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Description : LOB domain-containing protein, putative
Gene families : OG_02_0007695 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000003931 | |
| Cluster | HCCA Clusters (HRR 50 & PCC 0.5): Cluster_149 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000976 | transcription cis-regulatory region binding | IEA | AHRD |
| MF | GO:0001067 | transcription regulatory region nucleic acid binding | None | Extended |
| BP | GO:0002831 | regulation of response to biotic stimulus | None | Extended |
| BP | GO:0003002 | regionalization | None | Extended |
| BP | GO:0003006 | developmental process involved in reproduction | None | Extended |
| MF | GO:0003674 | molecular_function | None | Extended |
| MF | GO:0003676 | nucleic acid binding | None | Extended |
| MF | GO:0003677 | DNA binding | None | Extended |
| MF | GO:0003682 | chromatin binding | None | Extended |
| MF | GO:0003690 | double-stranded DNA binding | None | Extended |
| MF | GO:0005488 | binding | None | Extended |
| MF | GO:0005515 | protein binding | None | Extended |
| CC | GO:0005575 | cellular_component | None | Extended |
| CC | GO:0005654 | nucleoplasm | IEA | AHRD |
| CC | GO:0005739 | mitochondrion | IEA | AHRD |
| BP | GO:0006355 | regulation of DNA-templated transcription | None | Extended |
| BP | GO:0007165 | signal transduction | None | Extended |
| BP | GO:0007389 | pattern specification process | None | Extended |
| BP | GO:0008150 | biological_process | None | Extended |
| BP | GO:0009653 | anatomical structure morphogenesis | None | Extended |
| BP | GO:0009755 | hormone-mediated signaling pathway | None | Extended |
| BP | GO:0009791 | post-embryonic development | None | Extended |
| BP | GO:0009799 | specification of symmetry | IEA | AHRD |
| BP | GO:0009867 | jasmonic acid mediated signaling pathway | IEA | AHRD |
| BP | GO:0009888 | tissue development | None | Extended |
| BP | GO:0009889 | regulation of biosynthetic process | None | Extended |
| BP | GO:0009891 | positive regulation of biosynthetic process | None | Extended |
| BP | GO:0009893 | positive regulation of metabolic process | None | Extended |
| BP | GO:0009944 | polarity specification of adaxial/abaxial axis | IEA | AHRD |
| BP | GO:0009954 | proximal/distal pattern formation | IEA | AHRD |
| BP | GO:0009965 | leaf morphogenesis | IEA | AHRD |
| BP | GO:0009987 | cellular process | None | Extended |
| BP | GO:0010087 | phloem or xylem histogenesis | None | Extended |
| BP | GO:0010089 | xylem development | IEA | AHRD |
| BP | GO:0010199 | organ boundary specification between lateral organs and the meristem | IEA | AHRD |
| BP | GO:0010311 | lateral root formation | IEA | AHRD |
| BP | GO:0010468 | regulation of gene expression | None | Extended |
| BP | GO:0010556 | regulation of macromolecule biosynthetic process | None | Extended |
| BP | GO:0010557 | positive regulation of macromolecule biosynthetic process | None | Extended |
| BP | GO:0010604 | positive regulation of macromolecule metabolic process | None | Extended |
| BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | None | Extended |
| BP | GO:0019222 | regulation of metabolic process | None | Extended |
| BP | GO:0022414 | reproductive process | None | Extended |
| BP | GO:0031323 | regulation of cellular metabolic process | None | Extended |
| BP | GO:0031325 | positive regulation of cellular metabolic process | None | Extended |
| BP | GO:0031326 | regulation of cellular biosynthetic process | None | Extended |
| BP | GO:0031328 | positive regulation of cellular biosynthetic process | None | Extended |
| BP | GO:0031347 | regulation of defense response | None | Extended |
| BP | GO:0032101 | regulation of response to external stimulus | None | Extended |
| BP | GO:0032501 | multicellular organismal process | None | Extended |
| BP | GO:0032502 | developmental process | None | Extended |
| MF | GO:0042802 | identical protein binding | None | Extended |
| MF | GO:0042803 | protein homodimerization activity | IEA | AHRD |
| CC | GO:0043226 | organelle | None | Extended |
| CC | GO:0043227 | membrane-bounded organelle | None | Extended |
| CC | GO:0043229 | intracellular organelle | None | Extended |
| CC | GO:0043231 | intracellular membrane-bounded organelle | None | Extended |
| MF | GO:0043565 | sequence-specific DNA binding | None | Extended |
| BP | GO:0045893 | positive regulation of DNA-templated transcription | IEA | AHRD |
| BP | GO:0045935 | positive regulation of nucleobase-containing compound metabolic process | None | Extended |
| MF | GO:0046983 | protein dimerization activity | None | Extended |
| BP | GO:0048364 | root development | None | Extended |
| BP | GO:0048437 | floral organ development | None | Extended |
| BP | GO:0048441 | petal development | IEA | AHRD |
| BP | GO:0048518 | positive regulation of biological process | None | Extended |
| BP | GO:0048522 | positive regulation of cellular process | None | Extended |
| BP | GO:0048583 | regulation of response to stimulus | None | Extended |
| BP | GO:0048646 | anatomical structure formation involved in morphogenesis | None | Extended |
| BP | GO:0048827 | phyllome development | None | Extended |
| BP | GO:0048830 | adventitious root development | IEA | AHRD |
| BP | GO:0048856 | anatomical structure development | None | Extended |
| BP | GO:0048859 | formation of anatomical boundary | None | Extended |
| BP | GO:0050789 | regulation of biological process | None | Extended |
| BP | GO:0050794 | regulation of cellular process | None | Extended |
| BP | GO:0051171 | regulation of nitrogen compound metabolic process | None | Extended |
| BP | GO:0051173 | positive regulation of nitrogen compound metabolic process | None | Extended |
| BP | GO:0051252 | regulation of RNA metabolic process | None | Extended |
| BP | GO:0051254 | positive regulation of RNA metabolic process | None | Extended |
| BP | GO:0060255 | regulation of macromolecule metabolic process | None | Extended |
| BP | GO:0065001 | specification of axis polarity | None | Extended |
| BP | GO:0065007 | biological regulation | None | Extended |
| BP | GO:0080090 | regulation of primary metabolic process | None | Extended |
| BP | GO:0080134 | regulation of response to stress | None | Extended |
| BP | GO:0090691 | formation of plant organ boundary | None | Extended |
| MF | GO:0097159 | organic cyclic compound binding | None | Extended |
| BP | GO:0099402 | plant organ development | None | Extended |
| CC | GO:0110165 | cellular anatomical entity | None | Extended |
| BP | GO:1900150 | regulation of defense response to fungus | IEA | AHRD |
| MF | GO:1901363 | heterocyclic compound binding | None | Extended |
| BP | GO:1902680 | positive regulation of RNA biosynthetic process | None | Extended |
| BP | GO:1903506 | regulation of nucleic acid-templated transcription | None | Extended |
| BP | GO:1903508 | positive regulation of nucleic acid-templated transcription | None | Extended |
| BP | GO:1905392 | plant organ morphogenesis | None | Extended |
| BP | GO:1905393 | plant organ formation | None | Extended |
| BP | GO:1990110 | callus formation | IEA | AHRD |
| MF | GO:1990837 | sequence-specific double-stranded DNA binding | None | Extended |
| MF | GO:1990841 | promoter-specific chromatin binding | IEA | AHRD |
| BP | GO:2001141 | regulation of RNA biosynthetic process | None | Extended |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0002221 | pattern recognition receptor signaling pathway | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0002237 | response to molecule of bacterial origin | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0002764 | immune response-regulating signaling pathway | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0003333 | amino acid transmembrane transport | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0004713 | protein tyrosine kinase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0005342 | organic acid transmembrane transporter activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0005516 | calmodulin binding | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0005938 | cell cortex | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006521 | regulation of cellular amino acid metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006835 | dicarboxylic acid transport | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006865 | amino acid transport | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0007166 | cell surface receptor signaling pathway | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0008509 | anion transmembrane transporter activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0008514 | organic anion transmembrane transporter activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009593 | detection of chemical stimulus | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009595 | detection of biotic stimulus | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0009705 | plant-type vacuole membrane | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009832 | plant-type cell wall biogenesis | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009834 | plant-type secondary cell wall biogenesis | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009914 | hormone transport | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010315 | auxin export across the plasma membrane | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010928 | regulation of auxin mediated signaling pathway | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0015171 | amino acid transmembrane transporter activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0015175 | neutral amino acid transmembrane transporter activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0015179 | L-amino acid transmembrane transporter activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0015186 | L-glutamine transmembrane transporter activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0015562 | efflux transmembrane transporter activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0015711 | organic anion transport | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0015800 | acidic amino acid transport | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0015807 | L-amino acid transport | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0015813 | L-glutamate transmembrane transport | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0015849 | organic acid transport | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0031625 | ubiquitin protein ligase binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0031663 | lipopolysaccharide-mediated signaling pathway | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0032350 | regulation of hormone metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0032352 | positive regulation of hormone metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0032490 | detection of molecule of bacterial origin | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0032496 | response to lipopolysaccharide | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0032497 | detection of lipopolysaccharide | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0032973 | amino acid export across plasma membrane | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0033238 | regulation of cellular amine metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0033240 | positive regulation of cellular amine metabolic process | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0034639 | L-amino acid efflux transmembrane transporter activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0038187 | pattern recognition receptor activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0042546 | cell wall biogenesis | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0044389 | ubiquitin-like protein ligase binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0045764 | positive regulation of cellular amino acid metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0046942 | carboxylic acid transport | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0046943 | carboxylic acid transmembrane transporter activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0048316 | seed development | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051606 | detection of stimulus | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051938 | L-glutamate import | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0060918 | auxin transport | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0062013 | positive regulation of small molecule metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0080144 | amino acid homeostasis | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0089718 | amino acid import across plasma membrane | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0090354 | regulation of auxin metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0090355 | positive regulation of auxin metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0090357 | regulation of tryptophan metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0090358 | positive regulation of tryptophan metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0098581 | detection of external biotic stimulus | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0098656 | anion transmembrane transport | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0098657 | import into cell | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0098712 | L-glutamate import across plasma membrane | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0098739 | import across plasma membrane | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0140115 | export across plasma membrane | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0140352 | export from cell | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1902475 | L-alpha-amino acid transmembrane transport | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1903825 | organic acid transmembrane transport | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1905039 | carboxylic acid transmembrane transport | IEP | Predict GO terms from Neighborhoods |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR004883 | LOB | 36 | 134 |
| No external refs found! |
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