SOLTUB.AGRIA.G00000039606

Description : RING/U-box superfamily protein, putative

Gene families : OG_02_0017657 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000039606
Cluster	HCCA Clusters (HRR 50 & PCC 0.5): Cluster_174

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004842	ubiquitin-protein transferase activity	IEA	AHRD
MF	GO:0005488	binding	IEA	AHRD
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006952	defense response	None	Extended
BP	GO:0007154	cell communication	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009605	response to external stimulus	None	Extended
BP	GO:0009607	response to biotic stimulus	None	Extended
BP	GO:0009617	response to bacterium	None	Extended
BP	GO:0009620	response to fungus	None	Extended
BP	GO:0009628	response to abiotic stimulus	IEA	AHRD
BP	GO:0009719	response to endogenous stimulus	None	Extended
BP	GO:0009725	response to hormone	None	Extended
BP	GO:0009737	response to abscisic acid	IEA	AHRD
BP	GO:0009987	cellular process	None	Extended
BP	GO:0009991	response to extracellular stimulus	None	Extended
BP	GO:0010033	response to organic substance	None	Extended
BP	GO:0010200	response to chitin	IEA	AHRD
BP	GO:0010243	response to organonitrogen compound	None	Extended
CC	GO:0016020	membrane	IEA	AHRD
BP	GO:0016567	protein ubiquitination	IEA	AHRD
MF	GO:0016740	transferase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0019787	ubiquitin-like protein transferase activity	None	Extended
BP	GO:0031667	response to nutrient levels	None	Extended
BP	GO:0031668	cellular response to extracellular stimulus	None	Extended
BP	GO:0031669	cellular response to nutrient levels	None	Extended
BP	GO:0032446	protein modification by small protein conjugation	None	Extended
BP	GO:0033993	response to lipid	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0042221	response to chemical	None	Extended
BP	GO:0042742	defense response to bacterium	IEA	AHRD
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043207	response to external biotic stimulus	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0043562	cellular response to nitrogen levels	IEA	AHRD
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044419	biological process involved in interspecies interaction between organisms	None	Extended
BP	GO:0050832	defense response to fungus	IEA	AHRD
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051707	response to other organism	None	Extended
BP	GO:0051716	cellular response to stimulus	None	Extended
BP	GO:0070647	protein modification by small protein conjugation or removal	None	Extended
BP	GO:0071496	cellular response to external stimulus	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0097305	response to alcohol	None	Extended
BP	GO:0098542	defense response to other organism	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901698	response to nitrogen compound	None	Extended
BP	GO:1901700	response to oxygen-containing compound	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0001523	retinoid metabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0001758	retinal dehydrogenase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0001822	kidney development	IEP	Predict GO terms from Neighborhoods
BP	GO:0001889	liver development	IEP	Predict GO terms from Neighborhoods
BP	GO:0001894	tissue homeostasis	IEP	Predict GO terms from Neighborhoods
BP	GO:0002072	optic cup morphogenesis involved in camera-type eye development	IEP	Predict GO terms from Neighborhoods
BP	GO:0002138	retinoic acid biosynthetic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0004028	3-chloroallyl aldehyde dehydrogenase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004029	aldehyde dehydrogenase (NAD+) activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004030	aldehyde dehydrogenase [NAD(P)+] activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004064	arylesterase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004364	glutathione transferase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0005096	GTPase activator activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0005497	androgen binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0006040	amino sugar metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006081	cellular aldehyde metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006720	isoprenoid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006721	terpenoid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006722	triterpenoid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006749	glutathione metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0007494	midgut development	IEP	Predict GO terms from Neighborhoods
BP	GO:0007612	learning	IEP	Predict GO terms from Neighborhoods
BP	GO:0008299	isoprenoid biosynthetic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0008395	steroid hydroxylase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0008610	lipid biosynthetic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0008774	acetaldehyde dehydrogenase (acetylating) activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0008957	phenylacetaldehyde dehydrogenase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0009407	toxin catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009448	gamma-aminobutyric acid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009449	gamma-aminobutyric acid biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009606	tropism	IEP	Predict GO terms from Neighborhoods
BP	GO:0009657	plastid organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0009658	chloroplast organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0009699	phenylpropanoid biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009704	de-etiolation	IEP	Predict GO terms from Neighborhoods
BP	GO:0010268	brassinosteroid homeostasis	IEP	Predict GO terms from Neighborhoods
BP	GO:0010274	hydrotropism	IEP	Predict GO terms from Neighborhoods
BP	GO:0010817	regulation of hormone levels	IEP	Predict GO terms from Neighborhoods
BP	GO:0014070	response to organic cyclic compound	IEP	Predict GO terms from Neighborhoods
BP	GO:0016104	triterpenoid biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0016105	triterpenoid catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0016114	terpenoid biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0016131	brassinosteroid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0016137	glycoside metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0016138	glycoside biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0016331	morphogenesis of embryonic epithelium	IEP	Predict GO terms from Neighborhoods
MF	GO:0016620	oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor	IEP	Predict GO terms from Neighborhoods
MF	GO:0016634	oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor	IEP	Predict GO terms from Neighborhoods
MF	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	IEP	Predict GO terms from Neighborhoods
MF	GO:0018479	benzaldehyde dehydrogenase (NAD+) activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0018973	trinitrotoluene metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0018974	2,4,6-trinitrotoluene metabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0019115	benzaldehyde dehydrogenase [NAD(P)+] activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0019145	aminobutyraldehyde dehydrogenase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0019326	nitrotoluene metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0019741	pentacyclic triterpenoid catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0019742	pentacyclic triterpenoid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0019745	pentacyclic triterpenoid biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0019748	secondary metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0030389	fructosamine metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0030392	fructosamine catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0032355	response to estradiol	IEP	Predict GO terms from Neighborhoods
BP	GO:0032526	response to retinoic acid	IEP	Predict GO terms from Neighborhoods
CC	GO:0032541	cortical endoplasmic reticulum	IEP	Predict GO terms from Neighborhoods
MF	GO:0033721	aldehyde dehydrogenase (NADP+) activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0034308	primary alcohol metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0034754	cellular hormone metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0035106	operant conditioning	IEP	Predict GO terms from Neighborhoods
BP	GO:0036438	maintenance of lens transparency	IEP	Predict GO terms from Neighborhoods
BP	GO:0042181	ketone biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0042182	ketone catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0042445	hormone metabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0042562	hormone binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0042572	retinol metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0042573	retinoic acid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0042698	ovulation cycle	IEP	Predict GO terms from Neighborhoods
BP	GO:0042904	9-cis-retinoic acid biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0042905	9-cis-retinoic acid metabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0043295	glutathione binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0043878	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (non-phosphorylating) activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0044255	cellular lipid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0044849	estrous cycle	IEP	Predict GO terms from Neighborhoods
BP	GO:0045471	response to ethanol	IEP	Predict GO terms from Neighborhoods
BP	GO:0046184	aldehyde biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0046256	2,4,6-trinitrotoluene catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0046260	trinitrotoluene catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0046263	nitrotoluene catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0046348	amino sugar catabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0047807	cytokinin 7-beta-glucosyltransferase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0048565	digestive tract development	IEP	Predict GO terms from Neighborhoods
MF	GO:0050403	trans-zeatin O-beta-D-glucosyltransferase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0050502	cis-zeatin O-beta-D-glucosyltransferase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0050616	secologanin synthase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0051287	NAD binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0060249	anatomical structure homeostasis	IEP	Predict GO terms from Neighborhoods
BP	GO:0060416	response to growth hormone	IEP	Predict GO terms from Neighborhoods
CC	GO:0071782	endoplasmic reticulum tubular network	IEP	Predict GO terms from Neighborhoods
BP	GO:0072330	monocarboxylic acid biosynthetic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0072341	modified amino acid binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0072490	toluene-containing compound metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0072491	toluene-containing compound catabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0080062	cytokinin 9-beta-glucosyltransferase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0080148	negative regulation of response to water deprivation	IEP	Predict GO terms from Neighborhoods
BP	GO:0098754	detoxification	IEP	Predict GO terms from Neighborhoods
CC	GO:0098827	endoplasmic reticulum subcompartment	IEP	Predict GO terms from Neighborhoods
MF	GO:0106373	3-deoxyglucosone dehydrogenase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0110095	cellular detoxification of aldehyde	IEP	Predict GO terms from Neighborhoods
BP	GO:0120161	regulation of cold-induced thermogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0120163	negative regulation of cold-induced thermogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0120254	olefinic compound metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1900000	regulation of anthocyanin catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1900367	positive regulation of defense response to insect	IEP	Predict GO terms from Neighborhoods
MF	GO:1900750	oligopeptide binding	IEP	Predict GO terms from Neighborhoods
BP	GO:1900992	(-)-secologanin metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1900994	(-)-secologanin biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1901135	carbohydrate derivative metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1901137	carbohydrate derivative biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1901361	organic cyclic compound catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1901362	organic cyclic compound biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1901527	abscisic acid-activated signaling pathway involved in stomatal movement	IEP	Predict GO terms from Neighborhoods
BP	GO:1901657	glycosyl compound metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1901659	glycosyl compound biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1901804	beta-glucoside metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1901806	beta-glucoside biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1902381	11-oxo-beta-amyrin metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1902382	11-oxo-beta-amyrin catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1902384	glycyrrhetinate metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1902386	glycyrrhetinate biosynthetic process	IEP	Predict GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR001841	Znf_RING	131	174

External Links

No external refs found!

SOLTUB.AGRIA.G00000039606

Expression Profile

Co-expression Networks

Functional Annotation