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  5. SOLTUB.AGRIA.G00000041212

SOLTUB.AGRIA.G00000041212


Description : Extensin-like protein Ext1


Gene families : OG_02_0000174 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000041212
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_86

Target Alias Description ECC score Gene Family Method Actions
SOLTUB.AGRIA.G00000041363 No alias Extensin-like protein Ext1 0.06 Orthogroups with 8 Potato genotypes
SOLTUB.AGRIA.G00000041363 No alias Extensin-like protein Ext1 0.06 Orthogroups with 8 Potato genotypes
SOLTUB.AGRIA.G00000041363 No alias Extensin-like protein Ext1 0.06 Orthogroups with 8 Potato genotypes

Type GO Term Name Evidence Source
CC GO:0110165 cellular anatomical entity IEA AHRD
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Type GO Term Name Evidence Source
MF GO:0003860 3-hydroxyisobutyryl-CoA hydrolase activity IEP Predict GO terms from Neighborhoods
CC GO:0005576 extracellular region IEP Predict GO terms from Neighborhoods
CC GO:0005618 cell wall IEP Predict GO terms from Neighborhoods
CC GO:0005912 adherens junction IEP Predict GO terms from Neighborhoods
BP GO:0006573 valine metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006574 valine catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0007009 plasma membrane organization IEP Predict GO terms from Neighborhoods
BP GO:0007272 ensheathment of neurons IEP Predict GO terms from Neighborhoods
BP GO:0008366 axon ensheathment IEP Predict GO terms from Neighborhoods
BP GO:0009063 cellular amino acid catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009083 branched-chain amino acid catabolic process IEP Predict GO terms from Neighborhoods
CC GO:0009505 plant-type cell wall IEP Predict GO terms from Neighborhoods
BP GO:0009741 response to brassinosteroid IEP Predict GO terms from Neighborhoods
BP GO:0009791 post-embryonic development IEP Predict GO terms from Neighborhoods
BP GO:0010029 regulation of seed germination IEP Predict GO terms from Neighborhoods
BP GO:0010030 positive regulation of seed germination IEP Predict GO terms from Neighborhoods
BP GO:0016054 organic acid catabolic process IEP Predict GO terms from Neighborhoods
MF GO:0016289 CoA hydrolase activity IEP Predict GO terms from Neighborhoods
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Predict GO terms from Neighborhoods
BP GO:0019226 transmission of nerve impulse IEP Predict GO terms from Neighborhoods
BP GO:0019233 sensory perception of pain IEP Predict GO terms from Neighborhoods
BP GO:0021675 nerve development IEP Predict GO terms from Neighborhoods
CC GO:0030312 external encapsulating structure IEP Predict GO terms from Neighborhoods
BP GO:0032287 peripheral nervous system myelin maintenance IEP Predict GO terms from Neighborhoods
BP GO:0032288 myelin assembly IEP Predict GO terms from Neighborhoods
BP GO:0032290 peripheral nervous system myelin formation IEP Predict GO terms from Neighborhoods
MF GO:0033835 flavanone 7-O-glucoside 2''-O-beta-L-rhamnosyltransferase activity IEP Predict GO terms from Neighborhoods
BP GO:0035637 multicellular organismal signaling IEP Predict GO terms from Neighborhoods
BP GO:0036294 cellular response to decreased oxygen levels IEP Predict GO terms from Neighborhoods
CC GO:0043209 myelin sheath IEP Predict GO terms from Neighborhoods
BP GO:0043217 myelin maintenance IEP Predict GO terms from Neighborhoods
BP GO:0044380 protein localization to cytoskeleton IEP Predict GO terms from Neighborhoods
BP GO:0046395 carboxylic acid catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0048580 regulation of post-embryonic development IEP Predict GO terms from Neighborhoods
BP GO:0048582 positive regulation of post-embryonic development IEP Predict GO terms from Neighborhoods
MF GO:0050636 vinorine synthase activity IEP Predict GO terms from Neighborhoods
BP GO:0051094 positive regulation of developmental process IEP Predict GO terms from Neighborhoods
BP GO:0051211 anisotropic cell growth IEP Predict GO terms from Neighborhoods
BP GO:0051239 regulation of multicellular organismal process IEP Predict GO terms from Neighborhoods
BP GO:0051240 positive regulation of multicellular organismal process IEP Predict GO terms from Neighborhoods
BP GO:0071453 cellular response to oxygen levels IEP Predict GO terms from Neighborhoods
BP GO:0071456 cellular response to hypoxia IEP Predict GO terms from Neighborhoods
BP GO:0072697 protein localization to cell cortex IEP Predict GO terms from Neighborhoods
BP GO:0072698 protein localization to microtubule cytoskeleton IEP Predict GO terms from Neighborhoods
BP GO:0072699 protein localization to cortical microtubule cytoskeleton IEP Predict GO terms from Neighborhoods
BP GO:0090436 leaf pavement cell development IEP Predict GO terms from Neighborhoods
BP GO:1900140 regulation of seedling development IEP Predict GO terms from Neighborhoods
BP GO:2000026 regulation of multicellular organismal development IEP Predict GO terms from Neighborhoods
BP GO:2000028 regulation of photoperiodism, flowering IEP Predict GO terms from Neighborhoods
BP GO:2000241 regulation of reproductive process IEP Predict GO terms from Neighborhoods
BP GO:2001006 regulation of cellulose biosynthetic process IEP Predict GO terms from Neighborhoods

No InterPro domains available for this sequence

No external refs found!