SOLTUB.AGRIA.G00000003847

Description : F-box protein

Gene families : OG_02_0012314 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000003847
Cluster	HCCA Clusters (HRR 50 & PCC 0.5): Cluster_260

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004842	ubiquitin-protein transferase activity	IEA	AHRD
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	AHRD
BP	GO:0006508	proteolysis	None	Extended
BP	GO:0006511	ubiquitin-dependent protein catabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009056	catabolic process	None	Extended
BP	GO:0009057	macromolecule catabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010498	proteasomal protein catabolic process	None	Extended
BP	GO:0016567	protein ubiquitination	IEA	AHRD
MF	GO:0016740	transferase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0019787	ubiquitin-like protein transferase activity	None	Extended
BP	GO:0019941	modification-dependent protein catabolic process	None	Extended
BP	GO:0030163	protein catabolic process	None	Extended
BP	GO:0031146	SCF-dependent proteasomal ubiquitin-dependent protein catabolic process	IEA	AHRD
BP	GO:0032446	protein modification by small protein conjugation	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0043161	proteasome-mediated ubiquitin-dependent protein catabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0043632	modification-dependent macromolecule catabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044248	cellular catabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044265	cellular macromolecule catabolic process	None	Extended
BP	GO:0051603	proteolysis involved in protein catabolic process	None	Extended
BP	GO:0070647	protein modification by small protein conjugation or removal	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901565	organonitrogen compound catabolic process	None	Extended
BP	GO:1901575	organic substance catabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000003	reproduction	IEP	Predict GO terms from Neighborhoods
BP	GO:0000045	autophagosome assembly	IEP	Predict GO terms from Neighborhoods
CC	GO:0000164	protein phosphatase type 1 complex	IEP	Predict GO terms from Neighborhoods
BP	GO:0000165	MAPK cascade	IEP	Predict GO terms from Neighborhoods
MF	GO:0000210	NAD+ diphosphatase activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0000329	fungal-type vacuole membrane	IEP	Predict GO terms from Neighborhoods
CC	GO:0000421	autophagosome membrane	IEP	Predict GO terms from Neighborhoods
CC	GO:0000781	chromosome, telomeric region	IEP	Predict GO terms from Neighborhoods
BP	GO:0001889	liver development	IEP	Predict GO terms from Neighborhoods
BP	GO:0002009	morphogenesis of an epithelium	IEP	Predict GO terms from Neighborhoods
MF	GO:0003986	acetyl-CoA hydrolase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004551	dinucleotide phosphatase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004722	protein serine/threonine phosphatase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0005496	steroid binding	IEP	Predict GO terms from Neighborhoods
CC	GO:0005765	lysosomal membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0005979	regulation of glycogen biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0005981	regulation of glycogen catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006104	succinyl-CoA metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006164	purine nucleotide biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006195	purine nucleotide catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006995	cellular response to nitrogen starvation	IEP	Predict GO terms from Neighborhoods
BP	GO:0007399	nervous system development	IEP	Predict GO terms from Neighborhoods
CC	GO:0008287	protein serine/threonine phosphatase complex	IEP	Predict GO terms from Neighborhoods
MF	GO:0008289	lipid binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0008429	phosphatidylethanolamine binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0008893	guanosine-3',5'-bis(diphosphate) 3'-diphosphatase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0009152	purine ribonucleotide biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009154	purine ribonucleotide catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009166	nucleotide catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009261	ribonucleotide catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009649	entrainment of circadian clock	IEP	Predict GO terms from Neighborhoods
BP	GO:0009740	gibberellic acid mediated signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0009894	regulation of catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0010017	red or far-red light signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0010161	red light signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0010508	positive regulation of autophagy	IEP	Predict GO terms from Neighborhoods
MF	GO:0010945	CoA pyrophosphatase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0010962	regulation of glucan biosynthetic process	IEP	Predict GO terms from Neighborhoods
CC	GO:0012506	vesicle membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0015936	coenzyme A metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0015937	coenzyme A biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0015938	coenzyme A catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0016239	positive regulation of macroautophagy	IEP	Predict GO terms from Neighborhoods
BP	GO:0016241	regulation of macroautophagy	IEP	Predict GO terms from Neighborhoods
MF	GO:0016289	CoA hydrolase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0016790	thiolester hydrolase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0016794	diphosphoric monoester hydrolase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0017018	myosin phosphatase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0019953	sexual reproduction	IEP	Predict GO terms from Neighborhoods
CC	GO:0030016	myofibril	IEP	Predict GO terms from Neighborhoods
MF	GO:0030145	manganese ion binding	IEP	Predict GO terms from Neighborhoods
CC	GO:0030659	cytoplasmic vesicle membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0031329	regulation of cellular catabolic process	IEP	Predict GO terms from Neighborhoods
CC	GO:0031902	late endosome membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0032885	regulation of polysaccharide biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0032922	circadian regulation of gene expression	IEP	Predict GO terms from Neighborhoods
CC	GO:0033110	Cvt vesicle membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0033866	nucleoside bisphosphate biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0033869	nucleoside bisphosphate catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0034030	ribonucleoside bisphosphate biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0034031	ribonucleoside bisphosphate catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0034033	purine nucleoside bisphosphate biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0034034	purine nucleoside bisphosphate catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0035337	fatty-acyl-CoA metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0036115	fatty-acyl-CoA catabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0042578	phosphoric ester hydrolase activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0042587	glycogen granule	IEP	Predict GO terms from Neighborhoods
BP	GO:0043153	entrainment of circadian clock by photoperiod	IEP	Predict GO terms from Neighborhoods
CC	GO:0043292	contractile fiber	IEP	Predict GO terms from Neighborhoods
BP	GO:0043470	regulation of carbohydrate catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0043471	regulation of cellular carbohydrate catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0043562	cellular response to nitrogen levels	IEP	Predict GO terms from Neighborhoods
BP	GO:0044273	sulfur compound catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0048102	autophagic cell death	IEP	Predict GO terms from Neighborhoods
MF	GO:0050115	myosin-light-chain-phosphatase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0050789	regulation of biological process	IEP	Predict GO terms from Neighborhoods
BP	GO:0060026	convergent extension	IEP	Predict GO terms from Neighborhoods
BP	GO:0060028	convergent extension involved in axis elongation	IEP	Predict GO terms from Neighborhoods
BP	GO:0070873	regulation of glycogen metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0071489	cellular response to red or far red light	IEP	Predict GO terms from Neighborhoods
BP	GO:0071491	cellular response to red light	IEP	Predict GO terms from Neighborhoods
CC	GO:0072357	PTW/PP1 phosphatase complex	IEP	Predict GO terms from Neighborhoods
BP	GO:0072523	purine-containing compound catabolic process	IEP	Predict GO terms from Neighborhoods
CC	GO:0098723	skeletal muscle myofibril	IEP	Predict GO terms from Neighborhoods
CC	GO:0098852	lytic vacuole membrane	IEP	Predict GO terms from Neighborhoods
CC	GO:0099080	supramolecular complex	IEP	Predict GO terms from Neighborhoods
CC	GO:0099081	supramolecular polymer	IEP	Predict GO terms from Neighborhoods
CC	GO:0099512	supramolecular fiber	IEP	Predict GO terms from Neighborhoods
BP	GO:1901292	nucleoside phosphate catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1901569	fatty acid derivative catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1902858	propionyl-CoA metabolic process	IEP	Predict GO terms from Neighborhoods
CC	GO:1903293	phosphatase complex	IEP	Predict GO terms from Neighborhoods
BP	GO:1905037	autophagosome organization	IEP	Predict GO terms from Neighborhoods
BP	GO:2001293	malonyl-CoA metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:2001294	malonyl-CoA catabolic process	IEP	Predict GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR036047	F-box-like_dom_sf	26	66
IPR017451	F-box-assoc_interact_dom	112	335

External Links

No external refs found!

SOLTUB.AGRIA.G00000003847

Expression Profile

Co-expression Networks

Functional Annotation