SOLTUB.AGRIA.G00000039517

Description : Charged multivesicular body protein

Gene families : OG_02_0005159 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000039517
Cluster	HCCA Clusters (HRR 50 & PCC 0.5): Cluster_158

Type	GO Term	Name	Evidence	Source
CC	GO:0000323	lytic vacuole	None	Extended
CC	GO:0000785	chromatin	IEA	AHRD
CC	GO:0000815	ESCRT III complex	IEA	AHRD
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
MF	GO:0005543	phospholipid binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005635	nuclear envelope	IEA	AHRD
CC	GO:0005764	lysosome	IEA	AHRD
CC	GO:0005768	endosome	None	Extended
CC	GO:0005770	late endosome	None	Extended
CC	GO:0005771	multivesicular body	IEA	AHRD
CC	GO:0005773	vacuole	None	Extended
CC	GO:0005829	cytosol	IEA	AHRD
CC	GO:0005886	plasma membrane	IEA	AHRD
BP	GO:0006810	transport	None	Extended
BP	GO:0006811	ion transport	None	Extended
BP	GO:0006820	anion transport	None	Extended
BP	GO:0006862	nucleotide transport	None	Extended
BP	GO:0006886	intracellular protein transport	None	Extended
BP	GO:0006900	vesicle budding from membrane	None	Extended
BP	GO:0006906	vesicle fusion	None	Extended
BP	GO:0006914	autophagy	None	Extended
BP	GO:0006996	organelle organization	None	Extended
BP	GO:0007032	endosome organization	None	Extended
BP	GO:0007034	vacuolar transport	None	Extended
BP	GO:0007080	mitotic metaphase plate congression	IEA	AHRD
BP	GO:0008104	protein localization	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008289	lipid binding	None	Extended
BP	GO:0009056	catabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
CC	GO:0010008	endosome membrane	None	Extended
BP	GO:0010324	membrane invagination	IEA	AHRD
BP	GO:0010458	exit from mitosis	IEA	AHRD
BP	GO:0010564	regulation of cell cycle process	None	Extended
BP	GO:0010824	regulation of centrosome duplication	IEA	AHRD
BP	GO:0010941	regulation of cell death	None	Extended
BP	GO:0010948	negative regulation of cell cycle process	None	Extended
CC	GO:0012506	vesicle membrane	None	Extended
BP	GO:0015031	protein transport	None	Extended
BP	GO:0015711	organic anion transport	None	Extended
BP	GO:0015748	organophosphate ester transport	None	Extended
BP	GO:0015865	purine nucleotide transport	None	Extended
BP	GO:0015867	ATP transport	None	Extended
BP	GO:0015868	purine ribonucleotide transport	None	Extended
BP	GO:0015931	nucleobase-containing compound transport	None	Extended
CC	GO:0016020	membrane	None	Extended
BP	GO:0016032	viral process	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0016050	vesicle organization	None	Extended
BP	GO:0016192	vesicle-mediated transport	None	Extended
BP	GO:0016197	endosomal transport	None	Extended
BP	GO:0016236	macroautophagy	IEA	AHRD
BP	GO:0017157	regulation of exocytosis	None	Extended
BP	GO:0019076	viral release from host cell	None	Extended
BP	GO:0019725	cellular homeostasis	None	Extended
MF	GO:0019904	protein domain specific binding	IEA	AHRD
BP	GO:0022402	cell cycle process	None	Extended
BP	GO:0022411	cellular component disassembly	None	Extended
BP	GO:0022607	cellular component assembly	None	Extended
CC	GO:0030117	membrane coat	IEA	AHRD
CC	GO:0030659	cytoplasmic vesicle membrane	None	Extended
CC	GO:0031090	organelle membrane	None	Extended
MF	GO:0031210	phosphatidylcholine binding	IEA	AHRD
CC	GO:0031410	cytoplasmic vesicle	None	Extended
BP	GO:0031468	nuclear membrane reassembly	IEA	AHRD
CC	GO:0031902	late endosome membrane	IEA	AHRD
CC	GO:0031967	organelle envelope	None	Extended
CC	GO:0031975	envelope	None	Extended
CC	GO:0031982	vesicle	None	Extended
BP	GO:0032506	cytokinetic process	None	Extended
BP	GO:0032507	maintenance of protein location in cell	None	Extended
BP	GO:0032509	endosome transport via multivesicular body sorting pathway	None	Extended
BP	GO:0032511	late endosome to vacuole transport via multivesicular body sorting pathway	None	Extended
BP	GO:0032879	regulation of localization	None	Extended
BP	GO:0032886	regulation of microtubule-based process	None	Extended
BP	GO:0032984	protein-containing complex disassembly	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0033036	macromolecule localization	None	Extended
BP	GO:0033043	regulation of organelle organization	None	Extended
BP	GO:0033365	protein localization to organelle	None	Extended
BP	GO:0035891	exit from host cell	None	Extended
BP	GO:0036257	multivesicular body organization	None	Extended
BP	GO:0036258	multivesicular body assembly	IEA	AHRD
CC	GO:0036452	ESCRT complex	None	Extended
BP	GO:0039702	viral budding via host ESCRT complex	IEA	AHRD
BP	GO:0042592	homeostatic process	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0043328	protein transport to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway	IEA	AHRD
BP	GO:0043933	protein-containing complex organization	None	Extended
BP	GO:0044000	movement in host	None	Extended
BP	GO:0044087	regulation of cellular component biogenesis	None	Extended
BP	GO:0044089	positive regulation of cellular component biogenesis	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044248	cellular catabolic process	None	Extended
BP	GO:0044403	biological process involved in symbiotic interaction	None	Extended
BP	GO:0044419	biological process involved in interspecies interaction between organisms	None	Extended
BP	GO:0044770	cell cycle phase transition	None	Extended
BP	GO:0044772	mitotic cell cycle phase transition	None	Extended
BP	GO:0045053	protein retention in Golgi apparatus	IEA	AHRD
BP	GO:0045184	establishment of protein localization	None	Extended
BP	GO:0045185	maintenance of protein location	None	Extended
BP	GO:0045324	late endosome to vacuole transport	None	Extended
BP	GO:0045786	negative regulation of cell cycle	None	Extended
BP	GO:0045921	positive regulation of exocytosis	None	Extended
BP	GO:0046605	regulation of centrosome cycle	None	Extended
BP	GO:0046753	non-lytic viral release	None	Extended
BP	GO:0046755	viral budding	None	Extended
BP	GO:0046761	viral budding from plasma membrane	IEA	AHRD
BP	GO:0046907	intracellular transport	None	Extended
BP	GO:0048284	organelle fusion	None	Extended
BP	GO:0048518	positive regulation of biological process	None	Extended
BP	GO:0048519	negative regulation of biological process	None	Extended
BP	GO:0048522	positive regulation of cellular process	None	Extended
BP	GO:0048523	negative regulation of cellular process	None	Extended
BP	GO:0050000	chromosome localization	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
MF	GO:0050997	quaternary ammonium group binding	None	Extended
BP	GO:0051046	regulation of secretion	None	Extended
BP	GO:0051047	positive regulation of secretion	None	Extended
BP	GO:0051049	regulation of transport	None	Extended
BP	GO:0051050	positive regulation of transport	None	Extended
BP	GO:0051128	regulation of cellular component organization	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051235	maintenance of location	None	Extended
BP	GO:0051258	protein polymerization	IEA	AHRD
BP	GO:0051259	protein complex oligomerization	None	Extended
BP	GO:0051260	protein homooligomerization	IEA	AHRD
BP	GO:0051303	establishment of chromosome localization	None	Extended
BP	GO:0051310	metaphase plate congression	None	Extended
BP	GO:0051493	regulation of cytoskeleton organization	None	Extended
BP	GO:0051503	adenine nucleotide transport	None	Extended
BP	GO:0051640	organelle localization	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0051649	establishment of localization in cell	None	Extended
BP	GO:0051651	maintenance of location in cell	None	Extended
BP	GO:0051656	establishment of organelle localization	None	Extended
BP	GO:0051701	biological process involved in interaction with host	None	Extended
BP	GO:0051726	regulation of cell cycle	None	Extended
BP	GO:0060236	regulation of mitotic spindle organization	None	Extended
BP	GO:0060249	anatomical structure homeostasis	None	Extended
BP	GO:0060548	negative regulation of cell death	IEA	AHRD
BP	GO:0060627	regulation of vesicle-mediated transport	None	Extended
BP	GO:0061024	membrane organization	None	Extended
BP	GO:0061025	membrane fusion	None	Extended
BP	GO:0061763	multivesicular body-lysosome fusion	IEA	AHRD
BP	GO:0061919	process utilizing autophagic mechanism	None	Extended
BP	GO:0061952	midbody abscission	IEA	AHRD
BP	GO:0065003	protein-containing complex assembly	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0065008	regulation of biological quality	None	Extended
BP	GO:0070050	neuron cellular homeostasis	IEA	AHRD
BP	GO:0070507	regulation of microtubule cytoskeleton organization	None	Extended
BP	GO:0070676	intralumenal vesicle formation	IEA	AHRD
BP	GO:0070727	cellular macromolecule localization	None	Extended
BP	GO:0070925	organelle assembly	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended
BP	GO:0071709	membrane assembly	None	Extended
BP	GO:0071763	nuclear membrane organization	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
BP	GO:0071985	multivesicular body sorting pathway	None	Extended
BP	GO:0072594	establishment of protein localization to organelle	None	Extended
BP	GO:0072665	protein localization to vacuole	None	Extended
BP	GO:0072666	establishment of protein localization to vacuole	None	Extended
BP	GO:0090169	regulation of spindle assembly	None	Extended
BP	GO:0090174	organelle membrane fusion	None	Extended
BP	GO:0090224	regulation of spindle organization	None	Extended
BP	GO:0097212	lysosomal membrane organization	None	Extended
CC	GO:0097708	intracellular vesicle	None	Extended
CC	GO:0098588	bounding membrane of organelle	None	Extended
CC	GO:0098796	membrane protein complex	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901264	carbohydrate derivative transport	None	Extended
BP	GO:1901673	regulation of mitotic spindle assembly	IEA	AHRD
BP	GO:1902115	regulation of organelle assembly	None	Extended
BP	GO:1902188	obsolete positive regulation of viral release from host cell	IEA	AHRD
BP	GO:1902410	mitotic cytokinetic process	None	Extended
BP	GO:1903047	mitotic cell cycle process	None	Extended
BP	GO:1903530	regulation of secretion by cell	None	Extended
BP	GO:1903532	positive regulation of secretion by cell	None	Extended
BP	GO:1903541	regulation of exosomal secretion	None	Extended
BP	GO:1903543	positive regulation of exosomal secretion	IEA	AHRD
BP	GO:1903722	regulation of centriole elongation	None	Extended
BP	GO:1903723	negative regulation of centriole elongation	IEA	AHRD
BP	GO:1904669	ATP export	IEA	AHRD
BP	GO:1904896	ESCRT complex disassembly	None	Extended
BP	GO:1904903	ESCRT III complex disassembly	IEA	AHRD

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Type	GO Term	Name	Evidence	Source
BP	GO:0002221	pattern recognition receptor signaling pathway	IEP	Predict GO terms from Neighborhoods
MF	GO:0004383	guanylate cyclase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004866	endopeptidase inhibitor activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004869	cysteine-type endopeptidase inhibitor activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0005789	endoplasmic reticulum membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0006970	response to osmotic stress	IEP	Predict GO terms from Neighborhoods
BP	GO:0009266	response to temperature stimulus	IEP	Predict GO terms from Neighborhoods
BP	GO:0009409	response to cold	IEP	Predict GO terms from Neighborhoods
BP	GO:0009631	cold acclimation	IEP	Predict GO terms from Neighborhoods
MF	GO:0009975	cyclase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0010065	primary meristem tissue development	IEP	Predict GO terms from Neighborhoods
BP	GO:0010068	protoderm histogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0010466	negative regulation of peptidase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0010769	regulation of cell morphogenesis involved in differentiation	IEP	Predict GO terms from Neighborhoods
BP	GO:0010951	negative regulation of endopeptidase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0010959	regulation of metal ion transport	IEP	Predict GO terms from Neighborhoods
CC	GO:0016324	apical plasma membrane	IEP	Predict GO terms from Neighborhoods
MF	GO:0016849	phosphorus-oxygen lyase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0022406	membrane docking	IEP	Predict GO terms from Neighborhoods
BP	GO:0030004	cellular monovalent inorganic cation homeostasis	IEP	Predict GO terms from Neighborhoods
MF	GO:0030414	peptidase inhibitor activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0031663	lipopolysaccharide-mediated signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0042631	cellular response to water deprivation	IEP	Predict GO terms from Neighborhoods
CC	GO:0043529	GET complex	IEP	Predict GO terms from Neighborhoods
BP	GO:0045861	negative regulation of proteolysis	IEP	Predict GO terms from Neighborhoods
BP	GO:0048507	meristem development	IEP	Predict GO terms from Neighborhoods
BP	GO:0048508	embryonic meristem development	IEP	Predict GO terms from Neighborhoods
BP	GO:0048767	root hair elongation	IEP	Predict GO terms from Neighborhoods
MF	GO:0050897	cobalt ion binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0051346	negative regulation of hydrolase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0051643	endoplasmic reticulum localization	IEP	Predict GO terms from Neighborhoods
BP	GO:0051924	regulation of calcium ion transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0052547	regulation of peptidase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0052548	regulation of endopeptidase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0061134	peptidase regulator activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0061135	endopeptidase regulator activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0061817	endoplasmic reticulum-plasma membrane tethering	IEP	Predict GO terms from Neighborhoods
BP	GO:0070417	cellular response to cold	IEP	Predict GO terms from Neighborhoods
BP	GO:0071229	cellular response to acid chemical	IEP	Predict GO terms from Neighborhoods
BP	GO:0071462	cellular response to water stimulus	IEP	Predict GO terms from Neighborhoods
BP	GO:0080092	regulation of pollen tube growth	IEP	Predict GO terms from Neighborhoods
BP	GO:0080147	root hair cell development	IEP	Predict GO terms from Neighborhoods
BP	GO:0090158	endoplasmic reticulum membrane organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0097272	ammonium homeostasis	IEP	Predict GO terms from Neighborhoods
BP	GO:0097275	cellular ammonium homeostasis	IEP	Predict GO terms from Neighborhoods
BP	GO:0140056	organelle localization by membrane tethering	IEP	Predict GO terms from Neighborhoods
CC	GO:0140534	endoplasmic reticulum protein-containing complex	IEP	Predict GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR005024	Snf7_fam	17	186

External Links

No external refs found!

SOLTUB.AGRIA.G00000039517

Expression Profile

Co-expression Networks

Functional Annotation