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Description : High mobility group family
Gene families : OG_02_0004192 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000040222 | |
| Cluster | HCCA Clusters (HRR 50 & PCC 0.5): Cluster_263 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000018 | regulation of DNA recombination | None | Extended |
| BP | GO:0000122 | negative regulation of transcription by RNA polymerase II | IEA | AHRD |
| MF | GO:0000217 | DNA secondary structure binding | None | Extended |
| MF | GO:0000400 | four-way junction DNA binding | IEA | AHRD |
| BP | GO:0000741 | karyogamy | None | Extended |
| BP | GO:0000902 | cell morphogenesis | None | Extended |
| BP | GO:0000904 | cell morphogenesis involved in differentiation | None | Extended |
| MF | GO:0000976 | transcription cis-regulatory region binding | IEA | AHRD |
| MF | GO:0001067 | transcription regulatory region nucleic acid binding | None | Extended |
| BP | GO:0003002 | regionalization | None | Extended |
| BP | GO:0003006 | developmental process involved in reproduction | None | Extended |
| BP | GO:0003007 | heart morphogenesis | IEA | AHRD |
| MF | GO:0003674 | molecular_function | None | Extended |
| MF | GO:0003676 | nucleic acid binding | None | Extended |
| MF | GO:0003677 | DNA binding | None | Extended |
| MF | GO:0003682 | chromatin binding | IEA | AHRD |
| MF | GO:0003690 | double-stranded DNA binding | None | Extended |
| MF | GO:0003712 | transcription coregulator activity | IEA | AHRD |
| MF | GO:0005488 | binding | None | Extended |
| MF | GO:0005515 | protein binding | None | Extended |
| CC | GO:0005575 | cellular_component | None | Extended |
| CC | GO:0005654 | nucleoplasm | IEA | AHRD |
| CC | GO:0005694 | chromosome | None | Extended |
| CC | GO:0005700 | polytene chromosome | IEA | AHRD |
| CC | GO:0005829 | cytosol | IEA | AHRD |
| CC | GO:0005886 | plasma membrane | IEA | AHRD |
| BP | GO:0006082 | organic acid metabolic process | None | Extended |
| BP | GO:0006282 | regulation of DNA repair | None | Extended |
| BP | GO:0006325 | chromatin organization | None | Extended |
| BP | GO:0006337 | nucleosome disassembly | IEA | AHRD |
| BP | GO:0006338 | chromatin remodeling | None | Extended |
| BP | GO:0006355 | regulation of DNA-templated transcription | None | Extended |
| BP | GO:0006357 | regulation of transcription by RNA polymerase II | None | Extended |
| BP | GO:0006790 | sulfur compound metabolic process | None | Extended |
| BP | GO:0006807 | nitrogen compound metabolic process | None | Extended |
| BP | GO:0006996 | organelle organization | None | Extended |
| BP | GO:0006997 | nucleus organization | None | Extended |
| BP | GO:0007379 | segment specification | IEA | AHRD |
| BP | GO:0007389 | pattern specification process | None | Extended |
| BP | GO:0007406 | negative regulation of neuroblast proliferation | IEA | AHRD |
| BP | GO:0007411 | axon guidance | IEA | AHRD |
| BP | GO:0007447 | imaginal disc pattern formation | None | Extended |
| BP | GO:0007450 | dorsal/ventral pattern formation, imaginal disc | None | Extended |
| BP | GO:0007517 | muscle organ development | IEA | AHRD |
| BP | GO:0007610 | behavior | None | Extended |
| BP | GO:0007617 | mating behavior | None | Extended |
| BP | GO:0007619 | courtship behavior | None | Extended |
| BP | GO:0008049 | male courtship behavior | IEA | AHRD |
| MF | GO:0008134 | transcription factor binding | None | Extended |
| BP | GO:0008150 | biological_process | None | Extended |
| BP | GO:0008152 | metabolic process | None | Extended |
| BP | GO:0008283 | cell population proliferation | None | Extended |
| BP | GO:0008285 | negative regulation of cell population proliferation | None | Extended |
| BP | GO:0008586 | imaginal disc-derived wing vein morphogenesis | IEA | AHRD |
| BP | GO:0008587 | imaginal disc-derived wing margin morphogenesis | IEA | AHRD |
| BP | GO:0009653 | anatomical structure morphogenesis | None | Extended |
| BP | GO:0009826 | unidimensional cell growth | None | Extended |
| BP | GO:0009846 | pollen germination | IEA | AHRD |
| BP | GO:0009860 | pollen tube growth | IEA | AHRD |
| BP | GO:0009880 | embryonic pattern specification | IEA | AHRD |
| BP | GO:0009886 | post-embryonic animal morphogenesis | None | Extended |
| BP | GO:0009887 | animal organ morphogenesis | None | Extended |
| BP | GO:0009889 | regulation of biosynthetic process | None | Extended |
| BP | GO:0009890 | negative regulation of biosynthetic process | None | Extended |
| BP | GO:0009891 | positive regulation of biosynthetic process | None | Extended |
| BP | GO:0009892 | negative regulation of metabolic process | None | Extended |
| BP | GO:0009893 | positive regulation of metabolic process | None | Extended |
| BP | GO:0009932 | cell tip growth | None | Extended |
| BP | GO:0009952 | anterior/posterior pattern specification | IEA | AHRD |
| BP | GO:0009953 | dorsal/ventral pattern formation | None | Extended |
| BP | GO:0009987 | cellular process | None | Extended |
| BP | GO:0010197 | polar nucleus fusion | IEA | AHRD |
| BP | GO:0010468 | regulation of gene expression | None | Extended |
| BP | GO:0010556 | regulation of macromolecule biosynthetic process | None | Extended |
| BP | GO:0010557 | positive regulation of macromolecule biosynthetic process | None | Extended |
| BP | GO:0010558 | negative regulation of macromolecule biosynthetic process | None | Extended |
| BP | GO:0010569 | regulation of double-strand break repair via homologous recombination | None | Extended |
| BP | GO:0010604 | positive regulation of macromolecule metabolic process | None | Extended |
| BP | GO:0010605 | negative regulation of macromolecule metabolic process | None | Extended |
| BP | GO:0010721 | negative regulation of cell development | None | Extended |
| BP | GO:0014017 | neuroblast fate commitment | IEA | AHRD |
| BP | GO:0014855 | striated muscle cell proliferation | None | Extended |
| CC | GO:0016020 | membrane | None | Extended |
| BP | GO:0016043 | cellular component organization | None | Extended |
| BP | GO:0016049 | cell growth | None | Extended |
| BP | GO:0016143 | S-glycoside metabolic process | None | Extended |
| BP | GO:0019098 | reproductive behavior | None | Extended |
| BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | None | Extended |
| BP | GO:0019222 | regulation of metabolic process | None | Extended |
| BP | GO:0019748 | secondary metabolic process | None | Extended |
| BP | GO:0019757 | glycosinolate metabolic process | None | Extended |
| BP | GO:0019760 | glucosinolate metabolic process | IEA | AHRD |
| BP | GO:0022008 | neurogenesis | None | Extended |
| BP | GO:0022411 | cellular component disassembly | None | Extended |
| BP | GO:0022414 | reproductive process | None | Extended |
| BP | GO:0030030 | cell projection organization | None | Extended |
| BP | GO:0030154 | cell differentiation | None | Extended |
| BP | GO:0030334 | regulation of cell migration | None | Extended |
| BP | GO:0030336 | negative regulation of cell migration | IEA | AHRD |
| BP | GO:0031175 | neuron projection development | None | Extended |
| BP | GO:0031323 | regulation of cellular metabolic process | None | Extended |
| BP | GO:0031324 | negative regulation of cellular metabolic process | None | Extended |
| BP | GO:0031325 | positive regulation of cellular metabolic process | None | Extended |
| BP | GO:0031326 | regulation of cellular biosynthetic process | None | Extended |
| BP | GO:0031327 | negative regulation of cellular biosynthetic process | None | Extended |
| BP | GO:0031328 | positive regulation of cellular biosynthetic process | None | Extended |
| BP | GO:0032501 | multicellular organismal process | None | Extended |
| BP | GO:0032502 | developmental process | None | Extended |
| BP | GO:0032984 | protein-containing complex disassembly | None | Extended |
| BP | GO:0032986 | protein-DNA complex disassembly | None | Extended |
| BP | GO:0032989 | cellular component morphogenesis | None | Extended |
| BP | GO:0032990 | cell part morphogenesis | None | Extended |
| CC | GO:0032991 | protein-containing complex | None | Extended |
| BP | GO:0033002 | muscle cell proliferation | None | Extended |
| BP | GO:0034728 | nucleosome organization | None | Extended |
| CC | GO:0035060 | brahma complex | IEA | AHRD |
| BP | GO:0035222 | wing disc pattern formation | None | Extended |
| BP | GO:0035239 | tube morphogenesis | None | Extended |
| BP | GO:0040007 | growth | None | Extended |
| BP | GO:0040012 | regulation of locomotion | None | Extended |
| BP | GO:0040013 | negative regulation of locomotion | None | Extended |
| BP | GO:0042063 | gliogenesis | IEA | AHRD |
| BP | GO:0042127 | regulation of cell population proliferation | None | Extended |
| BP | GO:0042592 | homeostatic process | IEA | AHRD |
| MF | GO:0042802 | identical protein binding | IEA | AHRD |
| CC | GO:0042995 | cell projection | None | Extended |
| CC | GO:0043226 | organelle | None | Extended |
| CC | GO:0043228 | non-membrane-bounded organelle | None | Extended |
| CC | GO:0043229 | intracellular organelle | None | Extended |
| CC | GO:0043232 | intracellular non-membrane-bounded organelle | None | Extended |
| BP | GO:0043436 | oxoacid metabolic process | None | Extended |
| MF | GO:0043565 | sequence-specific DNA binding | None | Extended |
| BP | GO:0043933 | protein-containing complex organization | None | Extended |
| BP | GO:0044237 | cellular metabolic process | None | Extended |
| BP | GO:0044281 | small molecule metabolic process | None | Extended |
| CC | GO:0045121 | membrane raft | IEA | AHRD |
| BP | GO:0045165 | cell fate commitment | None | Extended |
| BP | GO:0045595 | regulation of cell differentiation | None | Extended |
| BP | GO:0045596 | negative regulation of cell differentiation | None | Extended |
| BP | GO:0045739 | positive regulation of DNA repair | None | Extended |
| BP | GO:0045892 | negative regulation of DNA-templated transcription | None | Extended |
| BP | GO:0045893 | positive regulation of DNA-templated transcription | None | Extended |
| BP | GO:0045911 | positive regulation of DNA recombination | None | Extended |
| BP | GO:0045924 | regulation of female receptivity | IEA | AHRD |
| BP | GO:0045934 | negative regulation of nucleobase-containing compound metabolic process | None | Extended |
| BP | GO:0045935 | positive regulation of nucleobase-containing compound metabolic process | None | Extended |
| BP | GO:0045944 | positive regulation of transcription by RNA polymerase II | IEA | AHRD |
| BP | GO:0048190 | wing disc dorsal/ventral pattern formation | IEA | AHRD |
| BP | GO:0048284 | organelle fusion | None | Extended |
| BP | GO:0048513 | animal organ development | None | Extended |
| BP | GO:0048514 | blood vessel morphogenesis | None | Extended |
| BP | GO:0048518 | positive regulation of biological process | None | Extended |
| BP | GO:0048519 | negative regulation of biological process | None | Extended |
| BP | GO:0048522 | positive regulation of cellular process | None | Extended |
| BP | GO:0048523 | negative regulation of cellular process | None | Extended |
| BP | GO:0048568 | embryonic organ development | IEA | AHRD |
| BP | GO:0048583 | regulation of response to stimulus | None | Extended |
| BP | GO:0048584 | positive regulation of response to stimulus | None | Extended |
| BP | GO:0048588 | developmental cell growth | None | Extended |
| BP | GO:0048589 | developmental growth | None | Extended |
| BP | GO:0048812 | neuron projection morphogenesis | None | Extended |
| BP | GO:0048813 | dendrite morphogenesis | IEA | AHRD |
| BP | GO:0048844 | artery morphogenesis | None | Extended |
| BP | GO:0048856 | anatomical structure development | None | Extended |
| BP | GO:0048858 | cell projection morphogenesis | None | Extended |
| BP | GO:0048869 | cellular developmental process | None | Extended |
| BP | GO:0050767 | regulation of neurogenesis | None | Extended |
| BP | GO:0050768 | negative regulation of neurogenesis | None | Extended |
| BP | GO:0050789 | regulation of biological process | None | Extended |
| BP | GO:0050793 | regulation of developmental process | None | Extended |
| BP | GO:0050794 | regulation of cellular process | None | Extended |
| BP | GO:0051052 | regulation of DNA metabolic process | None | Extended |
| BP | GO:0051054 | positive regulation of DNA metabolic process | None | Extended |
| BP | GO:0051093 | negative regulation of developmental process | None | Extended |
| BP | GO:0051171 | regulation of nitrogen compound metabolic process | None | Extended |
| BP | GO:0051172 | negative regulation of nitrogen compound metabolic process | None | Extended |
| BP | GO:0051173 | positive regulation of nitrogen compound metabolic process | None | Extended |
| BP | GO:0051239 | regulation of multicellular organismal process | None | Extended |
| BP | GO:0051241 | negative regulation of multicellular organismal process | None | Extended |
| BP | GO:0051252 | regulation of RNA metabolic process | None | Extended |
| BP | GO:0051253 | negative regulation of RNA metabolic process | None | Extended |
| BP | GO:0051254 | positive regulation of RNA metabolic process | None | Extended |
| BP | GO:0051960 | regulation of nervous system development | None | Extended |
| BP | GO:0051961 | negative regulation of nervous system development | None | Extended |
| BP | GO:0060038 | cardiac muscle cell proliferation | IEA | AHRD |
| BP | GO:0060179 | male mating behavior | None | Extended |
| BP | GO:0060180 | female mating behavior | None | Extended |
| BP | GO:0060255 | regulation of macromolecule metabolic process | None | Extended |
| BP | GO:0060284 | regulation of cell development | None | Extended |
| BP | GO:0060560 | developmental growth involved in morphogenesis | None | Extended |
| BP | GO:0060977 | coronary vasculature morphogenesis | None | Extended |
| BP | GO:0060982 | coronary artery morphogenesis | IEA | AHRD |
| BP | GO:0061061 | muscle structure development | None | Extended |
| BP | GO:0065007 | biological regulation | None | Extended |
| BP | GO:0065008 | regulation of biological quality | None | Extended |
| CC | GO:0070603 | SWI/SNF superfamily-type complex | None | Extended |
| BP | GO:0071704 | organic substance metabolic process | None | Extended |
| BP | GO:0071824 | protein-DNA complex subunit organization | None | Extended |
| BP | GO:0071840 | cellular component organization or biogenesis | None | Extended |
| BP | GO:0080090 | regulation of primary metabolic process | None | Extended |
| BP | GO:0080134 | regulation of response to stress | None | Extended |
| BP | GO:0080135 | regulation of cellular response to stress | None | Extended |
| CC | GO:0090406 | pollen tube | IEA | AHRD |
| MF | GO:0097159 | organic cyclic compound binding | None | Extended |
| BP | GO:0097485 | neuron projection guidance | None | Extended |
| CC | GO:0098857 | membrane microdomain | None | Extended |
| CC | GO:0110165 | cellular anatomical entity | None | Extended |
| CC | GO:0120025 | plasma membrane bounded cell projection | None | Extended |
| BP | GO:0120036 | plasma membrane bounded cell projection organization | None | Extended |
| BP | GO:0120039 | plasma membrane bounded cell projection morphogenesis | None | Extended |
| MF | GO:0140110 | transcription regulator activity | None | Extended |
| MF | GO:0140297 | DNA-binding transcription factor binding | IEA | AHRD |
| CC | GO:0140513 | nuclear protein-containing complex | None | Extended |
| BP | GO:1901135 | carbohydrate derivative metabolic process | None | Extended |
| MF | GO:1901363 | heterocyclic compound binding | None | Extended |
| BP | GO:1901564 | organonitrogen compound metabolic process | None | Extended |
| BP | GO:1901657 | glycosyl compound metabolic process | None | Extended |
| CC | GO:1902494 | catalytic complex | None | Extended |
| BP | GO:1902679 | negative regulation of RNA biosynthetic process | None | Extended |
| BP | GO:1902680 | positive regulation of RNA biosynthetic process | None | Extended |
| BP | GO:1902692 | regulation of neuroblast proliferation | None | Extended |
| BP | GO:1903506 | regulation of nucleic acid-templated transcription | None | Extended |
| BP | GO:1903507 | negative regulation of nucleic acid-templated transcription | None | Extended |
| BP | GO:1903508 | positive regulation of nucleic acid-templated transcription | None | Extended |
| CC | GO:1904949 | ATPase complex | None | Extended |
| BP | GO:1905168 | positive regulation of double-strand break repair via homologous recombination | IEA | AHRD |
| MF | GO:1990837 | sequence-specific double-stranded DNA binding | None | Extended |
| BP | GO:2000026 | regulation of multicellular organismal development | None | Extended |
| BP | GO:2000145 | regulation of cell motility | None | Extended |
| BP | GO:2000146 | negative regulation of cell motility | None | Extended |
| BP | GO:2000177 | regulation of neural precursor cell proliferation | None | Extended |
| BP | GO:2000178 | negative regulation of neural precursor cell proliferation | None | Extended |
| BP | GO:2000779 | regulation of double-strand break repair | None | Extended |
| BP | GO:2000781 | positive regulation of double-strand break repair | None | Extended |
| BP | GO:2001020 | regulation of response to DNA damage stimulus | None | Extended |
| BP | GO:2001022 | positive regulation of response to DNA damage stimulus | None | Extended |
| BP | GO:2001141 | regulation of RNA biosynthetic process | None | Extended |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000408 | EKC/KEOPS complex | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0002949 | tRNA threonylcarbamoyladenosine modification | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0003727 | single-stranded RNA binding | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0005737 | cytoplasm | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006399 | tRNA metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006400 | tRNA modification | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006403 | RNA localization | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006417 | regulation of translation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006446 | regulation of translational initiation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0008033 | tRNA processing | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009451 | RNA modification | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009895 | negative regulation of catabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010608 | post-transcriptional regulation of gene expression | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010628 | positive regulation of gene expression | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0016070 | RNA metabolic process | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0016607 | nuclear speck | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0031330 | negative regulation of cellular catabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0034248 | regulation of cellular amide metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0034250 | positive regulation of cellular amide metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0034976 | response to endoplasmic reticulum stress | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0036477 | somatodendritic compartment | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0043487 | regulation of RNA stability | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0043488 | regulation of mRNA stability | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0044703 | multi-organism reproductive process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0045727 | positive regulation of translation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0045948 | positive regulation of translational initiation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051246 | regulation of protein metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051247 | positive regulation of protein metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0061013 | regulation of mRNA catabolic process | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0061711 | N(6)-L-threonylcarbamoyladenine synthase activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0070525 | tRNA threonylcarbamoyladenosine metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1902074 | response to salt | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1902369 | negative regulation of RNA catabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1902373 | negative regulation of mRNA catabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1903311 | regulation of mRNA metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1903312 | negative regulation of mRNA metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:2000112 | regulation of cellular macromolecule biosynthetic process | IEP | Predict GO terms from Neighborhoods |
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