SOLTUB.AGRIA.G00000038882


Description : F-box/WD-40 repeat-containing protein


Gene families : OG_02_0003026 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000038882
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_124


Type GO Term Name Evidence Source
CC GO:0000123 histone acetyltransferase complex IEA AHRD
MF GO:0005515 protein binding IEA AHRD
CC GO:0005737 cytoplasm IEA AHRD
BP GO:0009892 negative regulation of metabolic process IEA AHRD
BP GO:0009966 regulation of signal transduction IEA AHRD
CC GO:0012505 endomembrane system IEA AHRD
CC GO:0016020 membrane IEA AHRD
BP GO:0016036 cellular response to phosphate starvation IEA AHRD
BP GO:0016573 histone acetylation IEA AHRD
BP GO:0031326 regulation of cellular biosynthetic process IEA AHRD
BP GO:0031401 positive regulation of protein modification process IEA AHRD
BP GO:0032879 regulation of localization IEA AHRD
CC GO:0035097 histone methyltransferase complex IEA AHRD
BP GO:0035295 tube development IEA AHRD
CC GO:0043232 intracellular non-membrane-bounded organelle IEA AHRD
BP GO:0046907 intracellular transport IEA AHRD
BP GO:0048513 animal organ development IEA AHRD
BP GO:0048523 negative regulation of cellular process IEA AHRD
BP GO:0051128 regulation of cellular component organization IEA AHRD
BP GO:0065008 regulation of biological quality IEA AHRD
BP GO:0072359 circulatory system development IEA AHRD
BP GO:1903052 positive regulation of proteolysis involved in protein catabolic process IEA AHRD
Type GO Term Name Evidence Source
BP GO:0000075 cell cycle checkpoint signaling IEP Predict GO terms from Neighborhoods
BP GO:0000077 DNA damage checkpoint signaling IEP Predict GO terms from Neighborhoods
BP GO:0000096 sulfur amino acid metabolic process IEP Predict GO terms from Neighborhoods
CC GO:0000159 protein phosphatase type 2A complex IEP Predict GO terms from Neighborhoods
CC GO:0000775 chromosome, centromeric region IEP Predict GO terms from Neighborhoods
CC GO:0000779 condensed chromosome, centromeric region IEP Predict GO terms from Neighborhoods
BP GO:0000902 cell morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0002683 negative regulation of immune system process IEP Predict GO terms from Neighborhoods
MF GO:0003727 single-stranded RNA binding IEP Predict GO terms from Neighborhoods
MF GO:0003825 alpha,alpha-trehalose-phosphate synthase (UDP-forming) activity IEP Predict GO terms from Neighborhoods
MF GO:0004721 phosphoprotein phosphatase activity IEP Predict GO terms from Neighborhoods
MF GO:0004805 trehalose-phosphatase activity IEP Predict GO terms from Neighborhoods
CC GO:0005677 chromatin silencing complex IEP Predict GO terms from Neighborhoods
CC GO:0005739 mitochondrion IEP Predict GO terms from Neighborhoods
CC GO:0005813 centrosome IEP Predict GO terms from Neighborhoods
CC GO:0005829 cytosol IEP Predict GO terms from Neighborhoods
CC GO:0005946 alpha,alpha-trehalose-phosphate synthase complex (UDP-forming) IEP Predict GO terms from Neighborhoods
BP GO:0005984 disaccharide metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0005991 trehalose metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0005992 trehalose biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0006555 methionine metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006977 DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest IEP Predict GO terms from Neighborhoods
BP GO:0006979 response to oxidative stress IEP Predict GO terms from Neighborhoods
BP GO:0007062 sister chromatid cohesion IEP Predict GO terms from Neighborhoods
BP GO:0007093 mitotic cell cycle checkpoint signaling IEP Predict GO terms from Neighborhoods
BP GO:0007165 signal transduction IEP Predict GO terms from Neighborhoods
BP GO:0007399 nervous system development IEP Predict GO terms from Neighborhoods
MF GO:0008047 enzyme activator activity IEP Predict GO terms from Neighborhoods
MF GO:0008187 poly-pyrimidine tract binding IEP Predict GO terms from Neighborhoods
MF GO:0008266 poly(U) RNA binding IEP Predict GO terms from Neighborhoods
BP GO:0008285 negative regulation of cell population proliferation IEP Predict GO terms from Neighborhoods
CC GO:0008287 protein serine/threonine phosphatase complex IEP Predict GO terms from Neighborhoods
BP GO:0008630 intrinsic apoptotic signaling pathway in response to DNA damage IEP Predict GO terms from Neighborhoods
BP GO:0009066 aspartate family amino acid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009266 response to temperature stimulus IEP Predict GO terms from Neighborhoods
BP GO:0009311 oligosaccharide metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009312 oligosaccharide biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009409 response to cold IEP Predict GO terms from Neighborhoods
BP GO:0009410 response to xenobiotic stimulus IEP Predict GO terms from Neighborhoods
BP GO:0009554 megasporogenesis IEP Predict GO terms from Neighborhoods
BP GO:0009556 microsporogenesis IEP Predict GO terms from Neighborhoods
BP GO:0009628 response to abiotic stimulus IEP Predict GO terms from Neighborhoods
BP GO:0009756 carbohydrate mediated signaling IEP Predict GO terms from Neighborhoods
BP GO:0009759 indole glucosinolate biosynthetic process IEP Predict GO terms from Neighborhoods
CC GO:0009898 cytoplasmic side of plasma membrane IEP Predict GO terms from Neighborhoods
BP GO:0010048 vernalization response IEP Predict GO terms from Neighborhoods
BP GO:0010090 trichome morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0010098 suspensor development IEP Predict GO terms from Neighborhoods
BP GO:0010182 sugar mediated signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0010562 positive regulation of phosphorus metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0010563 negative regulation of phosphorus metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0010921 regulation of phosphatase activity IEP Predict GO terms from Neighborhoods
BP GO:0010948 negative regulation of cell cycle process IEP Predict GO terms from Neighborhoods
BP GO:0016144 S-glycoside biosynthetic process IEP Predict GO terms from Neighborhoods
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Predict GO terms from Neighborhoods
MF GO:0016791 phosphatase activity IEP Predict GO terms from Neighborhoods
MF GO:0019203 carbohydrate phosphatase activity IEP Predict GO terms from Neighborhoods
MF GO:0019208 phosphatase regulator activity IEP Predict GO terms from Neighborhoods
MF GO:0019211 phosphatase activator activity IEP Predict GO terms from Neighborhoods
BP GO:0019217 regulation of fatty acid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0019758 glycosinolate biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0019761 glucosinolate biosynthetic process IEP Predict GO terms from Neighborhoods
MF GO:0019888 protein phosphatase regulator activity IEP Predict GO terms from Neighborhoods
CC GO:0019898 extrinsic component of membrane IEP Predict GO terms from Neighborhoods
BP GO:0022402 cell cycle process IEP Predict GO terms from Neighborhoods
BP GO:0022413 reproductive process in single-celled organism IEP Predict GO terms from Neighborhoods
CC GO:0030018 Z disc IEP Predict GO terms from Neighborhoods
BP GO:0030330 DNA damage response, signal transduction by p53 class mediator IEP Predict GO terms from Neighborhoods
BP GO:0030435 sporulation resulting in formation of a cellular spore IEP Predict GO terms from Neighborhoods
BP GO:0030437 ascospore formation IEP Predict GO terms from Neighborhoods
BP GO:0030447 filamentous growth IEP Predict GO terms from Neighborhoods
BP GO:0031056 regulation of histone modification IEP Predict GO terms from Neighborhoods
BP GO:0031058 positive regulation of histone modification IEP Predict GO terms from Neighborhoods
BP GO:0031060 regulation of histone methylation IEP Predict GO terms from Neighborhoods
BP GO:0031062 positive regulation of histone methylation IEP Predict GO terms from Neighborhoods
BP GO:0031325 positive regulation of cellular metabolic process IEP Predict GO terms from Neighborhoods
CC GO:0031430 M band IEP Predict GO terms from Neighborhoods
CC GO:0031519 PcG protein complex IEP Predict GO terms from Neighborhoods
BP GO:0031570 DNA integrity checkpoint signaling IEP Predict GO terms from Neighborhoods
BP GO:0031571 mitotic G1 DNA damage checkpoint signaling IEP Predict GO terms from Neighborhoods
BP GO:0031998 regulation of fatty acid beta-oxidation IEP Predict GO terms from Neighborhoods
BP GO:0032000 positive regulation of fatty acid beta-oxidation IEP Predict GO terms from Neighborhoods
BP GO:0032501 multicellular organismal process IEP Predict GO terms from Neighborhoods
BP GO:0032922 circadian regulation of gene expression IEP Predict GO terms from Neighborhoods
BP GO:0033353 S-adenosylmethionine cycle IEP Predict GO terms from Neighborhoods
BP GO:0033673 negative regulation of kinase activity IEP Predict GO terms from Neighborhoods
BP GO:0034293 sexual sporulation IEP Predict GO terms from Neighborhoods
BP GO:0034599 cellular response to oxidative stress IEP Predict GO terms from Neighborhoods
BP GO:0034605 cellular response to heat IEP Predict GO terms from Neighborhoods
MF GO:0035064 methylated histone binding IEP Predict GO terms from Neighborhoods
BP GO:0035303 regulation of dephosphorylation IEP Predict GO terms from Neighborhoods
BP GO:0035304 regulation of protein dephosphorylation IEP Predict GO terms from Neighborhoods
BP GO:0035306 positive regulation of dephosphorylation IEP Predict GO terms from Neighborhoods
BP GO:0035307 positive regulation of protein dephosphorylation IEP Predict GO terms from Neighborhoods
BP GO:0036168 filamentous growth of a population of unicellular organisms in response to heat IEP Predict GO terms from Neighborhoods
BP GO:0036180 filamentous growth of a population of unicellular organisms in response to biotic stimulus IEP Predict GO terms from Neighborhoods
BP GO:0040007 growth IEP Predict GO terms from Neighborhoods
BP GO:0040029 epigenetic regulation of gene expression IEP Predict GO terms from Neighborhoods
BP GO:0042326 negative regulation of phosphorylation IEP Predict GO terms from Neighborhoods
BP GO:0042343 indole glucosinolate metabolic process IEP Predict GO terms from Neighborhoods
MF GO:0042393 histone binding IEP Predict GO terms from Neighborhoods
BP GO:0042435 indole-containing compound biosynthetic process IEP Predict GO terms from Neighborhoods
MF GO:0042578 phosphoric ester hydrolase activity IEP Predict GO terms from Neighborhoods
BP GO:0042770 signal transduction in response to DNA damage IEP Predict GO terms from Neighborhoods
BP GO:0042771 intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator IEP Predict GO terms from Neighborhoods
BP GO:0043549 regulation of kinase activity IEP Predict GO terms from Neighborhoods
BP GO:0043550 regulation of lipid kinase activity IEP Predict GO terms from Neighborhoods
BP GO:0043666 regulation of phosphoprotein phosphatase activity IEP Predict GO terms from Neighborhoods
BP GO:0043934 sporulation IEP Predict GO terms from Neighborhoods
BP GO:0043935 sexual sporulation resulting in formation of a cellular spore IEP Predict GO terms from Neighborhoods
BP GO:0044182 filamentous growth of a population of unicellular organisms IEP Predict GO terms from Neighborhoods
BP GO:0044773 mitotic DNA damage checkpoint signaling IEP Predict GO terms from Neighborhoods
BP GO:0044774 mitotic DNA integrity checkpoint signaling IEP Predict GO terms from Neighborhoods
BP GO:0044819 mitotic G1/S transition checkpoint signaling IEP Predict GO terms from Neighborhoods
BP GO:0045786 negative regulation of cell cycle IEP Predict GO terms from Neighborhoods
BP GO:0045814 negative regulation of gene expression, epigenetic IEP Predict GO terms from Neighborhoods
BP GO:0045824 negative regulation of innate immune response IEP Predict GO terms from Neighborhoods
BP GO:0045833 negative regulation of lipid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0045834 positive regulation of lipid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0045923 positive regulation of fatty acid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0045930 negative regulation of mitotic cell cycle IEP Predict GO terms from Neighborhoods
BP GO:0045936 negative regulation of phosphate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0045937 positive regulation of phosphate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0046320 regulation of fatty acid oxidation IEP Predict GO terms from Neighborhoods
BP GO:0046321 positive regulation of fatty acid oxidation IEP Predict GO terms from Neighborhoods
BP GO:0046351 disaccharide biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0046500 S-adenosylmethionine metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0048236 plant-type sporogenesis IEP Predict GO terms from Neighborhoods
BP GO:0048522 positive regulation of cellular process IEP Predict GO terms from Neighborhoods
BP GO:0048584 positive regulation of response to stimulus IEP Predict GO terms from Neighborhoods
BP GO:0048587 regulation of short-day photoperiodism, flowering IEP Predict GO terms from Neighborhoods
BP GO:0048598 embryonic morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0050777 negative regulation of immune response IEP Predict GO terms from Neighborhoods
BP GO:0050994 regulation of lipid catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0050996 positive regulation of lipid catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0051177 meiotic sister chromatid cohesion IEP Predict GO terms from Neighborhoods
BP GO:0051321 meiotic cell cycle IEP Predict GO terms from Neighborhoods
BP GO:0051348 negative regulation of transferase activity IEP Predict GO terms from Neighborhoods
BP GO:0051569 regulation of histone H3-K4 methylation IEP Predict GO terms from Neighborhoods
BP GO:0051570 regulation of histone H3-K9 methylation IEP Predict GO terms from Neighborhoods
BP GO:0051571 positive regulation of histone H3-K4 methylation IEP Predict GO terms from Neighborhoods
BP GO:0051574 positive regulation of histone H3-K9 methylation IEP Predict GO terms from Neighborhoods
BP GO:0061085 regulation of histone H3-K27 methylation IEP Predict GO terms from Neighborhoods
BP GO:0061087 positive regulation of histone H3-K27 methylation IEP Predict GO terms from Neighborhoods
BP GO:0062013 positive regulation of small molecule metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0070192 chromosome organization involved in meiotic cell cycle IEP Predict GO terms from Neighborhoods
BP GO:0070413 trehalose metabolism in response to stress IEP Predict GO terms from Neighborhoods
BP GO:0070417 cellular response to cold IEP Predict GO terms from Neighborhoods
BP GO:0072331 signal transduction by p53 class mediator IEP Predict GO terms from Neighborhoods
BP GO:0072332 intrinsic apoptotic signaling pathway by p53 class mediator IEP Predict GO terms from Neighborhoods
MF GO:0072542 protein phosphatase activator activity IEP Predict GO terms from Neighborhoods
BP GO:0080159 zygote elongation IEP Predict GO terms from Neighborhoods
BP GO:0080183 response to photooxidative stress IEP Predict GO terms from Neighborhoods
BP GO:0090219 negative regulation of lipid kinase activity IEP Predict GO terms from Neighborhoods
BP GO:0090342 obsolete regulation of cell aging IEP Predict GO terms from Neighborhoods
BP GO:0097190 apoptotic signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0097193 intrinsic apoptotic signaling pathway IEP Predict GO terms from Neighborhoods
CC GO:0098552 side of membrane IEP Predict GO terms from Neighborhoods
CC GO:0098562 cytoplasmic side of membrane IEP Predict GO terms from Neighborhoods
CC GO:0098687 chromosomal region IEP Predict GO terms from Neighborhoods
MF GO:0102986 trehalose synthase activity IEP Predict GO terms from Neighborhoods
MF GO:0140030 modification-dependent protein binding IEP Predict GO terms from Neighborhoods
MF GO:0140034 methylation-dependent protein binding IEP Predict GO terms from Neighborhoods
BP GO:1900055 regulation of leaf senescence IEP Predict GO terms from Neighborhoods
BP GO:1900056 negative regulation of leaf senescence IEP Predict GO terms from Neighborhoods
BP GO:1900109 regulation of histone H3-K9 dimethylation IEP Predict GO terms from Neighborhoods
BP GO:1900111 positive regulation of histone H3-K9 dimethylation IEP Predict GO terms from Neighborhoods
BP GO:1900457 regulation of brassinosteroid mediated signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:1900458 negative regulation of brassinosteroid mediated signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:1900459 positive regulation of brassinosteroid mediated signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:1901002 positive regulation of response to salt stress IEP Predict GO terms from Neighborhoods
BP GO:1901988 negative regulation of cell cycle phase transition IEP Predict GO terms from Neighborhoods
BP GO:1901990 regulation of mitotic cell cycle phase transition IEP Predict GO terms from Neighborhoods
BP GO:1901991 negative regulation of mitotic cell cycle phase transition IEP Predict GO terms from Neighborhoods
BP GO:1902806 regulation of cell cycle G1/S phase transition IEP Predict GO terms from Neighborhoods
BP GO:1902807 negative regulation of cell cycle G1/S phase transition IEP Predict GO terms from Neighborhoods
BP GO:1903046 meiotic cell cycle process IEP Predict GO terms from Neighborhoods
BP GO:1903076 regulation of protein localization to plasma membrane IEP Predict GO terms from Neighborhoods
BP GO:1903077 negative regulation of protein localization to plasma membrane IEP Predict GO terms from Neighborhoods
CC GO:1903293 phosphatase complex IEP Predict GO terms from Neighborhoods
BP GO:1903828 negative regulation of protein localization IEP Predict GO terms from Neighborhoods
BP GO:1904375 regulation of protein localization to cell periphery IEP Predict GO terms from Neighborhoods
BP GO:1904376 negative regulation of protein localization to cell periphery IEP Predict GO terms from Neighborhoods
BP GO:1905475 regulation of protein localization to membrane IEP Predict GO terms from Neighborhoods
BP GO:1905476 negative regulation of protein localization to membrane IEP Predict GO terms from Neighborhoods
BP GO:2000031 regulation of salicylic acid mediated signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:2000045 regulation of G1/S transition of mitotic cell cycle IEP Predict GO terms from Neighborhoods
BP GO:2000134 negative regulation of G1/S transition of mitotic cell cycle IEP Predict GO terms from Neighborhoods
BP GO:2000377 regulation of reactive oxygen species metabolic process IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR001680 WD40_repeat 171 205
IPR001680 WD40_repeat 270 298
IPR001810 F-box_dom 82 127
IPR036322 WD40_repeat_dom_sf 169 490
IPR036047 F-box-like_dom_sf 73 157
No external refs found!