SOLTUB.AGRIA.G00000038646

Description : Energy-coupling factor transporter ATP-binding protein EcfA1

Gene families : OG_02_0011330 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000038646
Cluster	HCCA Clusters (HRR 50 & PCC 0.5): Cluster_200

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	IEA	AHRD
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	AHRD
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006996	organelle organization	None	Extended
BP	GO:0008150	biological_process	None	Extended
CC	GO:0009528	plastid inner membrane	None	Extended
BP	GO:0009657	plastid organization	None	Extended
BP	GO:0009658	chloroplast organization	IEA	AHRD
CC	GO:0009706	chloroplast inner membrane	IEA	AHRD
BP	GO:0009987	cellular process	None	Extended
CC	GO:0016020	membrane	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
CC	GO:0019866	organelle inner membrane	None	Extended
CC	GO:0031090	organelle membrane	None	Extended
CC	GO:0031969	chloroplast membrane	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
CC	GO:0042170	plastid membrane	None	Extended
BP	GO:0042592	homeostatic process	None	Extended
BP	GO:0048878	chemical homeostasis	None	Extended
BP	GO:0050801	ion homeostasis	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055065	metal ion homeostasis	None	Extended
BP	GO:0055076	transition metal ion homeostasis	IEA	AHRD
BP	GO:0055080	cation homeostasis	None	Extended
BP	GO:0055085	transmembrane transport	IEA	AHRD
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0065008	regulation of biological quality	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
BP	GO:0098771	inorganic ion homeostasis	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0001510	RNA methylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0002128	tRNA nucleoside ribose methylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0002130	wobble position ribose methylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0002131	wobble position cytosine ribose methylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0002132	wobble position uridine ribose methylation	IEP	Predict GO terms from Neighborhoods
MF	GO:0004417	hydroxyethylthiazole kinase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0005982	starch metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006400	tRNA modification	IEP	Predict GO terms from Neighborhoods
BP	GO:0006725	cellular aromatic compound metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006766	vitamin metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006767	water-soluble vitamin metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006772	thiamine metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0008033	tRNA processing	IEP	Predict GO terms from Neighborhoods
MF	GO:0008171	O-methyltransferase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0008173	RNA methyltransferase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0008175	tRNA methyltransferase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0008655	pyrimidine-containing compound salvage	IEP	Predict GO terms from Neighborhoods
MF	GO:0008878	glucose-1-phosphate adenylyltransferase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0009058	biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009110	vitamin biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009228	thiamine biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009690	cytokinin metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009691	cytokinin biosynthetic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0016300	tRNA (uracil) methyltransferase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0016427	tRNA (cytosine) methyltransferase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0016740	transferase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	IEP	Predict GO terms from Neighborhoods
MF	GO:0016779	nucleotidyltransferase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0016799	hydrolase activity, hydrolyzing N-glycosyl compounds	IEP	Predict GO terms from Neighborhoods
BP	GO:0030488	tRNA methylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0034308	primary alcohol metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0034309	primary alcohol biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0036172	thiamine salvage	IEP	Predict GO terms from Neighborhoods
BP	GO:0042364	water-soluble vitamin biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0042446	hormone biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0042723	thiamine-containing compound metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0042724	thiamine-containing compound biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0043094	cellular metabolic compound salvage	IEP	Predict GO terms from Neighborhoods
BP	GO:0046165	alcohol biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0046483	heterocycle metabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0052665	tRNA (uracil-2'-O-)-methyltransferase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0052666	tRNA (cytosine-2'-O-)-methyltransferase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0062105	RNA 2'-O-methyltransferase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0070566	adenylyltransferase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0072527	pyrimidine-containing compound metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0072528	pyrimidine-containing compound biosynthetic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0102682	N6-(Delta2-isopentenyl)-adenosine 5'-monophosphate phosphoribohydrolase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0106050	tRNA 2'-O-methyltransferase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0140101	catalytic activity, acting on a tRNA	IEP	Predict GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR003439	ABC_transporter-like_ATP-bd	59	164
IPR027417	P-loop_NTPase	23	228

External Links

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SOLTUB.AGRIA.G00000038646

Expression Profile

Co-expression Networks

Functional Annotation