SOLTUB.AGRIA.G00000039325

Description : 60S ribosomal protein L39

Gene families : OG_02_0021478 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000039325
Cluster	HCCA Clusters (HRR 50 & PCC 0.5): Cluster_162

Type	GO Term	Name	Evidence	Source
BP	GO:0000245	spliceosomal complex assembly	IEA	AHRD
BP	GO:0000375	RNA splicing, via transesterification reactions	None	Extended
BP	GO:0000377	RNA splicing, via transesterification reactions with bulged adenosine as nucleophile	None	Extended
BP	GO:0000398	mRNA splicing, via spliceosome	None	Extended
BP	GO:0002181	cytoplasmic translation	IEA	AHRD
BP	GO:0002227	innate immune response in mucosa	IEA	AHRD
BP	GO:0002251	organ or tissue specific immune response	None	Extended
BP	GO:0002376	immune system process	None	Extended
BP	GO:0002385	mucosal immune response	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	AHRD
MF	GO:0003723	RNA binding	None	Extended
MF	GO:0003729	mRNA binding	IEA	AHRD
MF	GO:0003735	structural constituent of ribosome	IEA	AHRD
MF	GO:0005198	structural molecule activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	AHRD
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005615	extracellular space	IEA	AHRD
CC	GO:0005681	spliceosomal complex	None	Extended
CC	GO:0005684	U2-type spliceosomal complex	None	Extended
CC	GO:0005686	U2 snRNP	IEA	AHRD
CC	GO:0005689	U12-type spliceosomal complex	IEA	AHRD
CC	GO:0005840	ribosome	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	None	Extended
BP	GO:0006396	RNA processing	None	Extended
BP	GO:0006397	mRNA processing	None	Extended
BP	GO:0006412	translation	None	Extended
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006952	defense response	None	Extended
BP	GO:0006955	immune response	None	Extended
BP	GO:0006959	humoral immune response	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008270	zinc ion binding	IEA	AHRD
BP	GO:0008380	RNA splicing	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009410	response to xenobiotic stimulus	IEA	AHRD
BP	GO:0009605	response to external stimulus	None	Extended
BP	GO:0009607	response to biotic stimulus	None	Extended
BP	GO:0009617	response to bacterium	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0009891	positive regulation of biosynthetic process	None	Extended
BP	GO:0009893	positive regulation of metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0010557	positive regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0010604	positive regulation of macromolecule metabolic process	None	Extended
CC	GO:0015934	large ribosomal subunit	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
BP	GO:0016071	mRNA metabolic process	None	Extended
CC	GO:0016363	nuclear matrix	IEA	AHRD
CC	GO:0016604	nuclear body	None	Extended
CC	GO:0016607	nuclear speck	IEA	AHRD
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0019730	antimicrobial humoral response	None	Extended
BP	GO:0019731	antibacterial humoral response	IEA	AHRD
BP	GO:0022607	cellular component assembly	None	Extended
BP	GO:0022618	ribonucleoprotein complex assembly	None	Extended
CC	GO:0022625	cytosolic large ribosomal subunit	IEA	AHRD
BP	GO:0030154	cell differentiation	None	Extended
CC	GO:0030532	small nuclear ribonucleoprotein complex	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031325	positive regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0031328	positive regulation of cellular biosynthetic process	None	Extended
BP	GO:0032502	developmental process	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0042221	response to chemical	None	Extended
BP	GO:0042742	defense response to bacterium	None	Extended
CC	GO:0042788	polysomal ribosome	IEA	AHRD
BP	GO:0043043	peptide biosynthetic process	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043207	response to external biotic stimulus	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	cellular amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0043933	protein-containing complex organization	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
CC	GO:0044391	ribosomal subunit	None	Extended
BP	GO:0044419	biological process involved in interspecies interaction between organisms	None	Extended
BP	GO:0045087	innate immune response	None	Extended
BP	GO:0045292	mRNA cis splicing, via spliceosome	IEA	AHRD
BP	GO:0045893	positive regulation of DNA-templated transcription	IEA	AHRD
BP	GO:0045935	positive regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended
BP	GO:0048518	positive regulation of biological process	None	Extended
BP	GO:0048522	positive regulation of cellular process	None	Extended
BP	GO:0048863	stem cell differentiation	IEA	AHRD
BP	GO:0048869	cellular developmental process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050830	defense response to Gram-positive bacterium	IEA	AHRD
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051173	positive regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0051254	positive regulation of RNA metabolic process	None	Extended
BP	GO:0051707	response to other organism	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0061844	antimicrobial humoral immune response mediated by antimicrobial peptide	IEA	AHRD
BP	GO:0065003	protein-containing complex assembly	None	Extended
BP	GO:0065007	biological regulation	None	Extended
CC	GO:0071005	U2-type precatalytic spliceosome	IEA	AHRD
CC	GO:0071011	precatalytic spliceosome	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0071826	ribonucleoprotein complex subunit organization	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0097525	spliceosomal snRNP complex	None	Extended
BP	GO:0098542	defense response to other organism	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
CC	GO:0120114	Sm-like protein family complex	None	Extended
CC	GO:0140513	nuclear protein-containing complex	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
BP	GO:1902680	positive regulation of RNA biosynthetic process	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:1903508	positive regulation of nucleic acid-templated transcription	None	Extended
CC	GO:1990904	ribonucleoprotein complex	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0000154	rRNA modification	IEP	Predict GO terms from Neighborhoods
BP	GO:0000244	spliceosomal tri-snRNP complex assembly	IEP	Predict GO terms from Neighborhoods
CC	GO:0000347	THO complex	IEP	Predict GO terms from Neighborhoods
BP	GO:0000387	spliceosomal snRNP assembly	IEP	Predict GO terms from Neighborhoods
CC	GO:0000418	RNA polymerase IV complex	IEP	Predict GO terms from Neighborhoods
CC	GO:0000419	RNA polymerase V complex	IEP	Predict GO terms from Neighborhoods
CC	GO:0000428	DNA-directed RNA polymerase complex	IEP	Predict GO terms from Neighborhoods
CC	GO:0000445	THO complex part of transcription export complex	IEP	Predict GO terms from Neighborhoods
BP	GO:0000448	cleavage in ITS2 between 5.8S rRNA and LSU-rRNA of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)	IEP	Predict GO terms from Neighborhoods
BP	GO:0000454	snoRNA guided rRNA pseudouridine synthesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0000469	cleavage involved in rRNA processing	IEP	Predict GO terms from Neighborhoods
BP	GO:0000478	endonucleolytic cleavage involved in rRNA processing	IEP	Predict GO terms from Neighborhoods
BP	GO:0000479	endonucleolytic cleavage of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)	IEP	Predict GO terms from Neighborhoods
BP	GO:0000741	karyogamy	IEP	Predict GO terms from Neighborhoods
BP	GO:0001192	maintenance of transcriptional fidelity during transcription elongation	IEP	Predict GO terms from Neighborhoods
BP	GO:0001193	maintenance of transcriptional fidelity during transcription elongation by RNA polymerase II	IEP	Predict GO terms from Neighborhoods
MF	GO:0001221	transcription coregulator binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0001223	transcription coactivator binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0001522	pseudouridine synthesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0001906	cell killing	IEP	Predict GO terms from Neighborhoods
BP	GO:0002182	cytoplasmic translational elongation	IEP	Predict GO terms from Neighborhoods
MF	GO:0003899	DNA-directed 5'-3' RNA polymerase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0003968	RNA-directed 5'-3' RNA polymerase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004857	enzyme inhibitor activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0005539	glycosaminoglycan binding	IEP	Predict GO terms from Neighborhoods
CC	GO:0005665	RNA polymerase II, core complex	IEP	Predict GO terms from Neighborhoods
CC	GO:0005688	U6 snRNP	IEP	Predict GO terms from Neighborhoods
CC	GO:0005730	nucleolus	IEP	Predict GO terms from Neighborhoods
CC	GO:0005732	sno(s)RNA-containing ribonucleoprotein complex	IEP	Predict GO terms from Neighborhoods
BP	GO:0006278	RNA-templated DNA biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006283	transcription-coupled nucleotide-excision repair	IEP	Predict GO terms from Neighborhoods
BP	GO:0006346	DNA methylation-dependent heterochromatin formation	IEP	Predict GO terms from Neighborhoods
BP	GO:0006352	DNA-templated transcription initiation	IEP	Predict GO terms from Neighborhoods
BP	GO:0006364	rRNA processing	IEP	Predict GO terms from Neighborhoods
BP	GO:0006367	transcription initiation at RNA polymerase II promoter	IEP	Predict GO terms from Neighborhoods
BP	GO:0006379	mRNA cleavage	IEP	Predict GO terms from Neighborhoods
BP	GO:0006406	mRNA export from nucleus	IEP	Predict GO terms from Neighborhoods
BP	GO:0006414	translational elongation	IEP	Predict GO terms from Neighborhoods
BP	GO:0006417	regulation of translation	IEP	Predict GO terms from Neighborhoods
BP	GO:0006448	regulation of translational elongation	IEP	Predict GO terms from Neighborhoods
BP	GO:0007004	telomere maintenance via telomerase	IEP	Predict GO terms from Neighborhoods
BP	GO:0007566	embryo implantation	IEP	Predict GO terms from Neighborhoods
MF	GO:0008201	heparin binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0009967	positive regulation of signal transduction	IEP	Predict GO terms from Neighborhoods
BP	GO:0010197	polar nucleus fusion	IEP	Predict GO terms from Neighborhoods
BP	GO:0010267	ta-siRNA processing	IEP	Predict GO terms from Neighborhoods
BP	GO:0010628	positive regulation of gene expression	IEP	Predict GO terms from Neighborhoods
BP	GO:0010647	positive regulation of cell communication	IEP	Predict GO terms from Neighborhoods
BP	GO:0010833	telomere maintenance via telomere lengthening	IEP	Predict GO terms from Neighborhoods
CC	GO:0014069	postsynaptic density	IEP	Predict GO terms from Neighborhoods
MF	GO:0015175	neutral amino acid transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0015186	L-glutamine transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0016072	rRNA metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0016073	snRNA metabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0017069	snRNA binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0017070	U6 snRNA binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0017085	response to insecticide	IEP	Predict GO terms from Neighborhoods
MF	GO:0019838	growth factor binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0019843	rRNA binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0022613	ribonucleoprotein complex biogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0023056	positive regulation of signaling	IEP	Predict GO terms from Neighborhoods
CC	GO:0030054	cell junction	IEP	Predict GO terms from Neighborhoods
MF	GO:0030234	enzyme regulator activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0030422	siRNA processing	IEP	Predict GO terms from Neighborhoods
MF	GO:0030515	snoRNA binding	IEP	Predict GO terms from Neighborhoods
CC	GO:0030684	preribosome	IEP	Predict GO terms from Neighborhoods
CC	GO:0030687	preribosome, large subunit precursor	IEP	Predict GO terms from Neighborhoods
BP	GO:0031048	small non-coding RNA-dependent heterochromatin formation	IEP	Predict GO terms from Neighborhoods
BP	GO:0031100	animal organ regeneration	IEP	Predict GO terms from Neighborhoods
BP	GO:0031118	rRNA pseudouridine synthesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0031120	snRNA pseudouridine synthesis	IEP	Predict GO terms from Neighborhoods
MF	GO:0031386	protein tag	IEP	Predict GO terms from Neighborhoods
BP	GO:0031397	negative regulation of protein ubiquitination	IEP	Predict GO terms from Neighborhoods
CC	GO:0031429	box H/ACA snoRNP complex	IEP	Predict GO terms from Neighborhoods
BP	GO:0031589	cell-substrate adhesion	IEP	Predict GO terms from Neighborhoods
MF	GO:0031625	ubiquitin protein ligase binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0031640	killing of cells of another organism	IEP	Predict GO terms from Neighborhoods
BP	GO:0032526	response to retinoic acid	IEP	Predict GO terms from Neighborhoods
BP	GO:0032973	amino acid export across plasma membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0032986	protein-DNA complex disassembly	IEP	Predict GO terms from Neighborhoods
MF	GO:0034062	5'-3' RNA polymerase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0034248	regulation of cellular amide metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0034250	positive regulation of cellular amide metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0034470	ncRNA processing	IEP	Predict GO terms from Neighborhoods
MF	GO:0034513	box H/ACA snoRNA binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0034639	L-amino acid efflux transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0034660	ncRNA metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0035162	embryonic hemopoiesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0035264	multicellular organism growth	IEP	Predict GO terms from Neighborhoods
MF	GO:0035368	selenocysteine insertion sequence binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0040031	snRNA modification	IEP	Predict GO terms from Neighborhoods
BP	GO:0042273	ribosomal large subunit biogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0043090	amino acid import	IEP	Predict GO terms from Neighborhoods
MF	GO:0044389	ubiquitin-like protein ligase binding	IEP	Predict GO terms from Neighborhoods
CC	GO:0045202	synapse	IEP	Predict GO terms from Neighborhoods
BP	GO:0045727	positive regulation of translation	IEP	Predict GO terms from Neighborhoods
BP	GO:0045901	positive regulation of translational elongation	IEP	Predict GO terms from Neighborhoods
CC	GO:0046540	U4/U6 x U5 tri-snRNP complex	IEP	Predict GO terms from Neighborhoods
BP	GO:0046677	response to antibiotic	IEP	Predict GO terms from Neighborhoods
BP	GO:0046898	response to cycloheximide	IEP	Predict GO terms from Neighborhoods
BP	GO:0048568	embryonic organ development	IEP	Predict GO terms from Neighborhoods
BP	GO:0051291	protein heterooligomerization	IEP	Predict GO terms from Neighborhoods
BP	GO:0051438	regulation of ubiquitin-protein transferase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0051444	negative regulation of ubiquitin-protein transferase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0051591	response to cAMP	IEP	Predict GO terms from Neighborhoods
CC	GO:0055029	nuclear DNA-directed RNA polymerase complex	IEP	Predict GO terms from Neighborhoods
MF	GO:0055105	ubiquitin-protein transferase inhibitor activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0055106	ubiquitin-protein transferase regulator activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0060215	primitive hemopoiesis	IEP	Predict GO terms from Neighborhoods
MF	GO:0070034	telomerase RNA binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0070180	large ribosomal subunit rRNA binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0071236	cellular response to antibiotic	IEP	Predict GO terms from Neighborhoods
BP	GO:0071320	cellular response to cAMP	IEP	Predict GO terms from Neighborhoods
BP	GO:0071417	cellular response to organonitrogen compound	IEP	Predict GO terms from Neighborhoods
CC	GO:0072588	box H/ACA RNP complex	IEP	Predict GO terms from Neighborhoods
CC	GO:0072589	box H/ACA scaRNP complex	IEP	Predict GO terms from Neighborhoods
BP	GO:0072716	response to actinomycin D	IEP	Predict GO terms from Neighborhoods
BP	GO:0072717	cellular response to actinomycin D	IEP	Predict GO terms from Neighborhoods
BP	GO:0080144	amino acid homeostasis	IEP	Predict GO terms from Neighborhoods
BP	GO:0080188	gene silencing by RNA-directed DNA methylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0090305	nucleic acid phosphodiester bond hydrolysis	IEP	Predict GO terms from Neighborhoods
BP	GO:0090501	RNA phosphodiester bond hydrolysis	IEP	Predict GO terms from Neighborhoods
BP	GO:0090502	RNA phosphodiester bond hydrolysis, endonucleolytic	IEP	Predict GO terms from Neighborhoods
CC	GO:0090661	box H/ACA telomerase RNP complex	IEP	Predict GO terms from Neighborhoods
MF	GO:0097371	MDM2/MDM4 family protein binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0097421	liver regeneration	IEP	Predict GO terms from Neighborhoods
CC	GO:0097526	spliceosomal tri-snRNP complex	IEP	Predict GO terms from Neighborhoods
MF	GO:0097747	RNA polymerase activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0098552	side of membrane	IEP	Predict GO terms from Neighborhoods
CC	GO:0098554	cytoplasmic side of endoplasmic reticulum membrane	IEP	Predict GO terms from Neighborhoods
CC	GO:0098556	cytoplasmic side of rough endoplasmic reticulum membrane	IEP	Predict GO terms from Neighborhoods
CC	GO:0098562	cytoplasmic side of membrane	IEP	Predict GO terms from Neighborhoods
MF	GO:0098772	molecular function regulator activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0099572	postsynaptic specialization	IEP	Predict GO terms from Neighborhoods
CC	GO:0120115	Lsm2-8 complex	IEP	Predict GO terms from Neighborhoods
BP	GO:0140718	facultative heterochromatin formation	IEP	Predict GO terms from Neighborhoods
BP	GO:1901699	cellular response to nitrogen compound	IEP	Predict GO terms from Neighborhoods
BP	GO:1901796	regulation of signal transduction by p53 class mediator	IEP	Predict GO terms from Neighborhoods
BP	GO:1901798	positive regulation of signal transduction by p53 class mediator	IEP	Predict GO terms from Neighborhoods
BP	GO:1902531	regulation of intracellular signal transduction	IEP	Predict GO terms from Neighborhoods
BP	GO:1902533	positive regulation of intracellular signal transduction	IEP	Predict GO terms from Neighborhoods
BP	GO:1903051	negative regulation of proteolysis involved in protein catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1903321	negative regulation of protein modification by small protein conjugation or removal	IEP	Predict GO terms from Neighborhoods
BP	GO:1904400	response to Thyroid stimulating hormone	IEP	Predict GO terms from Neighborhoods
BP	GO:1904401	cellular response to Thyroid stimulating hormone	IEP	Predict GO terms from Neighborhoods
BP	GO:1904569	regulation of selenocysteine incorporation	IEP	Predict GO terms from Neighborhoods
BP	GO:1904571	positive regulation of selenocysteine incorporation	IEP	Predict GO terms from Neighborhoods
BP	GO:1904587	response to glycoprotein	IEP	Predict GO terms from Neighborhoods
BP	GO:1904588	cellular response to glycoprotein	IEP	Predict GO terms from Neighborhoods
BP	GO:1904666	regulation of ubiquitin protein ligase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:1904667	negative regulation of ubiquitin protein ligase activity	IEP	Predict GO terms from Neighborhoods
CC	GO:1990726	Lsm1-7-Pat1 complex	IEP	Predict GO terms from Neighborhoods
MF	GO:1990948	ubiquitin ligase inhibitor activity	IEP	Predict GO terms from Neighborhoods
BP	GO:2000059	negative regulation of ubiquitin-dependent protein catabolic process	IEP	Predict GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR005345	PHF5	1	104
IPR023626	Ribosomal_L39e_dom_sf	125	172
IPR000077	Ribosomal_L39	131	171

External Links

No external refs found!

SOLTUB.AGRIA.G00000039325

Expression Profile

Co-expression Networks

Functional Annotation