SOLTUB.AGRIA.G00000040507


Description : NAD(P)H-quinone oxidoreductase chain 4, chloroplastic


Gene families : OG_02_0027295 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000040507
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_14

Target Alias Description ECC score Gene Family Method Actions
SOLTUB.AGRIA.G00000044345 No alias NAD(P)H-quinone oxidoreductase chain 4, chloroplastic 0.08 Orthogroups with 8 Potato genotypes
SOLTUB.AGRIA.G00000044346 No alias NAD(P)H-quinone oxidoreductase subunit 4L, chloroplastic 0.08 Orthogroups with 8 Potato genotypes
SOLTUB.AGRIA.G00000044345 No alias NAD(P)H-quinone oxidoreductase chain 4, chloroplastic 0.08 Orthogroups with 8 Potato genotypes
SOLTUB.AGRIA.G00000044346 No alias NAD(P)H-quinone oxidoreductase subunit 4L, chloroplastic 0.08 Orthogroups with 8 Potato genotypes
SOLTUB.AGRIA.G00000044345 No alias NAD(P)H-quinone oxidoreductase chain 4, chloroplastic 0.08 Orthogroups with 8 Potato genotypes
SOLTUB.AGRIA.G00000044346 No alias NAD(P)H-quinone oxidoreductase subunit 4L, chloroplastic 0.08 Orthogroups with 8 Potato genotypes

Type GO Term Name Evidence Source
MF GO:0008137 NADH dehydrogenase (ubiquinone) activity IEA AHRD
CC GO:0009535 chloroplast thylakoid membrane IEA AHRD
BP GO:0015990 electron transport coupled proton transport IEA AHRD
CC GO:0016021 integral component of membrane IEA AHRD
BP GO:0042773 ATP synthesis coupled electron transport IEA AHRD
MF GO:0048039 ubiquinone binding IEA AHRD
Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP Predict GO terms from Neighborhoods
MF GO:0003729 mRNA binding IEP Predict GO terms from Neighborhoods
MF GO:0004176 ATP-dependent peptidase activity IEP Predict GO terms from Neighborhoods
MF GO:0005506 iron ion binding IEP Predict GO terms from Neighborhoods
CC GO:0005743 mitochondrial inner membrane IEP Predict GO terms from Neighborhoods
CC GO:0009368 endopeptidase Clp complex IEP Predict GO terms from Neighborhoods
CC GO:0009521 photosystem IEP Predict GO terms from Neighborhoods
CC GO:0009522 photosystem I IEP Predict GO terms from Neighborhoods
CC GO:0009523 photosystem II IEP Predict GO terms from Neighborhoods
CC GO:0009533 chloroplast stromal thylakoid IEP Predict GO terms from Neighborhoods
CC GO:0009539 photosystem II reaction center IEP Predict GO terms from Neighborhoods
BP GO:0009635 response to herbicide IEP Predict GO terms from Neighborhoods
BP GO:0009636 response to toxic substance IEP Predict GO terms from Neighborhoods
BP GO:0009767 photosynthetic electron transport chain IEP Predict GO terms from Neighborhoods
BP GO:0009772 photosynthetic electron transport in photosystem II IEP Predict GO terms from Neighborhoods
BP GO:0009773 photosynthetic electron transport in photosystem I IEP Predict GO terms from Neighborhoods
BP GO:0010207 photosystem II assembly IEP Predict GO terms from Neighborhoods
MF GO:0010242 oxygen evolving activity IEP Predict GO terms from Neighborhoods
BP GO:0010395 rhamnogalacturonan I metabolic process IEP Predict GO terms from Neighborhoods
MF GO:0015252 proton channel activity IEP Predict GO terms from Neighborhoods
BP GO:0015979 photosynthesis IEP Predict GO terms from Neighborhoods
BP GO:0015986 proton motive force-driven ATP synthesis IEP Predict GO terms from Neighborhoods
MF GO:0016168 chlorophyll binding IEP Predict GO terms from Neighborhoods
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP Predict GO terms from Neighborhoods
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP Predict GO terms from Neighborhoods
BP GO:0018023 peptidyl-lysine trimethylation IEP Predict GO terms from Neighborhoods
BP GO:0018026 peptidyl-lysine monomethylation IEP Predict GO terms from Neighborhoods
BP GO:0018298 obsolete protein-chromophore linkage IEP Predict GO terms from Neighborhoods
BP GO:0019684 photosynthesis, light reaction IEP Predict GO terms from Neighborhoods
MF GO:0030785 [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity IEP Predict GO terms from Neighborhoods
CC GO:0031966 mitochondrial membrane IEP Predict GO terms from Neighborhoods
CC GO:0032991 protein-containing complex IEP Predict GO terms from Neighborhoods
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP Predict GO terms from Neighborhoods
MF GO:0043169 cation binding IEP Predict GO terms from Neighborhoods
MF GO:0045156 electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity IEP Predict GO terms from Neighborhoods
CC GO:0045263 proton-transporting ATP synthase complex, coupling factor F(o) IEP Predict GO terms from Neighborhoods
MF GO:0046872 metal ion binding IEP Predict GO terms from Neighborhoods
MF GO:0046906 tetrapyrrole binding IEP Predict GO terms from Neighborhoods
MF GO:0046933 proton-transporting ATP synthase activity, rotational mechanism IEP Predict GO terms from Neighborhoods
MF GO:0051536 iron-sulfur cluster binding IEP Predict GO terms from Neighborhoods
MF GO:0051539 4 iron, 4 sulfur cluster binding IEP Predict GO terms from Neighborhoods
MF GO:0051540 metal cluster binding IEP Predict GO terms from Neighborhoods
CC GO:0070469 respirasome IEP Predict GO terms from Neighborhoods
MF GO:0080016 (-)-E-beta-caryophyllene synthase activity IEP Predict GO terms from Neighborhoods
BP GO:0080157 regulation of plant-type cell wall organization or biogenesis IEP Predict GO terms from Neighborhoods
CC GO:0098796 membrane protein complex IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR001750 ND/Mrp_mem 147 310
IPR010227 NADH_Q_OxRdtase_chainM/4 7 309
No external refs found!