SOLTUB.AGRIA.G00000040508

Description : NAD(P)H-quinone oxidoreductase subunit 4L, chloroplastic

Gene families : OG_02_0027295 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000040508
Cluster	HCCA Clusters (HRR 50 & PCC 0.5): Cluster_14

Target	Alias	Description	ECC score	Gene Family Method
SOLTUB.AGRIA.G00000044345	No alias	NAD(P)H-quinone oxidoreductase chain 4, chloroplastic	0.02	Orthogroups with 8 Potato genotypes
SOLTUB.AGRIA.G00000044346	No alias	NAD(P)H-quinone oxidoreductase subunit 4L, chloroplastic	0.02	Orthogroups with 8 Potato genotypes
SOLTUB.AGRIA.G00000044345	No alias	NAD(P)H-quinone oxidoreductase chain 4, chloroplastic	0.02	Orthogroups with 8 Potato genotypes
SOLTUB.AGRIA.G00000044346	No alias	NAD(P)H-quinone oxidoreductase subunit 4L, chloroplastic	0.02	Orthogroups with 8 Potato genotypes
SOLTUB.AGRIA.G00000044345	No alias	NAD(P)H-quinone oxidoreductase chain 4, chloroplastic	0.02	Orthogroups with 8 Potato genotypes
SOLTUB.AGRIA.G00000044346	No alias	NAD(P)H-quinone oxidoreductase subunit 4L, chloroplastic	0.02	Orthogroups with 8 Potato genotypes

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	None	Extended
MF	GO:0003729	mRNA binding	IEA	AHRD
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006091	generation of precursor metabolites and energy	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0009055	electron transfer activity	IEA	AHRD
CC	GO:0009521	photosystem	None	Extended
CC	GO:0009522	photosystem I	IEA	AHRD
CC	GO:0009535	chloroplast thylakoid membrane	IEA	AHRD
BP	GO:0009767	photosynthetic electron transport chain	None	Extended
BP	GO:0009773	photosynthetic electron transport in photosystem I	IEA	AHRD
BP	GO:0009987	cellular process	None	Extended
CC	GO:0016020	membrane	None	Extended
MF	GO:0016491	oxidoreductase activity	None	Extended
BP	GO:0022900	electron transport chain	None	Extended
CC	GO:0031090	organelle membrane	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
CC	GO:0034357	photosynthetic membrane	None	Extended
CC	GO:0042170	plastid membrane	None	Extended
CC	GO:0042651	thylakoid membrane	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
MF	GO:0046872	metal ion binding	IEA	AHRD
MF	GO:0051536	iron-sulfur cluster binding	None	Extended
MF	GO:0051539	4 iron, 4 sulfur cluster binding	IEA	AHRD
MF	GO:0051540	metal cluster binding	None	Extended
CC	GO:0055035	plastid thylakoid membrane	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0098796	membrane protein complex	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0003954	NADH dehydrogenase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0003955	NAD(P)H dehydrogenase (quinone) activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004176	ATP-dependent peptidase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0006004	fucose metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006754	ATP biosynthetic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0008137	NADH dehydrogenase (ubiquinone) activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0009142	nucleoside triphosphate biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009145	purine nucleoside triphosphate biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009201	ribonucleoside triphosphate biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009206	purine ribonucleoside triphosphate biosynthetic process	IEP	Predict GO terms from Neighborhoods
CC	GO:0009368	endopeptidase Clp complex	IEP	Predict GO terms from Neighborhoods
CC	GO:0009523	photosystem II	IEP	Predict GO terms from Neighborhoods
BP	GO:0009772	photosynthetic electron transport in photosystem II	IEP	Predict GO terms from Neighborhoods
BP	GO:0010207	photosystem II assembly	IEP	Predict GO terms from Neighborhoods
MF	GO:0010334	sesquiterpene synthase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0010395	rhamnogalacturonan I metabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0015252	proton channel activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0015399	primary active transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0015453	oxidoreduction-driven active transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0015986	proton motive force-driven ATP synthesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0015988	energy coupled proton transmembrane transport, against electrochemical gradient	IEP	Predict GO terms from Neighborhoods
BP	GO:0015990	electron transport coupled proton transport	IEP	Predict GO terms from Neighborhoods
CC	GO:0016021	integral component of membrane	IEP	Predict GO terms from Neighborhoods
MF	GO:0016168	chlorophyll binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0016651	oxidoreductase activity, acting on NAD(P)H	IEP	Predict GO terms from Neighborhoods
MF	GO:0016655	oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor	IEP	Predict GO terms from Neighborhoods
BP	GO:0018023	peptidyl-lysine trimethylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0018026	peptidyl-lysine monomethylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0018298	obsolete protein-chromophore linkage	IEP	Predict GO terms from Neighborhoods
BP	GO:0019684	photosynthesis, light reaction	IEP	Predict GO terms from Neighborhoods
BP	GO:0022904	respiratory electron transport chain	IEP	Predict GO terms from Neighborhoods
MF	GO:0030785	[ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0031224	intrinsic component of membrane	IEP	Predict GO terms from Neighborhoods
CC	GO:0033177	proton-transporting two-sector ATPase complex, proton-transporting domain	IEP	Predict GO terms from Neighborhoods
BP	GO:0042773	ATP synthesis coupled electron transport	IEP	Predict GO terms from Neighborhoods
MF	GO:0045156	electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0045263	proton-transporting ATP synthase complex, coupling factor F(o)	IEP	Predict GO terms from Neighborhoods
BP	GO:0045338	farnesyl diphosphate metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0045339	farnesyl diphosphate catabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0046933	proton-transporting ATP synthase activity, rotational mechanism	IEP	Predict GO terms from Neighborhoods
MF	GO:0047461	(+)-delta-cadinene synthase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0048038	quinone binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0048039	ubiquinone binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0048442	sepal development	IEP	Predict GO terms from Neighborhoods
BP	GO:0048480	stigma development	IEP	Predict GO terms from Neighborhoods
MF	GO:0050136	NADH dehydrogenase (quinone) activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0051117	ATPase binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0080016	(-)-E-beta-caryophyllene synthase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0080157	regulation of plant-type cell wall organization or biogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0090377	seed trichome initiation	IEP	Predict GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR039428	NUOK/Mnh_C1-like	10	99
IPR017491	PSI_PsaC	117	195

External Links

No external refs found!

SOLTUB.AGRIA.G00000040508

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation