SOLTUB.AGRIA.G00000041098

Description : Ubiquitin system component Cue protein

Gene families : OG_02_0023489 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000041098
Cluster	HCCA Clusters (HRR 50 & PCC 0.5): Cluster_147

Type	GO Term	Name	Evidence	Source
BP	GO:0000902	cell morphogenesis	None	Extended
BP	GO:0000904	cell morphogenesis involved in differentiation	None	Extended
BP	GO:0001558	regulation of cell growth	None	Extended
MF	GO:0001653	peptide receptor activity	IEA	AHRD
BP	GO:0002682	regulation of immune system process	None	Extended
BP	GO:0002831	regulation of response to biotic stimulus	None	Extended
BP	GO:0003002	regionalization	None	Extended
BP	GO:0003006	developmental process involved in reproduction	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004672	protein kinase activity	None	Extended
MF	GO:0004674	protein serine/threonine kinase activity	IEA	AHRD
MF	GO:0004888	transmembrane signaling receptor activity	None	Extended
MF	GO:0005102	signaling receptor binding	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005618	cell wall	IEA	AHRD
CC	GO:0005886	plasma membrane	IEA	AHRD
BP	GO:0006468	protein phosphorylation	IEA	AHRD
BP	GO:0006793	phosphorus metabolic process	None	Extended
BP	GO:0006796	phosphate-containing compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006811	ion transport	None	Extended
BP	GO:0006820	anion transport	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0007389	pattern specification process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008356	asymmetric cell division	IEA	AHRD
BP	GO:0009266	response to temperature stimulus	None	Extended
BP	GO:0009408	response to heat	None	Extended
CC	GO:0009507	chloroplast	IEA	AHRD
CC	GO:0009536	plastid	None	Extended
BP	GO:0009605	response to external stimulus	None	Extended
BP	GO:0009607	response to biotic stimulus	None	Extended
BP	GO:0009617	response to bacterium	IEA	AHRD
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009653	anatomical structure morphogenesis	None	Extended
BP	GO:0009719	response to endogenous stimulus	None	Extended
BP	GO:0009725	response to hormone	None	Extended
BP	GO:0009737	response to abscisic acid	None	Extended
BP	GO:0009791	post-embryonic development	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0009962	regulation of flavonoid biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0009991	response to extracellular stimulus	None	Extended
BP	GO:0010033	response to organic substance	None	Extended
BP	GO:0010051	xylem and phloem pattern formation	IEA	AHRD
BP	GO:0010074	maintenance of meristem identity	IEA	AHRD
BP	GO:0010075	regulation of meristem growth	None	Extended
BP	GO:0010082	regulation of root meristem growth	IEA	AHRD
BP	GO:0010090	trichome morphogenesis	IEA	AHRD
BP	GO:0010286	heat acclimation	IEA	AHRD
BP	GO:0010311	lateral root formation	IEA	AHRD
BP	GO:0010375	stomatal complex patterning	IEA	AHRD
BP	GO:0010376	stomatal complex formation	IEA	AHRD
BP	GO:0010769	regulation of cell morphogenesis involved in differentiation	None	Extended
CC	GO:0012505	endomembrane system	IEA	AHRD
BP	GO:0015698	inorganic anion transport	None	Extended
CC	GO:0016020	membrane	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
MF	GO:0016301	kinase activity	None	Extended
BP	GO:0016310	phosphorylation	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	None	Extended
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	None	Extended
MF	GO:0017046	peptide hormone binding	IEA	AHRD
MF	GO:0019199	transmembrane receptor protein kinase activity	IEA	AHRD
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0019827	stem cell population maintenance	None	Extended
BP	GO:0022414	reproductive process	None	Extended
BP	GO:0022603	regulation of anatomical structure morphogenesis	None	Extended
BP	GO:0022604	regulation of cell morphogenesis	None	Extended
CC	GO:0030312	external encapsulating structure	None	Extended
CC	GO:0031224	intrinsic component of membrane	None	Extended
CC	GO:0031225	anchored component of membrane	IEA	AHRD
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0031347	regulation of defense response	None	Extended
BP	GO:0031537	regulation of anthocyanin metabolic process	None	Extended
BP	GO:0031540	regulation of anthocyanin biosynthetic process	IEA	AHRD
BP	GO:0031667	response to nutrient levels	None	Extended
BP	GO:0032101	regulation of response to external stimulus	None	Extended
BP	GO:0032501	multicellular organismal process	None	Extended
BP	GO:0032502	developmental process	None	Extended
BP	GO:0032870	cellular response to hormone stimulus	None	Extended
MF	GO:0033218	amide binding	None	Extended
BP	GO:0033554	cellular response to stress	IEA	AHRD
MF	GO:0033612	receptor serine/threonine kinase binding	IEA	AHRD
BP	GO:0033993	response to lipid	None	Extended
BP	GO:0036211	protein modification process	None	Extended
MF	GO:0038023	signaling receptor activity	None	Extended
BP	GO:0040008	regulation of growth	None	Extended
BP	GO:0042221	response to chemical	None	Extended
MF	GO:0042277	peptide binding	None	Extended
MF	GO:0042562	hormone binding	None	Extended
BP	GO:0042594	response to starvation	None	Extended
MF	GO:0042802	identical protein binding	IEA	AHRD
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043207	response to external biotic stimulus	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0043455	regulation of secondary metabolic process	None	Extended
BP	GO:0044087	regulation of cellular component biogenesis	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044419	biological process involved in interspecies interaction between organisms	None	Extended
BP	GO:0045088	regulation of innate immune response	None	Extended
BP	GO:0045229	external encapsulating structure organization	None	Extended
BP	GO:0048437	floral organ development	IEA	AHRD
BP	GO:0048518	positive regulation of biological process	None	Extended
BP	GO:0048580	regulation of post-embryonic development	None	Extended
BP	GO:0048582	positive regulation of post-embryonic development	None	Extended
BP	GO:0048583	regulation of response to stimulus	None	Extended
BP	GO:0048584	positive regulation of response to stimulus	IEA	AHRD
BP	GO:0048638	regulation of developmental growth	None	Extended
BP	GO:0048646	anatomical structure formation involved in morphogenesis	None	Extended
BP	GO:0048831	regulation of shoot system development	IEA	AHRD
BP	GO:0048856	anatomical structure development	None	Extended
BP	GO:0050776	regulation of immune response	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050793	regulation of developmental process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051094	positive regulation of developmental process	None	Extended
BP	GO:0051128	regulation of cellular component organization	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051239	regulation of multicellular organismal process	None	Extended
BP	GO:0051240	positive regulation of multicellular organismal process	None	Extended
BP	GO:0051301	cell division	None	Extended
MF	GO:0051427	hormone receptor binding	None	Extended
MF	GO:0051428	peptide hormone receptor binding	IEA	AHRD
BP	GO:0051510	regulation of unidimensional cell growth	None	Extended
BP	GO:0051707	response to other organism	None	Extended
BP	GO:0051716	cellular response to stimulus	None	Extended
MF	GO:0060089	molecular transducer activity	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0070887	cellular response to chemical stimulus	None	Extended
BP	GO:0071215	cellular response to abscisic acid stimulus	IEA	AHRD
BP	GO:0071310	cellular response to organic substance	None	Extended
BP	GO:0071396	cellular response to lipid	None	Extended
BP	GO:0071495	cellular response to endogenous stimulus	None	Extended
BP	GO:0071554	cell wall organization or biogenesis	None	Extended
BP	GO:0071555	cell wall organization	IEA	AHRD
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
BP	GO:0080092	regulation of pollen tube growth	IEA	AHRD
BP	GO:0080113	regulation of seed growth	IEA	AHRD
BP	GO:0080134	regulation of response to stress	None	Extended
BP	GO:0090548	response to nitrate starvation	IEA	AHRD
BP	GO:0097305	response to alcohol	None	Extended
BP	GO:0097306	cellular response to alcohol	None	Extended
BP	GO:0098727	maintenance of cell number	None	Extended
BP	GO:0099402	plant organ development	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1900150	regulation of defense response to fungus	None	Extended
BP	GO:1900376	regulation of secondary metabolite biosynthetic process	None	Extended
BP	GO:1901141	regulation of lignin biosynthetic process	IEA	AHRD
BP	GO:1901333	positive regulation of lateral root development	IEA	AHRD
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901700	response to oxygen-containing compound	None	Extended
BP	GO:1901701	cellular response to oxygen-containing compound	None	Extended
BP	GO:1902025	nitrate import	IEA	AHRD
BP	GO:1903338	regulation of cell wall organization or biogenesis	None	Extended
BP	GO:1905034	regulation of antifungal innate immune response	IEA	AHRD
BP	GO:1905393	plant organ formation	None	Extended
BP	GO:2000023	regulation of lateral root development	None	Extended
BP	GO:2000026	regulation of multicellular organismal development	None	Extended
BP	GO:2000069	regulation of post-embryonic root development	None	Extended
BP	GO:2000241	regulation of reproductive process	None	Extended
BP	GO:2000280	regulation of root development	None	Extended
BP	GO:2000652	regulation of secondary cell wall biogenesis	IEA	AHRD
BP	GO:2000762	regulation of phenylpropanoid metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000976	transcription cis-regulatory region binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0000977	RNA polymerase II transcription regulatory region sequence-specific DNA binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0000978	RNA polymerase II cis-regulatory region sequence-specific DNA binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific	IEP	Predict GO terms from Neighborhoods
MF	GO:0000987	cis-regulatory region sequence-specific DNA binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0001067	transcription regulatory region nucleic acid binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0001101	response to acid chemical	IEP	Predict GO terms from Neighborhoods
MF	GO:0001216	DNA-binding transcription activator activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0003676	nucleic acid binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0003677	DNA binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0003690	double-stranded DNA binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0003700	DNA-binding transcription factor activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0005634	nucleus	IEP	Predict GO terms from Neighborhoods
BP	GO:0006355	regulation of DNA-templated transcription	IEP	Predict GO terms from Neighborhoods
BP	GO:0009270	response to humidity	IEP	Predict GO terms from Neighborhoods
BP	GO:0009409	response to cold	IEP	Predict GO terms from Neighborhoods
BP	GO:0009415	response to water	IEP	Predict GO terms from Neighborhoods
BP	GO:0009631	cold acclimation	IEP	Predict GO terms from Neighborhoods
BP	GO:0009891	positive regulation of biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009892	negative regulation of metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009893	positive regulation of metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009913	epidermal cell differentiation	IEP	Predict GO terms from Neighborhoods
BP	GO:0009963	positive regulation of flavonoid biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0010035	response to inorganic substance	IEP	Predict GO terms from Neighborhoods
BP	GO:0010377	guard cell fate commitment	IEP	Predict GO terms from Neighborhoods
BP	GO:0010444	guard mother cell differentiation	IEP	Predict GO terms from Neighborhoods
BP	GO:0010468	regulation of gene expression	IEP	Predict GO terms from Neighborhoods
BP	GO:0010556	regulation of macromolecule biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0010557	positive regulation of macromolecule biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0010604	positive regulation of macromolecule metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0010605	negative regulation of macromolecule metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0030154	cell differentiation	IEP	Predict GO terms from Neighborhoods
BP	GO:0030855	epithelial cell differentiation	IEP	Predict GO terms from Neighborhoods
BP	GO:0031056	regulation of histone modification	IEP	Predict GO terms from Neighborhoods
BP	GO:0031057	negative regulation of histone modification	IEP	Predict GO terms from Neighborhoods
BP	GO:0031060	regulation of histone methylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0031061	negative regulation of histone methylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0031324	negative regulation of cellular metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0031325	positive regulation of cellular metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0031328	positive regulation of cellular biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0031399	regulation of protein modification process	IEP	Predict GO terms from Neighborhoods
BP	GO:0031400	negative regulation of protein modification process	IEP	Predict GO terms from Neighborhoods
BP	GO:0031539	positive regulation of anthocyanin metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0031542	positive regulation of anthocyanin biosynthetic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0042803	protein homodimerization activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0043565	sequence-specific DNA binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0045165	cell fate commitment	IEP	Predict GO terms from Neighborhoods
BP	GO:0045595	regulation of cell differentiation	IEP	Predict GO terms from Neighborhoods
BP	GO:0045597	positive regulation of cell differentiation	IEP	Predict GO terms from Neighborhoods
BP	GO:0045893	positive regulation of DNA-templated transcription	IEP	Predict GO terms from Neighborhoods
BP	GO:0045935	positive regulation of nucleobase-containing compound metabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0046983	protein dimerization activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0047484	regulation of response to osmotic stress	IEP	Predict GO terms from Neighborhoods
BP	GO:0048519	negative regulation of biological process	IEP	Predict GO terms from Neighborhoods
BP	GO:0048522	positive regulation of cellular process	IEP	Predict GO terms from Neighborhoods
BP	GO:0048523	negative regulation of cellular process	IEP	Predict GO terms from Neighborhoods
BP	GO:0048869	cellular developmental process	IEP	Predict GO terms from Neighborhoods
BP	GO:0051171	regulation of nitrogen compound metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0051172	negative regulation of nitrogen compound metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0051173	positive regulation of nitrogen compound metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0051246	regulation of protein metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0051248	negative regulation of protein metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0051252	regulation of RNA metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0051254	positive regulation of RNA metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0051302	regulation of cell division	IEP	Predict GO terms from Neighborhoods
BP	GO:0051782	negative regulation of cell division	IEP	Predict GO terms from Neighborhoods
BP	GO:0060255	regulation of macromolecule metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0061085	regulation of histone H3-K27 methylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0061086	negative regulation of histone H3-K27 methylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0090547	response to low humidity	IEP	Predict GO terms from Neighborhoods
BP	GO:0090627	plant epidermal cell differentiation	IEP	Predict GO terms from Neighborhoods
MF	GO:0140110	transcription regulator activity	IEP	Predict GO terms from Neighborhoods
BP	GO:1902680	positive regulation of RNA biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1903506	regulation of nucleic acid-templated transcription	IEP	Predict GO terms from Neighborhoods
BP	GO:1903508	positive regulation of nucleic acid-templated transcription	IEP	Predict GO terms from Neighborhoods
MF	GO:1990837	sequence-specific double-stranded DNA binding	IEP	Predict GO terms from Neighborhoods
BP	GO:2000038	regulation of stomatal complex development	IEP	Predict GO terms from Neighborhoods
BP	GO:2001141	regulation of RNA biosynthetic process	IEP	Predict GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR001611	Leu-rich_rpt	326	347
IPR001611	Leu-rich_rpt	227	249
IPR003892	CUE	477	509
IPR001611	Leu-rich_rpt	132	192
IPR009060	UBA-like_sf	475	513

External Links

No external refs found!

SOLTUB.AGRIA.G00000041098

Expression Profile

Co-expression Networks

Functional Annotation