SOLTUB.AGRIA.G00000039593

Description : Leucine-rich repeat protein kinase family protein, putative

Gene families : OG_02_0011599 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000039593
Cluster	HCCA Clusters (HRR 50 & PCC 0.5): Cluster_153

Type	GO Term	Name	Evidence	Source
BP	GO:0002682	regulation of immune system process	None	Extended
BP	GO:0002684	positive regulation of immune system process	None	Extended
BP	GO:0002764	immune response-regulating signaling pathway	IEA	AHRD
BP	GO:0002831	regulation of response to biotic stimulus	None	Extended
BP	GO:0002833	positive regulation of response to biotic stimulus	IEA	AHRD
BP	GO:0003006	developmental process involved in reproduction	IEA	AHRD
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004672	protein kinase activity	None	Extended
MF	GO:0004674	protein serine/threonine kinase activity	IEA	AHRD
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	AHRD
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005768	endosome	IEA	AHRD
BP	GO:0006468	protein phosphorylation	IEA	AHRD
BP	GO:0006793	phosphorus metabolic process	None	Extended
BP	GO:0006796	phosphate-containing compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0006810	transport	IEA	AHRD
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006952	defense response	None	Extended
BP	GO:0007049	cell cycle	None	Extended
BP	GO:0007165	signal transduction	None	Extended
BP	GO:0007275	multicellular organism development	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009605	response to external stimulus	None	Extended
BP	GO:0009607	response to biotic stimulus	None	Extended
BP	GO:0009617	response to bacterium	IEA	AHRD
BP	GO:0009653	anatomical structure morphogenesis	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010033	response to organic substance	IEA	AHRD
BP	GO:0010073	meristem maintenance	IEA	AHRD
CC	GO:0016020	membrane	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
MF	GO:0016301	kinase activity	None	Extended
BP	GO:0016310	phosphorylation	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	None	Extended
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0022414	reproductive process	None	Extended
BP	GO:0030154	cell differentiation	IEA	AHRD
CC	GO:0031090	organelle membrane	IEA	AHRD
BP	GO:0031347	regulation of defense response	None	Extended
BP	GO:0031349	positive regulation of defense response	IEA	AHRD
CC	GO:0031410	cytoplasmic vesicle	None	Extended
CC	GO:0031982	vesicle	None	Extended
CC	GO:0031984	organelle subcompartment	None	Extended
BP	GO:0032101	regulation of response to external stimulus	None	Extended
BP	GO:0032103	positive regulation of response to external stimulus	IEA	AHRD
BP	GO:0032501	multicellular organismal process	None	Extended
BP	GO:0032502	developmental process	None	Extended
BP	GO:0033036	macromolecule localization	IEA	AHRD
BP	GO:0033554	cellular response to stress	IEA	AHRD
BP	GO:0036211	protein modification process	None	Extended
MF	GO:0038023	signaling receptor activity	IEA	AHRD
CC	GO:0042175	nuclear outer membrane-endoplasmic reticulum membrane network	IEA	AHRD
BP	GO:0042221	response to chemical	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043207	response to external biotic stimulus	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044419	biological process involved in interspecies interaction between organisms	None	Extended
BP	GO:0045229	external encapsulating structure organization	None	Extended
BP	GO:0048229	gametophyte development	IEA	AHRD
BP	GO:0048364	root development	IEA	AHRD
BP	GO:0048518	positive regulation of biological process	None	Extended
BP	GO:0048583	regulation of response to stimulus	None	Extended
BP	GO:0048584	positive regulation of response to stimulus	None	Extended
BP	GO:0048856	anatomical structure development	None	Extended
BP	GO:0048869	cellular developmental process	None	Extended
BP	GO:0050776	regulation of immune response	None	Extended
BP	GO:0050778	positive regulation of immune response	IEA	AHRD
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050793	regulation of developmental process	IEA	AHRD
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051321	meiotic cell cycle	IEA	AHRD
BP	GO:0051707	response to other organism	None	Extended
BP	GO:0051716	cellular response to stimulus	None	Extended
MF	GO:0060089	molecular transducer activity	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0071554	cell wall organization or biogenesis	None	Extended
BP	GO:0071555	cell wall organization	IEA	AHRD
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
CC	GO:0071944	cell periphery	IEA	AHRD
BP	GO:0080134	regulation of response to stress	None	Extended
CC	GO:0097708	intracellular vesicle	None	Extended
BP	GO:0098542	defense response to other organism	IEA	AHRD
CC	GO:0098827	endoplasmic reticulum subcompartment	IEA	AHRD
BP	GO:0099402	plant organ development	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1905392	plant organ morphogenesis	IEA	AHRD

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0000902	cell morphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0000904	cell morphogenesis involved in differentiation	IEP	Predict GO terms from Neighborhoods
MF	GO:0000976	transcription cis-regulatory region binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0001067	transcription regulatory region nucleic acid binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0002221	pattern recognition receptor signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0003013	circulatory system process	IEP	Predict GO terms from Neighborhoods
BP	GO:0003014	renal system process	IEP	Predict GO terms from Neighborhoods
BP	GO:0003018	vascular process in circulatory system	IEP	Predict GO terms from Neighborhoods
MF	GO:0003700	DNA-binding transcription factor activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0005319	lipid transporter activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0006497	protein lipidation	IEP	Predict GO terms from Neighborhoods
BP	GO:0006505	GPI anchor metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006506	GPI anchor biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006643	membrane lipid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006650	glycerophospholipid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006661	phosphatidylinositol biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006664	glycolipid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006690	icosanoid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006723	cuticle hydrocarbon biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0007588	excretion	IEP	Predict GO terms from Neighborhoods
MF	GO:0008028	monocarboxylic acid transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0008559	ABC-type xenobiotic transporter activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0008610	lipid biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0008654	phospholipid biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009058	biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009247	glycolipid biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009314	response to radiation	IEP	Predict GO terms from Neighborhoods
BP	GO:0009411	response to UV	IEP	Predict GO terms from Neighborhoods
BP	GO:0009416	response to light stimulus	IEP	Predict GO terms from Neighborhoods
BP	GO:0009628	response to abiotic stimulus	IEP	Predict GO terms from Neighborhoods
BP	GO:0009664	plant-type cell wall organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0009790	embryo development	IEP	Predict GO terms from Neighborhoods
BP	GO:0009793	embryo development ending in seed dormancy	IEP	Predict GO terms from Neighborhoods
BP	GO:0009827	plant-type cell wall modification	IEP	Predict GO terms from Neighborhoods
BP	GO:0009828	plant-type cell wall loosening	IEP	Predict GO terms from Neighborhoods
CC	GO:0009897	external side of plasma membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0009913	epidermal cell differentiation	IEP	Predict GO terms from Neighborhoods
BP	GO:0010025	wax biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0010029	regulation of seed germination	IEP	Predict GO terms from Neighborhoods
BP	GO:0010053	root epidermal cell differentiation	IEP	Predict GO terms from Neighborhoods
BP	GO:0010065	primary meristem tissue development	IEP	Predict GO terms from Neighborhoods
BP	GO:0010068	protoderm histogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0010091	trichome branching	IEP	Predict GO terms from Neighborhoods
BP	GO:0010166	wax metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0010222	stem vascular tissue pattern formation	IEP	Predict GO terms from Neighborhoods
BP	GO:0010232	vascular transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0010345	suberin biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0010588	cotyledon vascular tissue pattern formation	IEP	Predict GO terms from Neighborhoods
BP	GO:0010597	green leaf volatile biosynthetic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0015143	urate transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0015245	fatty acid transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0015562	efflux transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0015908	fatty acid transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0019372	lipoxygenase pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0019722	calcium-mediated signaling	IEP	Predict GO terms from Neighborhoods
BP	GO:0019932	second-messenger-mediated signaling	IEP	Predict GO terms from Neighborhoods
BP	GO:0021700	developmental maturation	IEP	Predict GO terms from Neighborhoods
BP	GO:0030855	epithelial cell differentiation	IEP	Predict GO terms from Neighborhoods
CC	GO:0031253	cell projection membrane	IEP	Predict GO terms from Neighborhoods
CC	GO:0031526	brush border membrane	IEP	Predict GO terms from Neighborhoods
MF	GO:0032216	glucosaminyl-phosphatidylinositol O-acyltransferase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0032217	riboflavin transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0032218	riboflavin transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0032870	cellular response to hormone stimulus	IEP	Predict GO terms from Neighborhoods
BP	GO:0042335	cuticle development	IEP	Predict GO terms from Neighborhoods
BP	GO:0042545	cell wall modification	IEP	Predict GO terms from Neighborhoods
MF	GO:0042626	ATPase-coupled transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0042887	amide transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0042908	xenobiotic transport	IEP	Predict GO terms from Neighborhoods
MF	GO:0042910	xenobiotic transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0043473	pigmentation	IEP	Predict GO terms from Neighborhoods
BP	GO:0043476	pigment accumulation	IEP	Predict GO terms from Neighborhoods
BP	GO:0043478	pigment accumulation in response to UV light	IEP	Predict GO terms from Neighborhoods
BP	GO:0043479	pigment accumulation in tissues in response to UV light	IEP	Predict GO terms from Neighborhoods
BP	GO:0043480	pigment accumulation in tissues	IEP	Predict GO terms from Neighborhoods
BP	GO:0043481	anthocyanin accumulation in tissues in response to UV light	IEP	Predict GO terms from Neighborhoods
BP	GO:0045017	glycerolipid biosynthetic process	IEP	Predict GO terms from Neighborhoods
CC	GO:0045121	membrane raft	IEP	Predict GO terms from Neighborhoods
BP	GO:0045595	regulation of cell differentiation	IEP	Predict GO terms from Neighborhoods
BP	GO:0045596	negative regulation of cell differentiation	IEP	Predict GO terms from Neighborhoods
BP	GO:0046415	urate metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0046467	membrane lipid biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0046474	glycerophospholipid biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0046488	phosphatidylinositol metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0048366	leaf development	IEP	Predict GO terms from Neighborhoods
BP	GO:0048469	cell maturation	IEP	Predict GO terms from Neighborhoods
BP	GO:0048497	maintenance of floral organ identity	IEP	Predict GO terms from Neighborhoods
BP	GO:0048507	meristem development	IEP	Predict GO terms from Neighborhoods
BP	GO:0048508	embryonic meristem development	IEP	Predict GO terms from Neighborhoods
BP	GO:0048580	regulation of post-embryonic development	IEP	Predict GO terms from Neighborhoods
BP	GO:0048764	trichoblast maturation	IEP	Predict GO terms from Neighborhoods
BP	GO:0048765	root hair cell differentiation	IEP	Predict GO terms from Neighborhoods
BP	GO:0048825	cotyledon development	IEP	Predict GO terms from Neighborhoods
BP	GO:0048827	phyllome development	IEP	Predict GO terms from Neighborhoods
MF	GO:0051020	GTPase binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0051093	negative regulation of developmental process	IEP	Predict GO terms from Neighborhoods
BP	GO:0051180	vitamin transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0070633	transepithelial transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0071310	cellular response to organic substance	IEP	Predict GO terms from Neighborhoods
BP	GO:0071369	cellular response to ethylene stimulus	IEP	Predict GO terms from Neighborhoods
BP	GO:0071495	cellular response to endogenous stimulus	IEP	Predict GO terms from Neighborhoods
BP	GO:0071669	plant-type cell wall organization or biogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0071695	anatomical structure maturation	IEP	Predict GO terms from Neighborhoods
BP	GO:0072659	protein localization to plasma membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0080050	regulation of seed development	IEP	Predict GO terms from Neighborhoods
BP	GO:0080051	cutin transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0080172	petal epidermis patterning	IEP	Predict GO terms from Neighborhoods
MF	GO:0090482	vitamin transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0090558	plant epidermis development	IEP	Predict GO terms from Neighborhoods
BP	GO:0090627	plant epidermal cell differentiation	IEP	Predict GO terms from Neighborhoods
BP	GO:0090700	maintenance of plant organ identity	IEP	Predict GO terms from Neighborhoods
BP	GO:0097254	renal tubular secretion	IEP	Predict GO terms from Neighborhoods
BP	GO:0097744	renal urate salt excretion	IEP	Predict GO terms from Neighborhoods
CC	GO:0098552	side of membrane	IEP	Predict GO terms from Neighborhoods
CC	GO:0098857	membrane microdomain	IEP	Predict GO terms from Neighborhoods
BP	GO:0120251	hydrocarbon biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0120252	hydrocarbon metabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0140110	transcription regulator activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0140115	export across plasma membrane	IEP	Predict GO terms from Neighborhoods
MF	GO:0140359	ABC-type transporter activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0150104	transport across blood-brain barrier	IEP	Predict GO terms from Neighborhoods
BP	GO:1900140	regulation of seedling development	IEP	Predict GO terms from Neighborhoods
BP	GO:1900457	regulation of brassinosteroid mediated signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:1900459	positive regulation of brassinosteroid mediated signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:1901568	fatty acid derivative metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1901570	fatty acid derivative biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1901576	organic substance biosynthetic process	IEP	Predict GO terms from Neighborhoods
MF	GO:1901702	salt transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
BP	GO:1903509	liposaccharide metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1990748	cellular detoxification	IEP	Predict GO terms from Neighborhoods
BP	GO:1990778	protein localization to cell periphery	IEP	Predict GO terms from Neighborhoods
MF	GO:1990837	sequence-specific double-stranded DNA binding	IEP	Predict GO terms from Neighborhoods
BP	GO:1990962	xenobiotic transport across blood-brain barrier	IEP	Predict GO terms from Neighborhoods
BP	GO:2000033	regulation of seed dormancy process	IEP	Predict GO terms from Neighborhoods
BP	GO:2000034	regulation of seed maturation	IEP	Predict GO terms from Neighborhoods
BP	GO:2000241	regulation of reproductive process	IEP	Predict GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR001611	Leu-rich_rpt	248	305
IPR001611	Leu-rich_rpt	430	486
IPR001611	Leu-rich_rpt	101	157
IPR001611	Leu-rich_rpt	591	650
IPR001611	Leu-rich_rpt	737	794
IPR011009	Kinase-like_dom_sf	885	1178
IPR000719	Prot_kinase_dom	906	1175
IPR013210	LRR_N_plant-typ	27	69

External Links

No external refs found!

SOLTUB.AGRIA.G00000039593

Expression Profile

Co-expression Networks

Functional Annotation