SOLTUB.AGRIA.G00000038722


Description : ATP-dependent zinc metalloprotease FtsH


Gene families : OG_02_0011342 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000038722
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_216


Type GO Term Name Evidence Source
MF GO:0004176 ATP-dependent peptidase activity IEA AHRD
MF GO:0004222 metalloendopeptidase activity IEA AHRD
MF GO:0005515 protein binding IEA AHRD
MF GO:0005524 ATP binding IEA AHRD
BP GO:0006457 protein folding IEA AHRD
BP GO:0006515 protein quality control for misfolded or incompletely synthesized proteins IEA AHRD
BP GO:0008283 cell population proliferation IEA AHRD
CC GO:0009534 chloroplast thylakoid IEA AHRD
CC GO:0009941 chloroplast envelope IEA AHRD
BP GO:0010073 meristem maintenance IEA AHRD
BP GO:0010304 PSII associated light-harvesting complex II catabolic process IEA AHRD
CC GO:0016021 integral component of membrane IEA AHRD
BP GO:0030150 protein import into mitochondrial matrix IEA AHRD
CC GO:0031942 i-AAA complex IEA AHRD
BP GO:0034214 protein hexamerization IEA AHRD
BP GO:0034982 mitochondrial protein processing IEA AHRD
BP GO:0035694 mitochondrial protein catabolic process IEA AHRD
BP GO:0043066 negative regulation of apoptotic process IEA AHRD
BP GO:0045041 protein import into mitochondrial intermembrane space IEA AHRD
MF GO:0046872 metal ion binding IEA AHRD
Type GO Term Name Evidence Source
MF GO:0000048 peptidyltransferase activity IEP Predict GO terms from Neighborhoods
BP GO:0000097 sulfur amino acid biosynthetic process IEP Predict GO terms from Neighborhoods
MF GO:0000285 1-phosphatidylinositol-3-phosphate 5-kinase activity IEP Predict GO terms from Neighborhoods
BP GO:0000290 deadenylation-dependent decapping of nuclear-transcribed mRNA IEP Predict GO terms from Neighborhoods
BP GO:0000373 Group II intron splicing IEP Predict GO terms from Neighborhoods
BP GO:0000460 maturation of 5.8S rRNA IEP Predict GO terms from Neighborhoods
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP Predict GO terms from Neighborhoods
MF GO:0001653 peptide receptor activity IEP Predict GO terms from Neighborhoods
BP GO:0002478 antigen processing and presentation of exogenous peptide antigen IEP Predict GO terms from Neighborhoods
BP GO:0002495 antigen processing and presentation of peptide antigen via MHC class II IEP Predict GO terms from Neighborhoods
BP GO:0002504 antigen processing and presentation of peptide or polysaccharide antigen via MHC class II IEP Predict GO terms from Neighborhoods
MF GO:0004674 protein serine/threonine kinase activity IEP Predict GO terms from Neighborhoods
MF GO:0005253 anion channel activity IEP Predict GO terms from Neighborhoods
MF GO:0005310 dicarboxylic acid transmembrane transporter activity IEP Predict GO terms from Neighborhoods
CC GO:0005615 extracellular space IEP Predict GO terms from Neighborhoods
BP GO:0006401 RNA catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006402 mRNA catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006468 protein phosphorylation IEP Predict GO terms from Neighborhoods
BP GO:0006534 cysteine metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006661 phosphatidylinositol biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0006691 leukotriene metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006750 glutathione biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0006751 glutathione catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006805 xenobiotic metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006808 regulation of nitrogen utilization IEP Predict GO terms from Neighborhoods
BP GO:0006809 nitric oxide biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0006811 ion transport IEP Predict GO terms from Neighborhoods
BP GO:0006820 anion transport IEP Predict GO terms from Neighborhoods
BP GO:0006935 chemotaxis IEP Predict GO terms from Neighborhoods
BP GO:0006950 response to stress IEP Predict GO terms from Neighborhoods
BP GO:0006979 response to oxidative stress IEP Predict GO terms from Neighborhoods
MF GO:0008131 primary amine oxidase activity IEP Predict GO terms from Neighborhoods
MF GO:0008234 cysteine-type peptidase activity IEP Predict GO terms from Neighborhoods
MF GO:0008242 omega peptidase activity IEP Predict GO terms from Neighborhoods
BP GO:0008333 endosome to lysosome transport IEP Predict GO terms from Neighborhoods
BP GO:0008380 RNA splicing IEP Predict GO terms from Neighborhoods
BP GO:0009070 serine family amino acid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009267 cellular response to starvation IEP Predict GO terms from Neighborhoods
BP GO:0009410 response to xenobiotic stimulus IEP Predict GO terms from Neighborhoods
BP GO:0009451 RNA modification IEP Predict GO terms from Neighborhoods
BP GO:0009585 red, far-red light phototransduction IEP Predict GO terms from Neighborhoods
BP GO:0009605 response to external stimulus IEP Predict GO terms from Neighborhoods
BP GO:0009607 response to biotic stimulus IEP Predict GO terms from Neighborhoods
BP GO:0009617 response to bacterium IEP Predict GO terms from Neighborhoods
BP GO:0009791 post-embryonic development IEP Predict GO terms from Neighborhoods
BP GO:0009888 tissue development IEP Predict GO terms from Neighborhoods
BP GO:0009939 positive regulation of gibberellic acid mediated signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0009991 response to extracellular stimulus IEP Predict GO terms from Neighborhoods
BP GO:0010031 circumnutation IEP Predict GO terms from Neighborhoods
BP GO:0010044 response to aluminum ion IEP Predict GO terms from Neighborhoods
BP GO:0010051 xylem and phloem pattern formation IEP Predict GO terms from Neighborhoods
BP GO:0010075 regulation of meristem growth IEP Predict GO terms from Neighborhoods
BP GO:0010118 stomatal movement IEP Predict GO terms from Neighborhoods
BP GO:0010247 detection of phosphate ion IEP Predict GO terms from Neighborhoods
BP GO:0010256 endomembrane system organization IEP Predict GO terms from Neighborhoods
BP GO:0010311 lateral root formation IEP Predict GO terms from Neighborhoods
BP GO:0010497 plasmodesmata-mediated intercellular transport IEP Predict GO terms from Neighborhoods
BP GO:0010555 response to mannitol IEP Predict GO terms from Neighborhoods
BP GO:0010629 negative regulation of gene expression IEP Predict GO terms from Neighborhoods
MF GO:0015140 malate transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0015556 C4-dicarboxylate transmembrane transporter activity IEP Predict GO terms from Neighborhoods
BP GO:0015698 inorganic anion transport IEP Predict GO terms from Neighborhoods
BP GO:0015711 organic anion transport IEP Predict GO terms from Neighborhoods
BP GO:0015740 C4-dicarboxylate transport IEP Predict GO terms from Neighborhoods
BP GO:0015743 malate transport IEP Predict GO terms from Neighborhoods
BP GO:0016036 cellular response to phosphate starvation IEP Predict GO terms from Neighborhoods
BP GO:0016071 mRNA metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0016073 snRNA metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0016180 snRNA processing IEP Predict GO terms from Neighborhoods
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP Predict GO terms from Neighborhoods
MF GO:0016308 1-phosphatidylinositol-4-phosphate 5-kinase activity IEP Predict GO terms from Neighborhoods
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP Predict GO terms from Neighborhoods
MF GO:0016641 oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor IEP Predict GO terms from Neighborhoods
MF GO:0016755 aminoacyltransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0016756 glutathione gamma-glutamylcysteinyltransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0016776 phosphotransferase activity, phosphate group as acceptor IEP Predict GO terms from Neighborhoods
MF GO:0016791 phosphatase activity IEP Predict GO terms from Neighborhoods
MF GO:0017046 peptide hormone binding IEP Predict GO terms from Neighborhoods
BP GO:0018105 peptidyl-serine phosphorylation IEP Predict GO terms from Neighborhoods
BP GO:0018209 peptidyl-serine modification IEP Predict GO terms from Neighborhoods
BP GO:0019065 receptor-mediated endocytosis of virus by host cell IEP Predict GO terms from Neighborhoods
BP GO:0019184 nonribosomal peptide biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0019344 cysteine biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0019370 leukotriene biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0019827 stem cell population maintenance IEP Predict GO terms from Neighborhoods
BP GO:0019882 antigen processing and presentation IEP Predict GO terms from Neighborhoods
BP GO:0019884 antigen processing and presentation of exogenous antigen IEP Predict GO terms from Neighborhoods
BP GO:0019886 antigen processing and presentation of exogenous peptide antigen via MHC class II IEP Predict GO terms from Neighborhoods
CC GO:0030288 outer membrane-bounded periplasmic space IEP Predict GO terms from Neighborhoods
BP GO:0030593 neutrophil chemotaxis IEP Predict GO terms from Neighborhoods
BP GO:0030595 leukocyte chemotaxis IEP Predict GO terms from Neighborhoods
BP GO:0030641 regulation of cellular pH IEP Predict GO terms from Neighborhoods
CC GO:0030670 phagocytic vesicle membrane IEP Predict GO terms from Neighborhoods
BP GO:0031100 animal organ regeneration IEP Predict GO terms from Neighborhoods
BP GO:0031125 rRNA 3'-end processing IEP Predict GO terms from Neighborhoods
BP GO:0031179 peptide modification IEP Predict GO terms from Neighborhoods
BP GO:0031537 regulation of anthocyanin metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0031667 response to nutrient levels IEP Predict GO terms from Neighborhoods
CC GO:0031901 early endosome membrane IEP Predict GO terms from Neighborhoods
CC GO:0031902 late endosome membrane IEP Predict GO terms from Neighborhoods
BP GO:0032288 myelin assembly IEP Predict GO terms from Neighborhoods
BP GO:0032355 response to estradiol IEP Predict GO terms from Neighborhoods
BP GO:0032438 melanosome organization IEP Predict GO terms from Neighborhoods
BP GO:0032502 developmental process IEP Predict GO terms from Neighborhoods
BP GO:0033206 meiotic cytokinesis IEP Predict GO terms from Neighborhoods
BP GO:0034472 snRNA 3'-end processing IEP Predict GO terms from Neighborhoods
MF GO:0034593 phosphatidylinositol bisphosphate phosphatase activity IEP Predict GO terms from Neighborhoods
MF GO:0034595 phosphatidylinositol phosphate 5-phosphatase activity IEP Predict GO terms from Neighborhoods
BP GO:0034612 response to tumor necrosis factor IEP Predict GO terms from Neighborhoods
BP GO:0034635 glutathione transport IEP Predict GO terms from Neighborhoods
BP GO:0034655 nucleobase-containing compound catabolic process IEP Predict GO terms from Neighborhoods
MF GO:0034722 gamma-glutamyl-peptidase activity IEP Predict GO terms from Neighborhoods
BP GO:0034775 glutathione transmembrane transport IEP Predict GO terms from Neighborhoods
BP GO:0035443 tripeptide transmembrane transport IEP Predict GO terms from Neighborhoods
CC GO:0035618 root hair IEP Predict GO terms from Neighborhoods
BP GO:0035672 oligopeptide transmembrane transport IEP Predict GO terms from Neighborhoods
CC GO:0035770 ribonucleoprotein granule IEP Predict GO terms from Neighborhoods
BP GO:0036289 peptidyl-serine autophosphorylation IEP Predict GO terms from Neighborhoods
MF GO:0036374 glutathione hydrolase activity IEP Predict GO terms from Neighborhoods
CC GO:0036464 cytoplasmic ribonucleoprotein granule IEP Predict GO terms from Neighborhoods
BP GO:0040011 locomotion IEP Predict GO terms from Neighborhoods
BP GO:0042219 cellular modified amino acid catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0042330 taxis IEP Predict GO terms from Neighborhoods
BP GO:0042398 cellular modified amino acid biosynthetic process IEP Predict GO terms from Neighborhoods
MF GO:0042562 hormone binding IEP Predict GO terms from Neighborhoods
MF GO:0042578 phosphoric ester hydrolase activity IEP Predict GO terms from Neighborhoods
BP GO:0042594 response to starvation IEP Predict GO terms from Neighborhoods
CC GO:0042597 periplasmic space IEP Predict GO terms from Neighborhoods
BP GO:0042742 defense response to bacterium IEP Predict GO terms from Neighborhoods
BP GO:0042939 tripeptide transport IEP Predict GO terms from Neighborhoods
BP GO:0043102 amino acid salvage IEP Predict GO terms from Neighborhoods
BP GO:0043171 peptide catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0043207 response to external biotic stimulus IEP Predict GO terms from Neighborhoods
CC GO:0043226 organelle IEP Predict GO terms from Neighborhoods
CC GO:0043227 membrane-bounded organelle IEP Predict GO terms from Neighborhoods
CC GO:0043229 intracellular organelle IEP Predict GO terms from Neighborhoods
CC GO:0043231 intracellular membrane-bounded organelle IEP Predict GO terms from Neighborhoods
BP GO:0043628 small regulatory ncRNA 3'-end processing IEP Predict GO terms from Neighborhoods
BP GO:0043633 polyadenylation-dependent RNA catabolic process IEP Predict GO terms from Neighborhoods
MF GO:0043813 phosphatidylinositol-3,5-bisphosphate 5-phosphatase activity IEP Predict GO terms from Neighborhoods
BP GO:0044088 regulation of vacuole organization IEP Predict GO terms from Neighborhoods
BP GO:0044270 cellular nitrogen compound catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0044273 sulfur compound catabolic process IEP Predict GO terms from Neighborhoods
CC GO:0045169 fusome IEP Predict GO terms from Neighborhoods
BP GO:0046209 nitric oxide metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0046456 icosanoid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0046700 heterocycle catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0046794 transport of virus IEP Predict GO terms from Neighborhoods
BP GO:0046854 phosphatidylinositol phosphate biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0048002 antigen processing and presentation of peptide antigen IEP Predict GO terms from Neighborhoods
BP GO:0048366 leaf development IEP Predict GO terms from Neighborhoods
CC GO:0048471 perinuclear region of cytoplasm IEP Predict GO terms from Neighborhoods
BP GO:0048638 regulation of developmental growth IEP Predict GO terms from Neighborhoods
BP GO:0048753 pigment granule organization IEP Predict GO terms from Neighborhoods
BP GO:0048856 anatomical structure development IEP Predict GO terms from Neighborhoods
BP GO:0048863 stem cell differentiation IEP Predict GO terms from Neighborhoods
BP GO:0050727 regulation of inflammatory response IEP Predict GO terms from Neighborhoods
BP GO:0050829 defense response to Gram-negative bacterium IEP Predict GO terms from Neighborhoods
BP GO:0050879 multicellular organismal movement IEP Predict GO terms from Neighborhoods
BP GO:0050896 response to stimulus IEP Predict GO terms from Neighborhoods
BP GO:0050900 leukocyte migration IEP Predict GO terms from Neighborhoods
MF GO:0051427 hormone receptor binding IEP Predict GO terms from Neighborhoods
MF GO:0051428 peptide hormone receptor binding IEP Predict GO terms from Neighborhoods
BP GO:0051452 intracellular pH reduction IEP Predict GO terms from Neighborhoods
BP GO:0051453 regulation of intracellular pH IEP Predict GO terms from Neighborhoods
BP GO:0051716 cellular response to stimulus IEP Predict GO terms from Neighborhoods
MF GO:0052597 diamine oxidase activity IEP Predict GO terms from Neighborhoods
MF GO:0052742 phosphatidylinositol kinase activity IEP Predict GO terms from Neighborhoods
MF GO:0052810 1-phosphatidylinositol-5-kinase activity IEP Predict GO terms from Neighborhoods
MF GO:0052866 phosphatidylinositol phosphate phosphatase activity IEP Predict GO terms from Neighborhoods
BP GO:0060326 cell chemotaxis IEP Predict GO terms from Neighborhoods
BP GO:0060866 leaf abscission IEP Predict GO terms from Neighborhoods
BP GO:0060968 obsolete regulation of gene silencing IEP Predict GO terms from Neighborhoods
BP GO:0061017 hepatoblast differentiation IEP Predict GO terms from Neighborhoods
MF GO:0070003 threonine-type peptidase activity IEP Predict GO terms from Neighborhoods
BP GO:0070365 hepatocyte differentiation IEP Predict GO terms from Neighborhoods
BP GO:0071423 malate transmembrane transport IEP Predict GO terms from Neighborhoods
BP GO:0071621 granulocyte chemotaxis IEP Predict GO terms from Neighborhoods
BP GO:0072337 modified amino acid transport IEP Predict GO terms from Neighborhoods
BP GO:0075509 endocytosis involved in viral entry into host cell IEP Predict GO terms from Neighborhoods
BP GO:0080036 regulation of cytokinin-activated signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0080113 regulation of seed growth IEP Predict GO terms from Neighborhoods
BP GO:0080183 response to photooxidative stress IEP Predict GO terms from Neighborhoods
BP GO:0090059 protoxylem development IEP Predict GO terms from Neighborhoods
BP GO:0090332 stomatal closure IEP Predict GO terms from Neighborhoods
BP GO:0090383 phagosome acidification IEP Predict GO terms from Neighborhoods
BP GO:0090385 phagosome-lysosome fusion IEP Predict GO terms from Neighborhoods
BP GO:0090503 RNA phosphodiester bond hydrolysis, exonucleolytic IEP Predict GO terms from Neighborhoods
BP GO:0090506 axillary shoot meristem initiation IEP Predict GO terms from Neighborhoods
BP GO:0090548 response to nitrate starvation IEP Predict GO terms from Neighborhoods
BP GO:0097184 response to azide IEP Predict GO terms from Neighborhoods
BP GO:0097185 cellular response to azide IEP Predict GO terms from Neighborhoods
BP GO:0097264 self proteolysis IEP Predict GO terms from Neighborhoods
BP GO:0097352 autophagosome maturation IEP Predict GO terms from Neighborhoods
BP GO:0097421 liver regeneration IEP Predict GO terms from Neighborhoods
BP GO:0097529 myeloid leukocyte migration IEP Predict GO terms from Neighborhoods
BP GO:0097530 granulocyte migration IEP Predict GO terms from Neighborhoods
BP GO:0098656 anion transmembrane transport IEP Predict GO terms from Neighborhoods
BP GO:0098727 maintenance of cell number IEP Predict GO terms from Neighborhoods
MF GO:0102953 hypoglycin A gamma-glutamyl transpeptidase activity IEP Predict GO terms from Neighborhoods
MF GO:0103068 leukotriene C4 gamma-glutamyl transferase activity IEP Predict GO terms from Neighborhoods
MF GO:0106018 phosphatidylinositol-3,5-bisphosphate phosphatase activity IEP Predict GO terms from Neighborhoods
BP GO:0110154 RNA decapping IEP Predict GO terms from Neighborhoods
BP GO:0110156 methylguanosine-cap decapping IEP Predict GO terms from Neighborhoods
BP GO:1900032 regulation of trichome patterning IEP Predict GO terms from Neighborhoods
BP GO:1900033 negative regulation of trichome patterning IEP Predict GO terms from Neighborhoods
BP GO:1901259 chloroplast rRNA processing IEP Predict GO terms from Neighborhoods
BP GO:1901333 positive regulation of lateral root development IEP Predict GO terms from Neighborhoods
BP GO:1903100 1-phosphatidyl-1D-myo-inositol 3,5-bisphosphate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:1903426 regulation of reactive oxygen species biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1904562 phosphatidylinositol 5-phosphate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:1905161 protein localization to phagocytic vesicle IEP Predict GO terms from Neighborhoods
BP GO:1905393 plant organ formation IEP Predict GO terms from Neighborhoods
BP GO:1905613 regulation of developmental vegetative growth IEP Predict GO terms from Neighborhoods
BP GO:1905614 negative regulation of developmental vegetative growth IEP Predict GO terms from Neighborhoods
BP GO:1905622 negative regulation of leaf development IEP Predict GO terms from Neighborhoods
BP GO:1990110 callus formation IEP Predict GO terms from Neighborhoods
BP GO:1990266 neutrophil migration IEP Predict GO terms from Neighborhoods
BP GO:2000024 regulation of leaf development IEP Predict GO terms from Neighborhoods
BP GO:2000033 regulation of seed dormancy process IEP Predict GO terms from Neighborhoods
BP GO:2000785 regulation of autophagosome assembly IEP Predict GO terms from Neighborhoods
BP GO:2001057 reactive nitrogen species metabolic process IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR041569 AAA_lid_3 421 464
IPR005936 FtsH 221 661
IPR027417 P-loop_NTPase 230 493
IPR037219 Peptidase_M41-like 481 665
IPR003959 ATPase_AAA_core 269 398
IPR000642 Peptidase_M41 480 659
No external refs found!