SOLTUB.AGRIA.G00000040430

Description : ATP synthase subunit beta, chloroplastic

Gene families : OG_02_0000667 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000040430
Cluster	HCCA Clusters (HRR 50 & PCC 0.5): Cluster_127

Target	Alias	Description	ECC score	Gene Family Method
SOLTUB.AGRIA.G00000040828	No alias	ATP synthase subunit beta, chloroplastic	0.06	Orthogroups with 8 Potato genotypes
SOLTUB.AGRIA.G00000040828	No alias	ATP synthase subunit beta, chloroplastic	0.06	Orthogroups with 8 Potato genotypes
SOLTUB.AGRIA.G00000040828	No alias	ATP synthase subunit beta, chloroplastic	0.06	Orthogroups with 8 Potato genotypes

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005216	ion channel activity	None	Extended
MF	GO:0005261	cation channel activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	AHRD
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005753	mitochondrial proton-transporting ATP synthase complex	IEA	AHRD
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006163	purine nucleotide metabolic process	None	Extended
BP	GO:0006164	purine nucleotide biosynthetic process	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006753	nucleoside phosphate metabolic process	None	Extended
BP	GO:0006754	ATP biosynthetic process	None	Extended
BP	GO:0006793	phosphorus metabolic process	None	Extended
BP	GO:0006796	phosphate-containing compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008324	cation transmembrane transporter activity	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009117	nucleotide metabolic process	None	Extended
BP	GO:0009141	nucleoside triphosphate metabolic process	None	Extended
BP	GO:0009142	nucleoside triphosphate biosynthetic process	None	Extended
BP	GO:0009144	purine nucleoside triphosphate metabolic process	None	Extended
BP	GO:0009145	purine nucleoside triphosphate biosynthetic process	None	Extended
BP	GO:0009150	purine ribonucleotide metabolic process	None	Extended
BP	GO:0009152	purine ribonucleotide biosynthetic process	None	Extended
BP	GO:0009165	nucleotide biosynthetic process	None	Extended
BP	GO:0009199	ribonucleoside triphosphate metabolic process	None	Extended
BP	GO:0009201	ribonucleoside triphosphate biosynthetic process	None	Extended
BP	GO:0009205	purine ribonucleoside triphosphate metabolic process	None	Extended
BP	GO:0009206	purine ribonucleoside triphosphate biosynthetic process	None	Extended
BP	GO:0009259	ribonucleotide metabolic process	None	Extended
BP	GO:0009260	ribonucleotide biosynthetic process	None	Extended
CC	GO:0009535	chloroplast thylakoid membrane	IEA	AHRD
MF	GO:0009678	pyrophosphate hydrolysis-driven proton transmembrane transporter activity	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0015075	ion transmembrane transporter activity	None	Extended
MF	GO:0015078	proton transmembrane transporter activity	None	Extended
MF	GO:0015252	proton channel activity	None	Extended
MF	GO:0015267	channel activity	None	Extended
MF	GO:0015318	inorganic molecular entity transmembrane transporter activity	None	Extended
MF	GO:0015399	primary active transmembrane transporter activity	None	Extended
BP	GO:0015986	proton motive force-driven ATP synthesis	None	Extended
CC	GO:0016020	membrane	None	Extended
CC	GO:0016469	proton-transporting two-sector ATPase complex	None	Extended
MF	GO:0016874	ligase activity	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
BP	GO:0018130	heterocycle biosynthetic process	None	Extended
BP	GO:0019438	aromatic compound biosynthetic process	None	Extended
BP	GO:0019637	organophosphate metabolic process	None	Extended
BP	GO:0019693	ribose phosphate metabolic process	None	Extended
MF	GO:0019829	ATPase-coupled cation transmembrane transporter activity	None	Extended
MF	GO:0022803	passive transmembrane transporter activity	None	Extended
MF	GO:0022804	active transmembrane transporter activity	None	Extended
MF	GO:0022853	active ion transmembrane transporter activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
MF	GO:0022890	inorganic cation transmembrane transporter activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
CC	GO:0031090	organelle membrane	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
CC	GO:0033178	proton-transporting two-sector ATPase complex, catalytic domain	None	Extended
CC	GO:0034357	photosynthetic membrane	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034654	nucleobase-containing compound biosynthetic process	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
CC	GO:0042170	plastid membrane	None	Extended
MF	GO:0042625	ATPase-coupled ion transmembrane transporter activity	None	Extended
MF	GO:0042626	ATPase-coupled transmembrane transporter activity	None	Extended
CC	GO:0042651	thylakoid membrane	None	Extended
BP	GO:0042776	proton motive force-driven mitochondrial ATP synthesis	IEA	AHRD
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
MF	GO:0044769	ATPase activity, coupled to transmembrane movement of ions, rotational mechanism	None	Extended
CC	GO:0045259	proton-transporting ATP synthase complex	None	Extended
CC	GO:0045261	proton-transporting ATP synthase complex, catalytic core F(1)	IEA	AHRD
BP	GO:0046034	ATP metabolic process	None	Extended
BP	GO:0046390	ribose phosphate biosynthetic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
MF	GO:0046933	proton-transporting ATP synthase activity, rotational mechanism	IEA	AHRD
MF	GO:0046961	proton-transporting ATPase activity, rotational mechanism	IEA	AHRD
CC	GO:0055035	plastid thylakoid membrane	None	Extended
BP	GO:0055086	nucleobase-containing small molecule metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0072521	purine-containing compound metabolic process	None	Extended
BP	GO:0072522	purine-containing compound biosynthetic process	None	Extended
BP	GO:0090407	organophosphate biosynthetic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
CC	GO:0098796	membrane protein complex	None	Extended
CC	GO:0098798	mitochondrial protein-containing complex	None	Extended
CC	GO:0098800	inner mitochondrial membrane protein complex	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140657	ATP-dependent activity	None	Extended
BP	GO:1901135	carbohydrate derivative metabolic process	None	Extended
BP	GO:1901137	carbohydrate derivative biosynthetic process	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
BP	GO:1901293	nucleoside phosphate biosynthetic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901362	organic cyclic compound biosynthetic process	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0000960	regulation of mitochondrial RNA catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0000962	positive regulation of mitochondrial RNA catabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0003954	NADH dehydrogenase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0003955	NAD(P)H dehydrogenase (quinone) activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004096	catalase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004365	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004839	ubiquitin activating enzyme activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0005983	starch catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006091	generation of precursor metabolites and energy	IEP	Predict GO terms from Neighborhoods
BP	GO:0006983	ER overload response	IEP	Predict GO terms from Neighborhoods
BP	GO:0006984	ER-nucleus signaling pathway	IEP	Predict GO terms from Neighborhoods
MF	GO:0008137	NADH dehydrogenase (ubiquinone) activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0008194	UDP-glycosyltransferase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0008300	isoprenoid catabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0008641	ubiquitin-like modifier activating enzyme activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0009055	electron transfer activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0009579	thylakoid	IEP	Predict GO terms from Neighborhoods
BP	GO:0009697	salicylic acid biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009718	anthocyanin-containing compound biosynthetic process	IEP	Predict GO terms from Neighborhoods
CC	GO:0010287	plastoglobule	IEP	Predict GO terms from Neighborhoods
MF	GO:0010436	carotenoid dioxygenase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0010555	response to mannitol	IEP	Predict GO terms from Neighborhoods
MF	GO:0015186	L-glutamine transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0015453	oxidoreduction-driven active transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0015988	energy coupled proton transmembrane transport, against electrochemical gradient	IEP	Predict GO terms from Neighborhoods
BP	GO:0015990	electron transport coupled proton transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0016052	carbohydrate catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0016107	sesquiterpenoid catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0016110	tetraterpenoid catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0016115	terpenoid catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0016118	carotenoid catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0016119	carotene metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0016120	carotene biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0016121	carotene catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0016122	xanthophyll metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0016124	xanthophyll catabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0016160	amylase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0016161	beta-amylase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0016239	positive regulation of macroautophagy	IEP	Predict GO terms from Neighborhoods
MF	GO:0016491	oxidoreductase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0016651	oxidoreductase activity, acting on NAD(P)H	IEP	Predict GO terms from Neighborhoods
MF	GO:0016655	oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor	IEP	Predict GO terms from Neighborhoods
MF	GO:0016752	sinapoyltransferase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0016753	O-sinapoyltransferase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0016754	sinapoylglucose-malate O-sinapoyltransferase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0016763	pentosyltransferase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0017014	protein nitrosylation	IEP	Predict GO terms from Neighborhoods
MF	GO:0017046	peptide hormone binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0019253	reductive pentose-phosphate cycle	IEP	Predict GO terms from Neighborhoods
BP	GO:0019684	photosynthesis, light reaction	IEP	Predict GO terms from Neighborhoods
BP	GO:0019685	photosynthesis, dark reaction	IEP	Predict GO terms from Neighborhoods
MF	GO:0019777	Atg12 transferase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0032973	amino acid export across plasma membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0033059	cellular pigmentation	IEP	Predict GO terms from Neighborhoods
CC	GO:0033177	proton-transporting two-sector ATPase complex, proton-transporting domain	IEP	Predict GO terms from Neighborhoods
BP	GO:0033240	positive regulation of cellular amine metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0033483	gas homeostasis	IEP	Predict GO terms from Neighborhoods
BP	GO:0033484	nitric oxide homeostasis	IEP	Predict GO terms from Neighborhoods
MF	GO:0033838	flavonol-3-O-glucoside glucosyltransferase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0034639	L-amino acid efflux transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0035251	UDP-glucosyltransferase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0035252	UDP-xylosyltransferase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0042285	xylosyltransferase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0042440	pigment metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0043290	apocarotenoid catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0043473	pigmentation	IEP	Predict GO terms from Neighborhoods
BP	GO:0043482	cellular pigment accumulation	IEP	Predict GO terms from Neighborhoods
MF	GO:0043891	glyceraldehyde-3-phosphate dehydrogenase (NAD(P)+) (phosphorylating) activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0044090	positive regulation of vacuole organization	IEP	Predict GO terms from Neighborhoods
CC	GO:0045263	proton-transporting ATP synthase complex, coupling factor F(o)	IEP	Predict GO terms from Neighborhoods
MF	GO:0045549	9-cis-epoxycarotenoid dioxygenase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0045764	positive regulation of cellular amino acid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0046148	pigment biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0046247	terpene catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0046283	anthocyanin-containing compound metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0046345	abscisic acid catabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0046527	glucosyltransferase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0047100	glyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating) activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0047230	flavonol-3-O-glucoside L-rhamnosyltransferase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0048038	quinone binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0050136	NADH dehydrogenase (quinone) activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0050665	hydrogen peroxide biosynthetic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0051427	hormone receptor binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0051428	peptide hormone receptor binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0051566	anthocyanidin-3-glucoside rhamnosyltransferase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0060866	leaf abscission	IEP	Predict GO terms from Neighborhoods
MF	GO:0061651	Atg12 conjugating enzyme activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0062150	amorpha-4,11-diene 12-monooxygenase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0071368	cellular response to cytokinin stimulus	IEP	Predict GO terms from Neighborhoods
BP	GO:0071395	cellular response to jasmonic acid stimulus	IEP	Predict GO terms from Neighborhoods
BP	GO:0071398	cellular response to fatty acid	IEP	Predict GO terms from Neighborhoods
MF	GO:0080045	quercetin 3'-O-glucosyltransferase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0090358	positive regulation of tryptophan metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0090548	response to nitrate starvation	IEP	Predict GO terms from Neighborhoods
BP	GO:0090549	response to carbon starvation	IEP	Predict GO terms from Neighborhoods
MF	GO:0102229	amylopectin maltohydrolase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0120253	hydrocarbon catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0120256	olefinic compound catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1901038	cyanidin 3-O-glucoside metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1901333	positive regulation of lateral root development	IEP	Predict GO terms from Neighborhoods
BP	GO:1901804	beta-glucoside metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1903409	reactive oxygen species biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1905637	regulation of mitochondrial mRNA catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1905639	positive regulation of mitochondrial mRNA catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:2000786	positive regulation of autophagosome assembly	IEP	Predict GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR000194	ATPase_F1/V1/A1_a/bsu_nucl-bd	24	218
IPR027417	P-loop_NTPase	3	217

External Links

No external refs found!

SOLTUB.AGRIA.G00000040430

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation