Coexpression cluster: Cluster_127 (HCCA Clusters (HRR 50 & PCC 0.5))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0010421 hydrogen peroxide-mediated programmed cell death 12.24% (6/49) 7.18 0.0 0.0
GO:0036474 cell death in response to hydrogen peroxide 12.24% (6/49) 7.18 0.0 0.0
GO:0036473 cell death in response to oxidative stress 12.24% (6/49) 6.55 0.0 0.0
GO:0097468 programmed cell death in response to reactive oxygen species 12.24% (6/49) 6.55 0.0 0.0
GO:0106145 scopoletin 8-hydroxylase activity 10.2% (5/49) 6.79 0.0 0.0
GO:0106147 fraxetin biosynthesis 10.2% (5/49) 6.79 0.0 0.0
GO:1990641 response to iron ion starvation 12.24% (6/49) 5.82 0.0 0.0
GO:0009805 coumarin biosynthetic process 12.24% (6/49) 5.46 0.0 1e-06
GO:0009804 coumarin metabolic process 12.24% (6/49) 5.34 0.0 1e-06
GO:0016706 2-oxoglutarate-dependent dioxygenase activity 12.24% (6/49) 4.03 2e-06 0.000138
GO:0002238 response to molecule of fungal origin 14.29% (7/49) 3.53 2e-06 0.000153
GO:0010039 response to iron ion 10.2% (5/49) 4.57 2e-06 0.000161
GO:0010224 response to UV-B 12.24% (6/49) 3.73 6e-06 0.00036
GO:0051213 dioxygenase activity 12.24% (6/49) 3.66 8e-06 0.00044
GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen 14.29% (7/49) 3.13 1.4e-05 0.000733
GO:0002239 response to oomycetes 12.24% (6/49) 3.42 2e-05 0.000991
GO:0005753 mitochondrial proton-transporting ATP synthase complex 4.08% (2/49) 8.05 2.3e-05 0.001063
GO:0045259 proton-transporting ATP synthase complex 4.08% (2/49) 7.64 4.3e-05 0.001871
GO:0004497 monooxygenase activity 14.29% (7/49) 2.86 4.7e-05 0.001937
GO:0009698 phenylpropanoid metabolic process 16.33% (8/49) 2.53 6.5e-05 0.002564
GO:0016491 oxidoreductase activity 24.49% (12/49) 1.87 7.1e-05 0.002643
GO:0042594 response to starvation 14.29% (7/49) 2.73 8.1e-05 0.002885
GO:0042776 proton motive force-driven mitochondrial ATP synthesis 4.08% (2/49) 7.05 0.000101 0.00344
GO:0045261 proton-transporting ATP synthase complex, catalytic core F(1) 4.08% (2/49) 6.94 0.000119 0.003893
GO:0009699 phenylpropanoid biosynthetic process 14.29% (7/49) 2.55 0.000176 0.005536
GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen 14.29% (7/49) 2.5 0.000217 0.006309
GO:0009411 response to UV 12.24% (6/49) 2.8 0.000215 0.006505
GO:0019438 aromatic compound biosynthetic process 20.41% (10/49) 1.8 0.000459 0.012001
GO:0015252 proton channel activity 4.08% (2/49) 6.0 0.000453 0.012273
GO:0046933 proton-transporting ATP synthase activity, rotational mechanism 4.08% (2/49) 6.0 0.000453 0.012273
GO:0033178 proton-transporting two-sector ATPase complex, catalytic domain 4.08% (2/49) 5.94 0.000491 0.012428
GO:0004029 aldehyde dehydrogenase (NAD+) activity 4.08% (2/49) 5.83 0.00057 0.013158
GO:0016469 proton-transporting two-sector ATPase complex 4.08% (2/49) 5.83 0.00057 0.013158
GO:0012501 programmed cell death 12.24% (6/49) 2.55 0.000539 0.013233
GO:0009696 salicylic acid metabolic process 6.12% (3/49) 4.04 0.000813 0.016793
GO:0044769 ATPase activity, coupled to transmembrane movement of ions, rotational mechanism 4.08% (2/49) 5.6 0.000793 0.016822
GO:0046961 proton-transporting ATPase activity, rotational mechanism 4.08% (2/49) 5.6 0.000793 0.016822
GO:0042625 ATPase-coupled ion transmembrane transporter activity 4.08% (2/49) 5.55 0.000842 0.016943
GO:1901616 organic hydroxy compound catabolic process 6.12% (3/49) 4.07 0.000765 0.017162
GO:0031667 response to nutrient levels 14.29% (7/49) 2.15 0.00091 0.01743
GO:0004030 aldehyde dehydrogenase [NAD(P)+] activity 4.08% (2/49) 5.51 0.000892 0.017507
GO:0015986 proton motive force-driven ATP synthesis 4.08% (2/49) 5.47 0.000944 0.01764
GO:0046034 ATP metabolic process 6.12% (3/49) 3.87 0.00116 0.021168
GO:0008219 cell death 12.24% (6/49) 2.31 0.001248 0.022263
GO:0046244 salicylic acid catabolic process 4.08% (2/49) 5.25 0.001284 0.022393
GO:0009205 purine ribonucleoside triphosphate metabolic process 6.12% (3/49) 3.77 0.001397 0.023839
GO:0018130 heterocycle biosynthetic process 16.33% (8/49) 1.85 0.001506 0.025161
GO:0009144 purine nucleoside triphosphate metabolic process 6.12% (3/49) 3.71 0.001587 0.025961
GO:0006754 ATP biosynthetic process 4.08% (2/49) 5.03 0.001744 0.027373
GO:0009678 pyrophosphate hydrolysis-driven proton transmembrane transporter activity 4.08% (2/49) 5.0 0.001815 0.027395
GO:0009199 ribonucleoside triphosphate metabolic process 6.12% (3/49) 3.67 0.001714 0.027465
GO:0009813 flavonoid biosynthetic process 8.16% (4/49) 2.95 0.001788 0.027522
GO:0072329 monocarboxylic acid catabolic process 6.12% (3/49) 3.62 0.001902 0.027657
GO:0044550 secondary metabolite biosynthetic process 14.29% (7/49) 1.97 0.001868 0.027671
GO:1901362 organic cyclic compound biosynthetic process 20.41% (10/49) 1.52 0.002033 0.029015
GO:0019748 secondary metabolic process 16.33% (8/49) 1.75 0.002334 0.032139
GO:0009991 response to extracellular stimulus 14.29% (7/49) 1.92 0.002332 0.032693
GO:0019336 phenol-containing compound catabolic process 4.08% (2/49) 4.76 0.002517 0.032925
GO:0009206 purine ribonucleoside triphosphate biosynthetic process 4.08% (2/49) 4.78 0.002433 0.032932
GO:0009141 nucleoside triphosphate metabolic process 6.12% (3/49) 3.48 0.002509 0.033386
GO:0009145 purine nucleoside triphosphate biosynthetic process 4.08% (2/49) 4.73 0.002601 0.033475
GO:0003954 NADH dehydrogenase activity 4.08% (2/49) 4.57 0.003231 0.040262
GO:1901615 organic hydroxy compound metabolic process 12.24% (6/49) 2.04 0.003187 0.040356
GO:0009201 ribonucleoside triphosphate biosynthetic process 4.08% (2/49) 4.49 0.00362 0.044403
GO:0042170 plastid membrane 10.2% (5/49) 2.25 0.003954 0.047754
GO:0009812 flavonoid metabolic process 8.16% (4/49) 2.61 0.0042 0.049953
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_144 0.008 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_175 0.01 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_178 0.01 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_195 0.008 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_214 0.01 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_264 0.007 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_321 0.02 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_10 0.01 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_14 0.026 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_33 0.008 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_59 0.009 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_66 0.01 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_67 0.008 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_70 0.008 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_79 0.008 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_92 0.012 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_99 0.008 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_109 0.042 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_111 0.01 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_125 0.01 Orthogroups with 8 Potato genotypes Compare
Sequences (49) (download table)

InterPro Domains

GO Terms

Family Terms