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  5. SOLTUB.AGRIA.G00000038613

SOLTUB.AGRIA.G00000038613


Description : Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family


Gene families : OG_02_0007066 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000038613
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_134


Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000138 Golgi trans cisterna IEP Predict GO terms from Neighborhoods
CC GO:0000159 protein phosphatase type 2A complex IEP Predict GO terms from Neighborhoods
BP GO:0000271 polysaccharide biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0001837 epithelial to mesenchymal transition IEP Predict GO terms from Neighborhoods
BP GO:0002064 epithelial cell development IEP Predict GO terms from Neighborhoods
BP GO:0002066 columnar/cuboidal epithelial cell development IEP Predict GO terms from Neighborhoods
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Predict GO terms from Neighborhoods
CC GO:0005768 endosome IEP Predict GO terms from Neighborhoods
CC GO:0005801 cis-Golgi network IEP Predict GO terms from Neighborhoods
BP GO:0005975 carbohydrate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0005976 polysaccharide metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006901 vesicle coating IEP Predict GO terms from Neighborhoods
BP GO:0007051 spindle organization IEP Predict GO terms from Neighborhoods
BP GO:0007052 mitotic spindle organization IEP Predict GO terms from Neighborhoods
MF GO:0008160 protein tyrosine phosphatase activator activity IEP Predict GO terms from Neighborhoods
MF GO:0008234 cysteine-type peptidase activity IEP Predict GO terms from Neighborhoods
CC GO:0008287 protein serine/threonine phosphatase complex IEP Predict GO terms from Neighborhoods
BP GO:0008643 carbohydrate transport IEP Predict GO terms from Neighborhoods
BP GO:0009059 macromolecule biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009250 glucan biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0010393 galacturonan metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0010563 negative regulation of phosphorus metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0010921 regulation of phosphatase activity IEP Predict GO terms from Neighborhoods
BP GO:0010922 positive regulation of phosphatase activity IEP Predict GO terms from Neighborhoods
BP GO:0010923 negative regulation of phosphatase activity IEP Predict GO terms from Neighborhoods
BP GO:0010950 positive regulation of endopeptidase activity IEP Predict GO terms from Neighborhoods
BP GO:0010952 positive regulation of peptidase activity IEP Predict GO terms from Neighborhoods
BP GO:0014029 neural crest formation IEP Predict GO terms from Neighborhoods
BP GO:0014032 neural crest cell development IEP Predict GO terms from Neighborhoods
BP GO:0015774 polysaccharide transport IEP Predict GO terms from Neighborhoods
CC GO:0016021 integral component of membrane IEP Predict GO terms from Neighborhoods
BP GO:0016051 carbohydrate biosynthetic process IEP Predict GO terms from Neighborhoods
MF GO:0016763 pentosyltransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0016859 cis-trans isomerase activity IEP Predict GO terms from Neighborhoods
MF GO:0016887 ATP hydrolysis activity IEP Predict GO terms from Neighborhoods
MF GO:0019208 phosphatase regulator activity IEP Predict GO terms from Neighborhoods
MF GO:0019211 phosphatase activator activity IEP Predict GO terms from Neighborhoods
MF GO:0019888 protein phosphatase regulator activity IEP Predict GO terms from Neighborhoods
MF GO:0019902 phosphatase binding IEP Predict GO terms from Neighborhoods
MF GO:0019903 protein phosphatase binding IEP Predict GO terms from Neighborhoods
CC GO:0030117 membrane coat IEP Predict GO terms from Neighborhoods
CC GO:0030120 vesicle coat IEP Predict GO terms from Neighborhoods
CC GO:0030127 COPII vesicle coat IEP Predict GO terms from Neighborhoods
CC GO:0030134 COPII-coated ER to Golgi transport vesicle IEP Predict GO terms from Neighborhoods
CC GO:0030135 coated vesicle IEP Predict GO terms from Neighborhoods
BP GO:0030243 cellulose metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0030244 cellulose biosynthetic process IEP Predict GO terms from Neighborhoods
MF GO:0030674 protein-macromolecule adaptor activity IEP Predict GO terms from Neighborhoods
BP GO:0031221 arabinan metabolic process IEP Predict GO terms from Neighborhoods
CC GO:0031224 intrinsic component of membrane IEP Predict GO terms from Neighborhoods
BP GO:0031396 regulation of protein ubiquitination IEP Predict GO terms from Neighborhoods
BP GO:0031398 positive regulation of protein ubiquitination IEP Predict GO terms from Neighborhoods
BP GO:0031399 regulation of protein modification process IEP Predict GO terms from Neighborhoods
BP GO:0031401 positive regulation of protein modification process IEP Predict GO terms from Neighborhoods
CC GO:0031463 Cul3-RING ubiquitin ligase complex IEP Predict GO terms from Neighborhoods
CC GO:0031984 organelle subcompartment IEP Predict GO terms from Neighborhoods
CC GO:0031985 Golgi cisterna IEP Predict GO terms from Neighborhoods
BP GO:0032515 negative regulation of phosphoprotein phosphatase activity IEP Predict GO terms from Neighborhoods
BP GO:0032516 positive regulation of phosphoprotein phosphatase activity IEP Predict GO terms from Neighborhoods
CC GO:0032586 protein storage vacuole membrane IEP Predict GO terms from Neighborhoods
CC GO:0032588 trans-Golgi network membrane IEP Predict GO terms from Neighborhoods
BP GO:0034406 cell wall beta-glucan metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0034410 cell wall beta-glucan biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0034645 cellular macromolecule biosynthetic process IEP Predict GO terms from Neighborhoods
CC GO:0034702 ion channel complex IEP Predict GO terms from Neighborhoods
CC GO:0034703 cation channel complex IEP Predict GO terms from Neighborhoods
CC GO:0034704 calcium channel complex IEP Predict GO terms from Neighborhoods
BP GO:0035303 regulation of dephosphorylation IEP Predict GO terms from Neighborhoods
BP GO:0035304 regulation of protein dephosphorylation IEP Predict GO terms from Neighborhoods
BP GO:0035305 negative regulation of dephosphorylation IEP Predict GO terms from Neighborhoods
BP GO:0035306 positive regulation of dephosphorylation IEP Predict GO terms from Neighborhoods
BP GO:0035307 positive regulation of protein dephosphorylation IEP Predict GO terms from Neighborhoods
BP GO:0035308 negative regulation of protein dephosphorylation IEP Predict GO terms from Neighborhoods
BP GO:0035884 arabinan biosynthetic process IEP Predict GO terms from Neighborhoods
MF GO:0042802 identical protein binding IEP Predict GO terms from Neighborhoods
MF GO:0042803 protein homodimerization activity IEP Predict GO terms from Neighborhoods
BP GO:0043065 positive regulation of apoptotic process IEP Predict GO terms from Neighborhoods
BP GO:0043085 positive regulation of catalytic activity IEP Predict GO terms from Neighborhoods
BP GO:0043280 positive regulation of cysteine-type endopeptidase activity involved in apoptotic process IEP Predict GO terms from Neighborhoods
BP GO:0043281 regulation of cysteine-type endopeptidase activity involved in apoptotic process IEP Predict GO terms from Neighborhoods
BP GO:0043666 regulation of phosphoprotein phosphatase activity IEP Predict GO terms from Neighborhoods
BP GO:0044038 cell wall macromolecule biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0044093 positive regulation of molecular function IEP Predict GO terms from Neighborhoods
BP GO:0045488 pectin metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0045489 pectin biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0045936 negative regulation of phosphate metabolic process IEP Predict GO terms from Neighborhoods
MF GO:0046983 protein dimerization activity IEP Predict GO terms from Neighborhoods
BP GO:0048208 COPII vesicle coating IEP Predict GO terms from Neighborhoods
MF GO:0048306 calcium-dependent protein binding IEP Predict GO terms from Neighborhoods
BP GO:0048468 cell development IEP Predict GO terms from Neighborhoods
BP GO:0048762 mesenchymal cell differentiation IEP Predict GO terms from Neighborhoods
BP GO:0048766 root hair initiation IEP Predict GO terms from Neighborhoods
BP GO:0048864 stem cell development IEP Predict GO terms from Neighborhoods
BP GO:0050790 regulation of catalytic activity IEP Predict GO terms from Neighborhoods
BP GO:0051247 positive regulation of protein metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0051273 beta-glucan metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0051274 beta-glucan biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0051336 regulation of hydrolase activity IEP Predict GO terms from Neighborhoods
BP GO:0051345 positive regulation of hydrolase activity IEP Predict GO terms from Neighborhoods
BP GO:0051346 negative regulation of hydrolase activity IEP Predict GO terms from Neighborhoods
BP GO:0051592 response to calcium ion IEP Predict GO terms from Neighborhoods
MF GO:0051721 protein phosphatase 2A binding IEP Predict GO terms from Neighborhoods
BP GO:0052324 plant-type cell wall cellulose biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0052541 plant-type cell wall cellulose metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0052547 regulation of peptidase activity IEP Predict GO terms from Neighborhoods
BP GO:0052548 regulation of endopeptidase activity IEP Predict GO terms from Neighborhoods
BP GO:0060576 intestinal epithelial cell development IEP Predict GO terms from Neighborhoods
BP GO:0070589 cellular component macromolecule biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0070592 cell wall polysaccharide biosynthetic process IEP Predict GO terms from Neighborhoods
MF GO:0072542 protein phosphatase activator activity IEP Predict GO terms from Neighborhoods
CC GO:0098791 Golgi apparatus subcompartment IEP Predict GO terms from Neighborhoods
CC GO:0098796 membrane protein complex IEP Predict GO terms from Neighborhoods
MF GO:0140767 enzyme-substrate adaptor activity IEP Predict GO terms from Neighborhoods
CC GO:1902495 transmembrane transporter complex IEP Predict GO terms from Neighborhoods
BP GO:1902525 regulation of protein monoubiquitination IEP Predict GO terms from Neighborhoods
BP GO:1902527 positive regulation of protein monoubiquitination IEP Predict GO terms from Neighborhoods
BP GO:1902850 microtubule cytoskeleton organization involved in mitosis IEP Predict GO terms from Neighborhoods
CC GO:1903293 phosphatase complex IEP Predict GO terms from Neighborhoods
BP GO:1903320 regulation of protein modification by small protein conjugation or removal IEP Predict GO terms from Neighborhoods
BP GO:1903322 positive regulation of protein modification by small protein conjugation or removal IEP Predict GO terms from Neighborhoods
CC GO:1990351 transporter complex IEP Predict GO terms from Neighborhoods
MF GO:1990756 ubiquitin ligase-substrate adaptor activity IEP Predict GO terms from Neighborhoods
BP GO:2000116 regulation of cysteine-type endopeptidase activity IEP Predict GO terms from Neighborhoods
BP GO:2001056 positive regulation of cysteine-type endopeptidase activity IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR004864 LEA_2 128 224
No external refs found!