predict GO terms from Neighborhoods
BP GO:0055076 transition metal ion homeostasis IEP Predict GO terms from Neighborhoods
BP GO:0055080 cation homeostasis IEP Predict GO terms from Neighborhoods
BP GO:0055082 cellular chemical homeostasis IEP Predict GO terms from Neighborhoods
MF GO:0070279 vitamin B6 binding IEP Predict GO terms from Neighborhoods
BP GO:0071421 manganese ion transmembrane transport IEP Predict GO terms from Neighborhoods
BP GO:0097577 sequestering of iron ion IEP Predict GO terms from Neighborhoods
BP GO:0098771 inorganic ion homeostasis IEP Predict GO terms from Neighborhoods
BP GO:0099120 socially cooperative development IEP Predict GO terms from Neighborhoods
MF GO:0140828 metal cation:monoatomic cation antiporter activity IEP Predict GO terms from Neighborhoods
BP GO:1901606 alpha-amino acid catabolic process IEP Predict GO terms from Neighborhoods
BP GO:2000022 regulation of jasmonic acid mediated signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:2000031 regulation of salicylic acid mediated signaling pathway IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR043129 ATPase_NBD 6 154
IPR004000 Actin 5 378
IPR043129 ATPase_NBD 148 378
No external refs found!