SOLTUB.AGRIA.G00000038446

Description : Cyclin-dependent kinases regulatory subunit

Gene families : OG_02_0001683 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000038446
Cluster	HCCA Clusters (HRR 50 & PCC 0.5): Cluster_126

Type	GO Term	Name	Evidence	Source
BP	GO:0000079	regulation of cyclin-dependent protein serine/threonine kinase activity	None	Extended
CC	GO:0000151	ubiquitin ligase complex	None	Extended
BP	GO:0000212	meiotic spindle organization	None	Extended
BP	GO:0000226	microtubule cytoskeleton organization	None	Extended
BP	GO:0000278	mitotic cell cycle	None	Extended
CC	GO:0000307	cyclin-dependent protein kinase holoenzyme complex	IEA	AHRD
BP	GO:0000902	cell morphogenesis	None	Extended
BP	GO:0001932	regulation of protein phosphorylation	None	Extended
BP	GO:0001934	positive regulation of protein phosphorylation	None	Extended
BP	GO:0002009	morphogenesis of an epithelium	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003682	chromatin binding	IEA	AHRD
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005654	nucleoplasm	IEA	AHRD
CC	GO:0005737	cytoplasm	IEA	AHRD
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006259	DNA metabolic process	None	Extended
BP	GO:0006260	DNA replication	None	Extended
BP	GO:0006261	DNA-templated DNA replication	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	None	Extended
BP	GO:0006357	regulation of transcription by RNA polymerase II	None	Extended
BP	GO:0006508	proteolysis	None	Extended
BP	GO:0006511	ubiquitin-dependent protein catabolic process	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0006996	organelle organization	None	Extended
BP	GO:0007010	cytoskeleton organization	None	Extended
BP	GO:0007017	microtubule-based process	None	Extended
BP	GO:0007049	cell cycle	None	Extended
BP	GO:0007051	spindle organization	None	Extended
BP	GO:0007056	spindle assembly involved in female meiosis	None	Extended
BP	GO:0007057	spindle assembly involved in female meiosis I	IEA	AHRD
BP	GO:0007346	regulation of mitotic cell cycle	None	Extended
BP	GO:0007488	histoblast morphogenesis	IEA	AHRD
BP	GO:0007560	imaginal disc morphogenesis	None	Extended
MF	GO:0008047	enzyme activator activity	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008283	cell population proliferation	IEA	AHRD
BP	GO:0009056	catabolic process	None	Extended
BP	GO:0009057	macromolecule catabolic process	None	Extended
BP	GO:0009653	anatomical structure morphogenesis	None	Extended
BP	GO:0009794	regulation of mitotic cell cycle, embryonic	IEA	AHRD
BP	GO:0009886	post-embryonic animal morphogenesis	None	Extended
BP	GO:0009887	animal organ morphogenesis	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0009891	positive regulation of biosynthetic process	None	Extended
BP	GO:0009893	positive regulation of metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010498	proteasomal protein catabolic process	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0010557	positive regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0010562	positive regulation of phosphorus metabolic process	None	Extended
BP	GO:0010604	positive regulation of macromolecule metabolic process	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
MF	GO:0016538	cyclin-dependent protein serine/threonine kinase regulator activity	None	Extended
CC	GO:0019005	SCF ubiquitin ligase complex	IEA	AHRD
MF	GO:0019207	kinase regulator activity	None	Extended
MF	GO:0019209	kinase activator activity	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019220	regulation of phosphate metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0019887	protein kinase regulator activity	None	Extended
MF	GO:0019899	enzyme binding	None	Extended
MF	GO:0019900	kinase binding	None	Extended
MF	GO:0019901	protein kinase binding	IEA	AHRD
BP	GO:0019941	modification-dependent protein catabolic process	None	Extended
BP	GO:0022402	cell cycle process	None	Extended
BP	GO:0022412	cellular process involved in reproduction in multicellular organism	None	Extended
BP	GO:0022414	reproductive process	None	Extended
BP	GO:0022607	cellular component assembly	None	Extended
BP	GO:0030163	protein catabolic process	None	Extended
MF	GO:0030234	enzyme regulator activity	None	Extended
MF	GO:0030295	protein kinase activator activity	None	Extended
BP	GO:0031145	anaphase-promoting complex-dependent catabolic process	IEA	AHRD
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031325	positive regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0031328	positive regulation of cellular biosynthetic process	None	Extended
BP	GO:0031399	regulation of protein modification process	None	Extended
BP	GO:0031401	positive regulation of protein modification process	None	Extended
CC	GO:0031461	cullin-RING ubiquitin ligase complex	None	Extended
MF	GO:0032182	ubiquitin-like protein binding	None	Extended
BP	GO:0032502	developmental process	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0033301	cell cycle comprising mitosis without cytokinesis	None	Extended
BP	GO:0033674	positive regulation of kinase activity	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0035186	syncytial blastoderm mitotic cell cycle	IEA	AHRD
BP	GO:0035239	tube morphogenesis	None	Extended
BP	GO:0042023	DNA endoreduplication	IEA	AHRD
BP	GO:0042325	regulation of phosphorylation	None	Extended
BP	GO:0042327	positive regulation of phosphorylation	None	Extended
MF	GO:0042393	histone binding	IEA	AHRD
BP	GO:0043085	positive regulation of catalytic activity	None	Extended
MF	GO:0043130	ubiquitin binding	IEA	AHRD
BP	GO:0043161	proteasome-mediated ubiquitin-dependent protein catabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
MF	GO:0043539	protein serine/threonine kinase activator activity	None	Extended
BP	GO:0043549	regulation of kinase activity	None	Extended
BP	GO:0043632	modification-dependent macromolecule catabolic process	None	Extended
BP	GO:0044093	positive regulation of molecular function	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044248	cellular catabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044265	cellular macromolecule catabolic process	None	Extended
BP	GO:0044770	cell cycle phase transition	None	Extended
BP	GO:0044772	mitotic cell cycle phase transition	IEA	AHRD
BP	GO:0044786	cell cycle DNA replication	None	Extended
BP	GO:0045448	mitotic cell cycle, embryonic	None	Extended
BP	GO:0045737	positive regulation of cyclin-dependent protein serine/threonine kinase activity	IEA	AHRD
BP	GO:0045787	positive regulation of cell cycle	None	Extended
BP	GO:0045859	regulation of protein kinase activity	None	Extended
BP	GO:0045860	positive regulation of protein kinase activity	None	Extended
BP	GO:0045893	positive regulation of DNA-templated transcription	None	Extended
BP	GO:0045935	positive regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0045937	positive regulation of phosphate metabolic process	None	Extended
BP	GO:0045944	positive regulation of transcription by RNA polymerase II	IEA	AHRD
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0048518	positive regulation of biological process	None	Extended
BP	GO:0048522	positive regulation of cellular process	None	Extended
BP	GO:0048563	post-embryonic animal organ morphogenesis	None	Extended
BP	GO:0048729	tissue morphogenesis	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050790	regulation of catalytic activity	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051173	positive regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051174	regulation of phosphorus metabolic process	None	Extended
BP	GO:0051225	spindle assembly	None	Extended
BP	GO:0051246	regulation of protein metabolic process	None	Extended
BP	GO:0051247	positive regulation of protein metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0051254	positive regulation of RNA metabolic process	None	Extended
BP	GO:0051301	cell division	IEA	AHRD
BP	GO:0051338	regulation of transferase activity	None	Extended
BP	GO:0051347	positive regulation of transferase activity	None	Extended
BP	GO:0051603	proteolysis involved in protein catabolic process	None	Extended
BP	GO:0051726	regulation of cell cycle	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0060562	epithelial tube morphogenesis	None	Extended
MF	GO:0061575	cyclin-dependent protein serine/threonine kinase activator activity	IEA	AHRD
CC	GO:0061695	transferase complex, transferring phosphorus-containing groups	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0065009	regulation of molecular function	None	Extended
BP	GO:0070925	organelle assembly	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
BP	GO:0071900	regulation of protein serine/threonine kinase activity	None	Extended
BP	GO:0071902	positive regulation of protein serine/threonine kinase activity	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
BP	GO:0090306	meiotic spindle assembly	None	Extended
MF	GO:0098772	molecular function regulator activity	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
CC	GO:0140535	intracellular protein-containing complex	None	Extended
BP	GO:0140694	non-membrane-bounded organelle assembly	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901565	organonitrogen compound catabolic process	None	Extended
BP	GO:1901575	organic substance catabolic process	None	Extended
CC	GO:1902494	catalytic complex	None	Extended
CC	GO:1902554	serine/threonine protein kinase complex	None	Extended
BP	GO:1902680	positive regulation of RNA biosynthetic process	None	Extended
CC	GO:1902911	protein kinase complex	None	Extended
BP	GO:1903046	meiotic cell cycle process	None	Extended
BP	GO:1903047	mitotic cell cycle process	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:1903508	positive regulation of nucleic acid-templated transcription	None	Extended
BP	GO:1904029	regulation of cyclin-dependent protein kinase activity	None	Extended
BP	GO:1904031	positive regulation of cyclin-dependent protein kinase activity	None	Extended
CC	GO:1990234	transferase complex	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000281	mitotic cytokinesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0000904	cell morphogenesis involved in differentiation	IEP	Predict GO terms from Neighborhoods
BP	GO:0000910	cytokinesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0001701	in utero embryonic development	IEP	Predict GO terms from Neighborhoods
CC	GO:0005856	cytoskeleton	IEP	Predict GO terms from Neighborhoods
BP	GO:0007264	small GTPase mediated signal transduction	IEP	Predict GO terms from Neighborhoods
BP	GO:0007265	Ras protein signal transduction	IEP	Predict GO terms from Neighborhoods
BP	GO:0008284	positive regulation of cell population proliferation	IEP	Predict GO terms from Neighborhoods
BP	GO:0009790	embryo development	IEP	Predict GO terms from Neighborhoods
BP	GO:0009792	embryo development ending in birth or egg hatching	IEP	Predict GO terms from Neighborhoods
BP	GO:0010090	trichome morphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0010591	regulation of lamellipodium assembly	IEP	Predict GO terms from Neighborhoods
BP	GO:0010592	positive regulation of lamellipodium assembly	IEP	Predict GO terms from Neighborhoods
BP	GO:0010638	positive regulation of organelle organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0016601	Rac protein signal transduction	IEP	Predict GO terms from Neighborhoods
CC	GO:0030027	lamellipodium	IEP	Predict GO terms from Neighborhoods
BP	GO:0030030	cell projection organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0030031	cell projection assembly	IEP	Predict GO terms from Neighborhoods
CC	GO:0031143	pseudopodium	IEP	Predict GO terms from Neighborhoods
CC	GO:0031209	SCAR complex	IEP	Predict GO terms from Neighborhoods
MF	GO:0031267	small GTPase binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0031268	pseudopodium organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0031269	pseudopodium assembly	IEP	Predict GO terms from Neighborhoods
BP	GO:0031344	regulation of cell projection organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0031346	positive regulation of cell projection organization	IEP	Predict GO terms from Neighborhoods
CC	GO:0032433	filopodium tip	IEP	Predict GO terms from Neighborhoods
BP	GO:0032956	regulation of actin cytoskeleton organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0032970	regulation of actin filament-based process	IEP	Predict GO terms from Neighborhoods
BP	GO:0033043	regulation of organelle organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0034315	regulation of Arp2/3 complex-mediated actin nucleation	IEP	Predict GO terms from Neighborhoods
BP	GO:0035556	intracellular signal transduction	IEP	Predict GO terms from Neighborhoods
BP	GO:0042127	regulation of cell population proliferation	IEP	Predict GO terms from Neighborhoods
CC	GO:0042995	cell projection	IEP	Predict GO terms from Neighborhoods
BP	GO:0043009	chordate embryonic development	IEP	Predict GO terms from Neighborhoods
BP	GO:0044087	regulation of cellular component biogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0044089	positive regulation of cellular component biogenesis	IEP	Predict GO terms from Neighborhoods
MF	GO:0044877	protein-containing complex binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0046847	filopodium assembly	IEP	Predict GO terms from Neighborhoods
BP	GO:0048870	cell motility	IEP	Predict GO terms from Neighborhoods
MF	GO:0051020	GTPase binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0051125	regulation of actin nucleation	IEP	Predict GO terms from Neighborhoods
BP	GO:0051127	positive regulation of actin nucleation	IEP	Predict GO terms from Neighborhoods
BP	GO:0051130	positive regulation of cellular component organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0051493	regulation of cytoskeleton organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0051495	positive regulation of cytoskeleton organization	IEP	Predict GO terms from Neighborhoods
CC	GO:0060187	cell pole	IEP	Predict GO terms from Neighborhoods
BP	GO:0060491	regulation of cell projection assembly	IEP	Predict GO terms from Neighborhoods
BP	GO:0061640	cytoskeleton-dependent cytokinesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0110053	regulation of actin filament organization	IEP	Predict GO terms from Neighborhoods
CC	GO:0120025	plasma membrane bounded cell projection	IEP	Predict GO terms from Neighborhoods
BP	GO:0120031	plasma membrane bounded cell projection assembly	IEP	Predict GO terms from Neighborhoods
BP	GO:0120032	regulation of plasma membrane bounded cell projection assembly	IEP	Predict GO terms from Neighborhoods
BP	GO:0120034	positive regulation of plasma membrane bounded cell projection assembly	IEP	Predict GO terms from Neighborhoods
BP	GO:0120035	regulation of plasma membrane bounded cell projection organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0120036	plasma membrane bounded cell projection organization	IEP	Predict GO terms from Neighborhoods
BP	GO:1902743	regulation of lamellipodium organization	IEP	Predict GO terms from Neighborhoods
BP	GO:1902745	positive regulation of lamellipodium organization	IEP	Predict GO terms from Neighborhoods
BP	GO:1902903	regulation of supramolecular fiber organization	IEP	Predict GO terms from Neighborhoods
BP	GO:1902905	positive regulation of supramolecular fiber organization	IEP	Predict GO terms from Neighborhoods
BP	GO:2000601	positive regulation of Arp2/3 complex-mediated actin nucleation	IEP	Predict GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR000789	Cyclin-dep_kinase_reg-sub	4	70
IPR036858	Cyclin-dep_kinase_reg-sub_sf	1	82

External Links

No external refs found!

SOLTUB.AGRIA.G00000038446

Expression Profile

Co-expression Networks

Functional Annotation