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  5. SOLTUB.AGRIA.G00000000382

SOLTUB.AGRIA.G00000000382


Description : splicing factor 3A subunit


Gene families : OG_02_0011863 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000000382
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_26


Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000902 cell morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0001678 cellular glucose homeostasis IEP Predict GO terms from Neighborhoods
BP GO:0001752 compound eye photoreceptor fate commitment IEP Predict GO terms from Neighborhoods
MF GO:0004664 prephenate dehydratase activity IEP Predict GO terms from Neighborhoods
MF GO:0005215 transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0005216 ion channel activity IEP Predict GO terms from Neighborhoods
MF GO:0005217 intracellular ligand-gated ion channel activity IEP Predict GO terms from Neighborhoods
MF GO:0005221 intracellular cyclic nucleotide activated cation channel activity IEP Predict GO terms from Neighborhoods
MF GO:0005223 intracellular cGMP-activated cation channel activity IEP Predict GO terms from Neighborhoods
MF GO:0005244 voltage-gated ion channel activity IEP Predict GO terms from Neighborhoods
MF GO:0005249 voltage-gated potassium channel activity IEP Predict GO terms from Neighborhoods
MF GO:0005261 cation channel activity IEP Predict GO terms from Neighborhoods
MF GO:0005262 calcium channel activity IEP Predict GO terms from Neighborhoods
MF GO:0005267 potassium channel activity IEP Predict GO terms from Neighborhoods
MF GO:0005351 carbohydrate:proton symporter activity IEP Predict GO terms from Neighborhoods
MF GO:0005354 galactose transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0005355 glucose transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0005356 glucose:proton symporter activity IEP Predict GO terms from Neighborhoods
MF GO:0005358 high-affinity glucose:proton symporter activity IEP Predict GO terms from Neighborhoods
MF GO:0005402 carbohydrate:cation symporter activity IEP Predict GO terms from Neighborhoods
BP GO:0006558 L-phenylalanine metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006570 tyrosine metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006571 tyrosine biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0006813 potassium ion transport IEP Predict GO terms from Neighborhoods
BP GO:0006874 cellular calcium ion homeostasis IEP Predict GO terms from Neighborhoods
BP GO:0007465 R7 cell fate commitment IEP Predict GO terms from Neighborhoods
BP GO:0007623 circadian rhythm IEP Predict GO terms from Neighborhoods
MF GO:0008324 cation transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0008506 sucrose:proton symporter activity IEP Predict GO terms from Neighborhoods
MF GO:0008515 sucrose transmembrane transporter activity IEP Predict GO terms from Neighborhoods
BP GO:0008643 carbohydrate transport IEP Predict GO terms from Neighborhoods
BP GO:0008645 hexose transmembrane transport IEP Predict GO terms from Neighborhoods
BP GO:0009072 aromatic amino acid family metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009073 aromatic amino acid family biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009094 L-phenylalanine biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009095 aromatic amino acid family biosynthetic process, prephenate pathway IEP Predict GO terms from Neighborhoods
BP GO:0009645 response to low light intensity stimulus IEP Predict GO terms from Neighborhoods
MF GO:0009669 sucrose:cation symporter activity IEP Predict GO terms from Neighborhoods
MF GO:0009679 hexose:proton symporter activity IEP Predict GO terms from Neighborhoods
BP GO:0009749 response to glucose IEP Predict GO terms from Neighborhoods
BP GO:0009877 nodulation IEP Predict GO terms from Neighborhoods
BP GO:0010014 meristem initiation IEP Predict GO terms from Neighborhoods
BP GO:0010058 regulation of atrichoblast fate specification IEP Predict GO terms from Neighborhoods
BP GO:0010059 positive regulation of atrichoblast fate specification IEP Predict GO terms from Neighborhoods
BP GO:0010061 regulation of trichoblast fate specification IEP Predict GO terms from Neighborhoods
BP GO:0010063 positive regulation of trichoblast fate specification IEP Predict GO terms from Neighborhoods
BP GO:0010071 root meristem specification IEP Predict GO terms from Neighborhoods
BP GO:0010244 response to low fluence blue light stimulus by blue low-fluence system IEP Predict GO terms from Neighborhoods
BP GO:0010305 leaf vascular tissue pattern formation IEP Predict GO terms from Neighborhoods
BP GO:0010453 regulation of cell fate commitment IEP Predict GO terms from Neighborhoods
BP GO:0010455 positive regulation of cell fate commitment IEP Predict GO terms from Neighborhoods
CC GO:0012505 endomembrane system IEP Predict GO terms from Neighborhoods
MF GO:0015075 ion transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0015079 potassium ion transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0015085 calcium ion transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0015144 carbohydrate transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0015145 monosaccharide transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0015146 pentose transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0015149 hexose transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0015154 disaccharide transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0015157 oligosaccharide transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0015276 ligand-gated ion channel activity IEP Predict GO terms from Neighborhoods
MF GO:0015293 symporter activity IEP Predict GO terms from Neighborhoods
MF GO:0015294 solute:cation symporter activity IEP Predict GO terms from Neighborhoods
MF GO:0015295 solute:proton symporter activity IEP Predict GO terms from Neighborhoods
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0015578 mannose transmembrane transporter activity IEP Predict GO terms from Neighborhoods
BP GO:0015749 monosaccharide transmembrane transport IEP Predict GO terms from Neighborhoods
BP GO:0015750 pentose transmembrane transport IEP Predict GO terms from Neighborhoods
BP GO:0015751 arabinose transmembrane transport IEP Predict GO terms from Neighborhoods
BP GO:0015757 galactose transmembrane transport IEP Predict GO terms from Neighborhoods
BP GO:0015761 mannose transmembrane transport IEP Predict GO terms from Neighborhoods
BP GO:0015766 disaccharide transport IEP Predict GO terms from Neighborhoods
BP GO:0015770 sucrose transport IEP Predict GO terms from Neighborhoods
BP GO:0015772 oligosaccharide transport IEP Predict GO terms from Neighborhoods
CC GO:0016021 integral component of membrane IEP Predict GO terms from Neighborhoods
MF GO:0016836 hydro-lyase activity IEP Predict GO terms from Neighborhoods
BP GO:0019725 cellular homeostasis IEP Predict GO terms from Neighborhoods
MF GO:0022832 voltage-gated channel activity IEP Predict GO terms from Neighborhoods
MF GO:0022834 ligand-gated channel activity IEP Predict GO terms from Neighborhoods
MF GO:0022836 gated channel activity IEP Predict GO terms from Neighborhoods
MF GO:0022843 voltage-gated cation channel activity IEP Predict GO terms from Neighborhoods
MF GO:0022857 transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0022890 inorganic cation transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0030551 cyclic nucleotide binding IEP Predict GO terms from Neighborhoods
MF GO:0030552 cAMP binding IEP Predict GO terms from Neighborhoods
MF GO:0030553 cGMP binding IEP Predict GO terms from Neighborhoods
CC GO:0031224 intrinsic component of membrane IEP Predict GO terms from Neighborhoods
CC GO:0031226 intrinsic component of plasma membrane IEP Predict GO terms from Neighborhoods
BP GO:0032268 regulation of cellular protein metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0033500 carbohydrate homeostasis IEP Predict GO terms from Neighborhoods
BP GO:0034219 carbohydrate transmembrane transport IEP Predict GO terms from Neighborhoods
CC GO:0035618 root hair IEP Predict GO terms from Neighborhoods
BP GO:0036377 arbuscular mycorrhizal association IEP Predict GO terms from Neighborhoods
BP GO:0042593 glucose homeostasis IEP Predict GO terms from Neighborhoods
BP GO:0042659 regulation of cell fate specification IEP Predict GO terms from Neighborhoods
BP GO:0042660 positive regulation of cell fate specification IEP Predict GO terms from Neighborhoods
BP GO:0042706 eye photoreceptor cell fate commitment IEP Predict GO terms from Neighborhoods
BP GO:0042882 L-arabinose transmembrane transport IEP Predict GO terms from Neighborhoods
MF GO:0042900 arabinose transmembrane transporter activity IEP Predict GO terms from Neighborhoods
CC GO:0042995 cell projection IEP Predict GO terms from Neighborhoods
BP GO:0043065 positive regulation of apoptotic process IEP Predict GO terms from Neighborhoods
BP GO:0043410 positive regulation of MAPK cascade IEP Predict GO terms from Neighborhoods
MF GO:0043855 cyclic nucleotide-gated ion channel activity IEP Predict GO terms from Neighborhoods
BP GO:0044088 regulation of vacuole organization IEP Predict GO terms from Neighborhoods
MF GO:0044325 transmembrane transporter binding IEP Predict GO terms from Neighborhoods
BP GO:0045165 cell fate commitment IEP Predict GO terms from Neighborhoods
BP GO:0046552 photoreceptor cell fate commitment IEP Predict GO terms from Neighborhoods
MF GO:0047769 arogenate dehydratase activity IEP Predict GO terms from Neighborhoods
BP GO:0048481 plant ovule development IEP Predict GO terms from Neighborhoods
BP GO:0048511 rhythmic process IEP Predict GO terms from Neighborhoods
BP GO:0048663 neuron fate commitment IEP Predict GO terms from Neighborhoods
MF GO:0051119 sugar transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0055055 D-glucose:proton symporter activity IEP Predict GO terms from Neighborhoods
MF GO:0055056 D-glucose transmembrane transporter activity IEP Predict GO terms from Neighborhoods
BP GO:0055074 calcium ion homeostasis IEP Predict GO terms from Neighborhoods
BP GO:0055082 cellular chemical homeostasis IEP Predict GO terms from Neighborhoods
BP GO:0055085 transmembrane transport IEP Predict GO terms from Neighborhoods
BP GO:0071310 cellular response to organic substance IEP Predict GO terms from Neighborhoods
BP GO:0071322 cellular response to carbohydrate stimulus IEP Predict GO terms from Neighborhoods
BP GO:0071323 cellular response to chitin IEP Predict GO terms from Neighborhoods
BP GO:0071326 cellular response to monosaccharide stimulus IEP Predict GO terms from Neighborhoods
BP GO:0071331 cellular response to hexose stimulus IEP Predict GO terms from Neighborhoods
BP GO:0071333 cellular response to glucose stimulus IEP Predict GO terms from Neighborhoods
BP GO:0071805 potassium ion transmembrane transport IEP Predict GO terms from Neighborhoods
BP GO:0072503 cellular divalent inorganic cation homeostasis IEP Predict GO terms from Neighborhoods
BP GO:0072507 divalent inorganic cation homeostasis IEP Predict GO terms from Neighborhoods
BP GO:0080148 negative regulation of response to water deprivation IEP Predict GO terms from Neighborhoods
CC GO:0090406 pollen tube IEP Predict GO terms from Neighborhoods
BP GO:0090421 embryonic meristem initiation IEP Predict GO terms from Neighborhoods
MF GO:0099094 ligand-gated cation channel activity IEP Predict GO terms from Neighborhoods
CC GO:0120025 plasma membrane bounded cell projection IEP Predict GO terms from Neighborhoods
BP GO:1900457 regulation of brassinosteroid mediated signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:1900459 positive regulation of brassinosteroid mediated signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:1901701 cellular response to oxygen-containing compound IEP Predict GO terms from Neighborhoods
BP GO:1902115 regulation of organelle assembly IEP Predict GO terms from Neighborhoods
BP GO:1902221 erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:1902223 erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1902584 positive regulation of response to water deprivation IEP Predict GO terms from Neighborhoods
BP GO:1903888 regulation of plant epidermal cell differentiation IEP Predict GO terms from Neighborhoods
BP GO:1903890 positive regulation of plant epidermal cell differentiation IEP Predict GO terms from Neighborhoods
BP GO:1904659 glucose transmembrane transport IEP Predict GO terms from Neighborhoods
BP GO:1905421 regulation of plant organ morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:2000067 regulation of root morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:2000785 regulation of autophagosome assembly IEP Predict GO terms from Neighborhoods
BP GO:2001233 regulation of apoptotic signaling pathway IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR019448 NT-C2 18 138
No external refs found!