| BP | GO:0000154 | rRNA modification | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0000179 | rRNA (adenine-N6,N6-)-dimethyltransferase activity | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0000427 | plastid-encoded plastid RNA polymerase complex | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0000428 | DNA-directed RNA polymerase complex | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0000470 | maturation of LSU-rRNA | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0000488 | maturation of LSU-rRNA from tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA) | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0000489 | maturation of SSU-rRNA from tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA) | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0000966 | RNA 5'-end processing | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0001510 | RNA methylation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0001522 | pseudouridine synthesis | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0001682 | tRNA 5'-leader removal | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0003887 | DNA-directed DNA polymerase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0003899 | DNA-directed 5'-3' RNA polymerase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0003933 | GTP cyclohydrolase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0003935 | GTP cyclohydrolase II activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0004325 | ferrochelatase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0004518 | nuclease activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0004521 | endoribonuclease activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0004526 | ribonuclease P activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0004527 | exonuclease activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0004549 | tRNA-specific ribonuclease activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0005525 | GTP binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006220 | pyrimidine nucleotide metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006221 | pyrimidine nucleotide biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006225 | UDP biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006241 | CTP biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006261 | DNA-templated DNA replication | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006264 | mitochondrial DNA replication | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006390 | mitochondrial transcription | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006771 | riboflavin metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006779 | porphyrin-containing compound biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006783 | heme biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0008168 | methyltransferase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0008173 | RNA methyltransferase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0008174 | mRNA methyltransferase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0008408 | 3'-5' exonuclease activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0008649 | rRNA methyltransferase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0008686 | 3,4-dihydroxy-2-butanone-4-phosphate synthase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0009041 | uridylate kinase activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009123 | nucleoside monophosphate metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009132 | nucleoside diphosphate metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009133 | nucleoside diphosphate biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009138 | pyrimidine nucleoside diphosphate metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009139 | pyrimidine nucleoside diphosphate biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009142 | nucleoside triphosphate biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009147 | pyrimidine nucleoside triphosphate metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009148 | pyrimidine nucleoside triphosphate biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009185 | ribonucleoside diphosphate metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009188 | ribonucleoside diphosphate biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009193 | pyrimidine ribonucleoside diphosphate metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009194 | pyrimidine ribonucleoside diphosphate biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009201 | ribonucleoside triphosphate biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009208 | pyrimidine ribonucleoside triphosphate metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009209 | pyrimidine ribonucleoside triphosphate biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009218 | pyrimidine ribonucleotide metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009220 | pyrimidine ribonucleotide biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009231 | riboflavin biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0009295 | nucleoid | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009451 | RNA modification | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0009501 | amyloplast | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0009507 | chloroplast | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0009508 | plastid chromosome | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0009536 | plastid | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0009982 | pseudouridine synthase activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0016074 | sno(s)RNA metabolic process | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0016422 | mRNA (2'-O-methyladenosine-N6-)-methyltransferase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0016433 | rRNA (adenine) methyltransferase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0016741 | transferase activity, transferring one-carbon groups | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0016776 | phosphotransferase activity, phosphate group as acceptor | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0016779 | nucleotidyltransferase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0016814 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0016829 | lyase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0016866 | intramolecular transferase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0016891 | endoribonuclease activity, producing 5'-phosphomonoesters | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0016893 | endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0019001 | guanyl nucleotide binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0019205 | nucleobase-containing compound kinase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0019238 | cyclohydrolase activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0030490 | maturation of SSU-rRNA | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0030880 | RNA polymerase complex | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0031167 | rRNA methylation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0032042 | mitochondrial DNA metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0032259 | methylation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0032544 | plastid translation | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0032561 | guanyl ribonucleotide binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0033014 | tetrapyrrole biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0033258 | plastid DNA metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0033259 | plastid DNA replication | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0033862 | UMP kinase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0034061 | DNA polymerase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0034062 | 5'-3' RNA polymerase activity | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0034245 | mitochondrial DNA-directed RNA polymerase complex | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0042168 | heme metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0042254 | ribosome biogenesis | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0042364 | water-soluble vitamin biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0042644 | chloroplast nucleoid | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0042645 | mitochondrial nucleoid | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0042646 | plastid nucleoid | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0042726 | flavin-containing compound metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0042727 | flavin-containing compound biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0043144 | sno(s)RNA processing | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0043414 | macromolecule methylation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0044210 | 'de novo' CTP biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0046036 | CTP metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0046048 | UDP metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0046940 | nucleoside monophosphate phosphorylation | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0050145 | nucleoside monophosphate kinase activity | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0061695 | transferase complex, transferring phosphorus-containing groups | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0071897 | DNA biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0072527 | pyrimidine-containing compound metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0072528 | pyrimidine-containing compound biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0080009 | mRNA methylation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0090305 | nucleic acid phosphodiester bond hydrolysis | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0097747 | RNA polymerase activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0099116 | tRNA 5'-end processing | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0140102 | catalytic activity, acting on a rRNA | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | Predict GO terms from Neighborhoods |