SOLTUB.AGRIA.G00000039254

Description : Homeodomain-like superfamily protein

Gene families : OG_02_0001424 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000039254
Cluster	HCCA Clusters (HRR 50 & PCC 0.5): Cluster_101

Type	GO Term	Name	Evidence	Source
MF	GO:0000156	phosphorelay response regulator activity	IEA	AHRD
BP	GO:0000160	phosphorelay signal transduction system	IEA	AHRD
MF	GO:0000976	transcription cis-regulatory region binding	IEA	AHRD
MF	GO:0001067	transcription regulatory region nucleic acid binding	None	Extended
BP	GO:0001101	response to acid chemical	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	AHRD
MF	GO:0003690	double-stranded DNA binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	AHRD
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	AHRD
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IEA	AHRD
CC	GO:0005829	cytosol	IEA	AHRD
BP	GO:0006355	regulation of DNA-templated transcription	IEA	AHRD
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006996	organelle organization	None	Extended
BP	GO:0007165	signal transduction	IEA	AHRD
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009414	response to water deprivation	IEA	AHRD
BP	GO:0009415	response to water	None	Extended
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009657	plastid organization	None	Extended
BP	GO:0009658	chloroplast organization	IEA	AHRD
BP	GO:0009719	response to endogenous stimulus	None	Extended
BP	GO:0009723	response to ethylene	IEA	AHRD
BP	GO:0009725	response to hormone	None	Extended
BP	GO:0009735	response to cytokinin	IEA	AHRD
BP	GO:0009736	cytokinin-activated signaling pathway	IEA	AHRD
BP	GO:0009755	hormone-mediated signaling pathway	None	Extended
BP	GO:0009873	ethylene-activated signaling pathway	IEA	AHRD
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0009891	positive regulation of biosynthetic process	None	Extended
BP	GO:0009893	positive regulation of metabolic process	None	Extended
BP	GO:0009909	regulation of flower development	None	Extended
BP	GO:0009910	negative regulation of flower development	IEA	AHRD
BP	GO:0009966	regulation of signal transduction	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010014	meristem initiation	None	Extended
BP	GO:0010033	response to organic substance	None	Extended
BP	GO:0010035	response to inorganic substance	None	Extended
BP	GO:0010074	maintenance of meristem identity	None	Extended
BP	GO:0010075	regulation of meristem growth	None	Extended
BP	GO:0010082	regulation of root meristem growth	IEA	AHRD
BP	GO:0010119	regulation of stomatal movement	IEA	AHRD
BP	GO:0010150	leaf senescence	IEA	AHRD
BP	GO:0010380	regulation of chlorophyll biosynthetic process	IEA	AHRD
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010492	maintenance of shoot apical meristem identity	IEA	AHRD
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0010557	positive regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0010604	positive regulation of macromolecule metabolic process	None	Extended
BP	GO:0010638	positive regulation of organelle organization	IEA	AHRD
BP	GO:0010646	regulation of cell communication	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0019827	stem cell population maintenance	None	Extended
BP	GO:0023051	regulation of signaling	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031325	positive regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0031328	positive regulation of cellular biosynthetic process	None	Extended
BP	GO:0031537	regulation of anthocyanin metabolic process	IEA	AHRD
BP	GO:0032501	multicellular organismal process	None	Extended
BP	GO:0032502	developmental process	None	Extended
BP	GO:0032870	cellular response to hormone stimulus	None	Extended
BP	GO:0033043	regulation of organelle organization	None	Extended
BP	GO:0035556	intracellular signal transduction	None	Extended
BP	GO:0040008	regulation of growth	None	Extended
BP	GO:0042221	response to chemical	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
MF	GO:0043565	sequence-specific DNA binding	None	Extended
BP	GO:0045893	positive regulation of DNA-templated transcription	IEA	AHRD
BP	GO:0045935	positive regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0048364	root development	IEA	AHRD
BP	GO:0048367	shoot system development	IEA	AHRD
BP	GO:0048511	rhythmic process	IEA	AHRD
BP	GO:0048518	positive regulation of biological process	None	Extended
BP	GO:0048519	negative regulation of biological process	None	Extended
BP	GO:0048522	positive regulation of cellular process	None	Extended
BP	GO:0048580	regulation of post-embryonic development	None	Extended
BP	GO:0048581	negative regulation of post-embryonic development	None	Extended
BP	GO:0048583	regulation of response to stimulus	None	Extended
BP	GO:0048638	regulation of developmental growth	None	Extended
BP	GO:0048731	system development	None	Extended
BP	GO:0048831	regulation of shoot system development	None	Extended
BP	GO:0048856	anatomical structure development	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050793	regulation of developmental process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051093	negative regulation of developmental process	None	Extended
BP	GO:0051128	regulation of cellular component organization	None	Extended
BP	GO:0051130	positive regulation of cellular component organization	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051173	positive regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051239	regulation of multicellular organismal process	None	Extended
BP	GO:0051241	negative regulation of multicellular organismal process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0051254	positive regulation of RNA metabolic process	None	Extended
BP	GO:0051716	cellular response to stimulus	None	Extended
MF	GO:0060089	molecular transducer activity	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0070887	cellular response to chemical stimulus	None	Extended
BP	GO:0071310	cellular response to organic substance	None	Extended
BP	GO:0071368	cellular response to cytokinin stimulus	IEA	AHRD
BP	GO:0071495	cellular response to endogenous stimulus	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
BP	GO:0080022	primary root development	IEA	AHRD
BP	GO:0080036	regulation of cytokinin-activated signaling pathway	IEA	AHRD
BP	GO:0080090	regulation of primary metabolic process	None	Extended
BP	GO:0080113	regulation of seed growth	IEA	AHRD
BP	GO:0090056	regulation of chlorophyll metabolic process	None	Extended
BP	GO:0090506	axillary shoot meristem initiation	IEA	AHRD
BP	GO:0090693	plant organ senescence	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
BP	GO:0098727	maintenance of cell number	None	Extended
BP	GO:0099402	plant organ development	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1900055	regulation of leaf senescence	None	Extended
BP	GO:1900056	negative regulation of leaf senescence	IEA	AHRD
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901401	regulation of tetrapyrrole metabolic process	None	Extended
BP	GO:1901463	regulation of tetrapyrrole biosynthetic process	None	Extended
BP	GO:1901700	response to oxygen-containing compound	None	Extended
BP	GO:1902680	positive regulation of RNA biosynthetic process	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:1903508	positive regulation of nucleic acid-templated transcription	None	Extended
BP	GO:1990110	callus formation	IEA	AHRD
MF	GO:1990837	sequence-specific double-stranded DNA binding	None	Extended
BP	GO:2000026	regulation of multicellular organismal development	None	Extended
BP	GO:2000241	regulation of reproductive process	None	Extended
BP	GO:2000242	negative regulation of reproductive process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR006447	Myb_dom_plants	377	429
IPR009057	Homeobox-like_sf	374	432

External Links

No external refs found!

SOLTUB.AGRIA.G00000039254

Expression Profile

Co-expression Networks

Functional Annotation