SOLTUB.AGRIA.G00000038567


Description : Calcium-binding EF-hand


Gene families : OG_02_0017313 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000038567
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_252


Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEA AHRD
CC GO:0000785 chromatin IEA AHRD
BP GO:0001824 blastocyst development IEA AHRD
MF GO:0004198 calcium-dependent cysteine-type endopeptidase activity IEA AHRD
MF GO:0005509 calcium ion binding IEA AHRD
CC GO:0005634 nucleus IEA AHRD
CC GO:0005764 lysosome IEA AHRD
CC GO:0005829 cytosol IEA AHRD
CC GO:0005886 plasma membrane IEA AHRD
BP GO:0006915 apoptotic process IEA AHRD
BP GO:0006919 activation of cysteine-type endopeptidase activity involved in apoptotic process IEA AHRD
BP GO:0006950 response to stress IEA AHRD
BP GO:0007520 myoblast fusion IEA AHRD
BP GO:0009610 response to symbiotic fungus IEA AHRD
BP GO:0009968 negative regulation of signal transduction IEA AHRD
BP GO:0014029 neural crest formation IEA AHRD
BP GO:0014032 neural crest cell development IEA AHRD
CC GO:0030127 COPII vesicle coat IEA AHRD
CC GO:0031463 Cul3-RING ubiquitin ligase complex IEA AHRD
MF GO:0042803 protein homodimerization activity IEA AHRD
CC GO:0042995 cell projection IEA AHRD
MF GO:0043495 protein-membrane adaptor activity IEA AHRD
MF GO:0046982 protein heterodimerization activity IEA AHRD
BP GO:0048208 COPII vesicle coating IEA AHRD
MF GO:0048306 calcium-dependent protein binding IEA AHRD
BP GO:0051128 regulation of cellular component organization IEA AHRD
BP GO:0051239 regulation of multicellular organismal process IEA AHRD
BP GO:0051592 response to calcium ion IEA AHRD
BP GO:0071230 cellular response to amino acid stimulus IEA AHRD
CC GO:0097038 perinuclear endoplasmic reticulum IEA AHRD
BP GO:1902527 positive regulation of protein monoubiquitination IEA AHRD
MF GO:1990756 ubiquitin ligase-substrate adaptor activity IEA AHRD
Type GO Term Name Evidence Source
BP GO:0000209 protein polyubiquitination IEP Predict GO terms from Neighborhoods
CC GO:0000325 plant-type vacuole IEP Predict GO terms from Neighborhoods
CC GO:0000407 phagophore assembly site IEP Predict GO terms from Neighborhoods
BP GO:0000422 autophagy of mitochondrion IEP Predict GO terms from Neighborhoods
BP GO:0002240 response to molecule of oomycetes origin IEP Predict GO terms from Neighborhoods
BP GO:0003032 detection of oxygen IEP Predict GO terms from Neighborhoods
MF GO:0003867 4-aminobutyrate transaminase activity IEP Predict GO terms from Neighborhoods
MF GO:0004015 adenosylmethionine-8-amino-7-oxononanoate transaminase activity IEP Predict GO terms from Neighborhoods
MF GO:0004352 glutamate dehydrogenase (NAD+) activity IEP Predict GO terms from Neighborhoods
MF GO:0004353 glutamate dehydrogenase [NAD(P)+] activity IEP Predict GO terms from Neighborhoods
MF GO:0004354 glutamate dehydrogenase (NADP+) activity IEP Predict GO terms from Neighborhoods
MF GO:0004611 phosphoenolpyruvate carboxykinase activity IEP Predict GO terms from Neighborhoods
MF GO:0004612 phosphoenolpyruvate carboxykinase (ATP) activity IEP Predict GO terms from Neighborhoods
MF GO:0004613 phosphoenolpyruvate carboxykinase (GTP) activity IEP Predict GO terms from Neighborhoods
MF GO:0004842 ubiquitin-protein transferase activity IEP Predict GO terms from Neighborhoods
MF GO:0005545 1-phosphatidylinositol binding IEP Predict GO terms from Neighborhoods
CC GO:0005576 extracellular region IEP Predict GO terms from Neighborhoods
CC GO:0005618 cell wall IEP Predict GO terms from Neighborhoods
CC GO:0005774 vacuolar membrane IEP Predict GO terms from Neighborhoods
CC GO:0005905 clathrin-coated pit IEP Predict GO terms from Neighborhoods
BP GO:0006083 acetate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006094 gluconeogenesis IEP Predict GO terms from Neighborhoods
BP GO:0006487 protein N-linked glycosylation IEP Predict GO terms from Neighborhoods
BP GO:0006536 glutamate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006538 glutamate catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006598 polyamine catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006768 biotin metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006952 defense response IEP Predict GO terms from Neighborhoods
BP GO:0006970 response to osmotic stress IEP Predict GO terms from Neighborhoods
BP GO:0007265 Ras protein signal transduction IEP Predict GO terms from Neighborhoods
BP GO:0007281 germ cell development IEP Predict GO terms from Neighborhoods
BP GO:0007286 spermatid development IEP Predict GO terms from Neighborhoods
MF GO:0008327 methyl-CpG binding IEP Predict GO terms from Neighborhoods
MF GO:0008395 steroid hydroxylase activity IEP Predict GO terms from Neighborhoods
BP GO:0009064 glutamine family amino acid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009065 glutamine family amino acid catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009102 biotin biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009310 amine catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009445 putrescine metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009447 putrescine catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009448 gamma-aminobutyric acid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009611 response to wounding IEP Predict GO terms from Neighborhoods
BP GO:0009646 response to absence of light IEP Predict GO terms from Neighborhoods
BP GO:0009647 skotomorphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0009651 response to salt stress IEP Predict GO terms from Neighborhoods
BP GO:0009743 response to carbohydrate IEP Predict GO terms from Neighborhoods
BP GO:0009746 response to hexose IEP Predict GO terms from Neighborhoods
BP GO:0009749 response to glucose IEP Predict GO terms from Neighborhoods
BP GO:0009867 jasmonic acid mediated signaling pathway IEP Predict GO terms from Neighborhoods
CC GO:0009898 cytoplasmic side of plasma membrane IEP Predict GO terms from Neighborhoods
MF GO:0010012 steroid 22-alpha hydroxylase activity IEP Predict GO terms from Neighborhoods
BP GO:0010072 primary shoot apical meristem specification IEP Predict GO terms from Neighborhoods
BP GO:0010271 regulation of chlorophyll catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0010446 response to alkaline pH IEP Predict GO terms from Neighborhoods
BP GO:0010581 regulation of starch biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0010726 positive regulation of hydrogen peroxide metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0010728 regulation of hydrogen peroxide biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0010729 positive regulation of hydrogen peroxide biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0015976 carbon utilization IEP Predict GO terms from Neighborhoods
BP GO:0016129 phytosteroid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0016132 brassinosteroid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0016192 vesicle-mediated transport IEP Predict GO terms from Neighborhoods
BP GO:0016567 protein ubiquitination IEP Predict GO terms from Neighborhoods
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP Predict GO terms from Neighborhoods
MF GO:0016639 oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor IEP Predict GO terms from Neighborhoods
MF GO:0016899 oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor IEP Predict GO terms from Neighborhoods
BP GO:0018196 peptidyl-asparagine modification IEP Predict GO terms from Neighborhoods
BP GO:0018279 protein N-linked glycosylation via asparagine IEP Predict GO terms from Neighborhoods
BP GO:0019319 hexose biosynthetic process IEP Predict GO terms from Neighborhoods
MF GO:0019787 ubiquitin-like protein transferase activity IEP Predict GO terms from Neighborhoods
BP GO:0030100 regulation of endocytosis IEP Predict GO terms from Neighborhoods
MF GO:0030145 manganese ion binding IEP Predict GO terms from Neighborhoods
CC GO:0030312 external encapsulating structure IEP Predict GO terms from Neighborhoods
BP GO:0030587 sorocarp development IEP Predict GO terms from Neighborhoods
CC GO:0031012 extracellular matrix IEP Predict GO terms from Neighborhoods
CC GO:0031164 contractile vacuolar membrane IEP Predict GO terms from Neighborhoods
CC GO:0031225 anchored component of membrane IEP Predict GO terms from Neighborhoods
CC GO:0031430 M band IEP Predict GO terms from Neighborhoods
MF GO:0032050 clathrin heavy chain binding IEP Predict GO terms from Neighborhoods
BP GO:0032328 alanine transport IEP Predict GO terms from Neighborhoods
BP GO:0032387 negative regulation of intracellular transport IEP Predict GO terms from Neighborhoods
BP GO:0032446 protein modification by small protein conjugation IEP Predict GO terms from Neighborhoods
BP GO:0032482 Rab protein signal transduction IEP Predict GO terms from Neighborhoods
BP GO:0032680 regulation of tumor necrosis factor production IEP Predict GO terms from Neighborhoods
CC GO:0033116 endoplasmic reticulum-Golgi intermediate compartment membrane IEP Predict GO terms from Neighborhoods
BP GO:0033554 cellular response to stress IEP Predict GO terms from Neighborhoods
BP GO:0034284 response to monosaccharide IEP Predict GO terms from Neighborhoods
MF GO:0034387 4-aminobutyrate:pyruvate transaminase activity IEP Predict GO terms from Neighborhoods
BP GO:0034497 protein localization to phagophore assembly site IEP Predict GO terms from Neighborhoods
MF GO:0036094 small molecule binding IEP Predict GO terms from Neighborhoods
BP GO:0036294 cellular response to decreased oxygen levels IEP Predict GO terms from Neighborhoods
BP GO:0040034 regulation of development, heterochronic IEP Predict GO terms from Neighborhoods
BP GO:0042399 ectoine metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0042400 ectoine catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0042402 cellular biogenic amine catabolic process IEP Predict GO terms from Neighborhoods
CC GO:0042734 presynaptic membrane IEP Predict GO terms from Neighborhoods
MF GO:0043168 anion binding IEP Predict GO terms from Neighborhoods
BP GO:0043648 dicarboxylic acid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0043649 dicarboxylic acid catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0044804 autophagy of nucleus IEP Predict GO terms from Neighborhoods
BP GO:0044805 late nucleophagy IEP Predict GO terms from Neighborhoods
MF GO:0045303 diaminobutyrate-2-oxoglutarate transaminase activity IEP Predict GO terms from Neighborhoods
CC GO:0045334 clathrin-coated endocytic vesicle IEP Predict GO terms from Neighborhoods
MF GO:0045551 cinnamyl-alcohol dehydrogenase activity IEP Predict GO terms from Neighborhoods
MF GO:0045735 nutrient reservoir activity IEP Predict GO terms from Neighborhoods
BP GO:0045921 positive regulation of exocytosis IEP Predict GO terms from Neighborhoods
BP GO:0046395 carboxylic acid catabolic process IEP Predict GO terms from Neighborhoods
CC GO:0046658 anchored component of plasma membrane IEP Predict GO terms from Neighborhoods
MF GO:0046914 transition metal ion binding IEP Predict GO terms from Neighborhoods
CC GO:0048046 apoplast IEP Predict GO terms from Neighborhoods
BP GO:0048759 xylem vessel member cell differentiation IEP Predict GO terms from Neighborhoods
MF GO:0050268 coniferyl-alcohol dehydrogenase activity IEP Predict GO terms from Neighborhoods
BP GO:0050832 defense response to fungus IEP Predict GO terms from Neighborhoods
BP GO:0051149 positive regulation of muscle cell differentiation IEP Predict GO terms from Neighborhoods
BP GO:0051153 regulation of striated muscle cell differentiation IEP Predict GO terms from Neighborhoods
BP GO:0051155 positive regulation of striated muscle cell differentiation IEP Predict GO terms from Neighborhoods
BP GO:0051703 biological process involved in intraspecies interaction between organisms IEP Predict GO terms from Neighborhoods
CC GO:0055120 striated muscle dense body IEP Predict GO terms from Neighborhoods
BP GO:0060297 regulation of sarcomere organization IEP Predict GO terms from Neighborhoods
BP GO:0060298 positive regulation of sarcomere organization IEP Predict GO terms from Neighborhoods
MF GO:0061631 ubiquitin conjugating enzyme activity IEP Predict GO terms from Neighborhoods
BP GO:0061726 mitochondrion disassembly IEP Predict GO terms from Neighborhoods
BP GO:0062211 root regeneration IEP Predict GO terms from Neighborhoods
BP GO:0070483 detection of hypoxia IEP Predict GO terms from Neighborhoods
BP GO:0070647 protein modification by small protein conjugation or removal IEP Predict GO terms from Neighborhoods
BP GO:0070861 regulation of protein exit from endoplasmic reticulum IEP Predict GO terms from Neighborhoods
BP GO:0070862 negative regulation of protein exit from endoplasmic reticulum IEP Predict GO terms from Neighborhoods
BP GO:0071453 cellular response to oxygen levels IEP Predict GO terms from Neighborhoods
BP GO:0071454 cellular response to anoxia IEP Predict GO terms from Neighborhoods
BP GO:0071456 cellular response to hypoxia IEP Predict GO terms from Neighborhoods
BP GO:0071496 cellular response to external stimulus IEP Predict GO terms from Neighborhoods
BP GO:0071497 cellular response to freezing IEP Predict GO terms from Neighborhoods
BP GO:0080159 zygote elongation IEP Predict GO terms from Neighborhoods
BP GO:0090317 negative regulation of intracellular protein transport IEP Predict GO terms from Neighborhoods
BP GO:0090398 cellular senescence IEP Predict GO terms from Neighborhoods
BP GO:0090400 stress-induced premature senescence IEP Predict GO terms from Neighborhoods
BP GO:0090709 regulation of timing of plant organ formation IEP Predict GO terms from Neighborhoods
BP GO:0098542 defense response to other organism IEP Predict GO terms from Neighborhoods
CC GO:0098563 intrinsic component of synaptic vesicle membrane IEP Predict GO terms from Neighborhoods
CC GO:0098993 anchored component of synaptic vesicle membrane IEP Predict GO terms from Neighborhoods
BP GO:0099120 socially cooperative development IEP Predict GO terms from Neighborhoods
MF GO:0102351 gamma-aminobutyrate transaminase (glyoxylate dependent) activity IEP Predict GO terms from Neighborhoods
BP GO:0110020 regulation of actomyosin structure organization IEP Predict GO terms from Neighborhoods
BP GO:0120178 steroid hormone biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1901348 positive regulation of secondary cell wall biogenesis IEP Predict GO terms from Neighborhoods
BP GO:1901403 positive regulation of tetrapyrrole metabolic process IEP Predict GO terms from Neighborhoods
BP GO:1901404 regulation of tetrapyrrole catabolic process IEP Predict GO terms from Neighborhoods
BP GO:1901406 positive regulation of tetrapyrrole catabolic process IEP Predict GO terms from Neighborhoods
BP GO:1901565 organonitrogen compound catabolic process IEP Predict GO terms from Neighborhoods
BP GO:1902074 response to salt IEP Predict GO terms from Neighborhoods
BP GO:1902457 negative regulation of stomatal opening IEP Predict GO terms from Neighborhoods
BP GO:1902991 regulation of amyloid precursor protein catabolic process IEP Predict GO terms from Neighborhoods
BP GO:1903340 positive regulation of cell wall organization or biogenesis IEP Predict GO terms from Neighborhoods
BP GO:1903428 positive regulation of reactive oxygen species biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1903555 regulation of tumor necrosis factor superfamily cytokine production IEP Predict GO terms from Neighborhoods
BP GO:1903648 positive regulation of chlorophyll catabolic process IEP Predict GO terms from Neighborhoods
BP GO:1904152 regulation of retrograde protein transport, ER to cytosol IEP Predict GO terms from Neighborhoods
BP GO:1904153 negative regulation of retrograde protein transport, ER to cytosol IEP Predict GO terms from Neighborhoods
BP GO:1904248 regulation of age-related resistance IEP Predict GO terms from Neighborhoods
BP GO:1904250 positive regulation of age-related resistance IEP Predict GO terms from Neighborhoods
BP GO:2000014 regulation of endosperm development IEP Predict GO terms from Neighborhoods
BP GO:2000693 positive regulation of seed maturation IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 86 106
IPR002048 EF_hand_dom 152 179
IPR011992 EF-hand-dom_pair 69 246
No external refs found!