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  5. SOLTUB.AGRIA.G00000041363

SOLTUB.AGRIA.G00000041363


Description : Extensin-like protein Ext1


Gene families : OG_02_0000174 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000041363
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_86

Target Alias Description ECC score Gene Family Method Actions
SOLTUB.AGRIA.G00000041212 No alias Extensin-like protein Ext1 0.06 Orthogroups with 8 Potato genotypes
SOLTUB.AGRIA.G00000041259 No alias Extensin-like protein Ext1 0.03 Orthogroups with 8 Potato genotypes
SOLTUB.AGRIA.G00000041267 No alias Extensin-like protein Ext1 0.03 Orthogroups with 8 Potato genotypes
SOLTUB.AGRIA.G00000041269 No alias Extensin-like protein Ext1 0.03 Orthogroups with 8 Potato genotypes
SOLTUB.AGRIA.G00000042295 No alias Extensin-like protein Ext1 0.03 Orthogroups with 8 Potato genotypes
SOLTUB.AGRIA.G00000042298 No alias Extensin-like protein Ext1 0.03 Orthogroups with 8 Potato genotypes
SOLTUB.AGRIA.G00000042299 No alias Extensin-like protein Ext1 0.03 Orthogroups with 8 Potato genotypes
SOLTUB.AGRIA.G00000042300 No alias Extensin-like protein Ext1 0.03 Orthogroups with 8 Potato genotypes
SOLTUB.AGRIA.G00000042301 No alias Extensin-like protein Ext1 0.03 Orthogroups with 8 Potato genotypes
SOLTUB.AGRIA.G00000041212 No alias Extensin-like protein Ext1 0.06 Orthogroups with 8 Potato genotypes
SOLTUB.AGRIA.G00000041259 No alias Extensin-like protein Ext1 0.03 Orthogroups with 8 Potato genotypes
SOLTUB.AGRIA.G00000041267 No alias Extensin-like protein Ext1 0.03 Orthogroups with 8 Potato genotypes
SOLTUB.AGRIA.G00000041269 No alias Extensin-like protein Ext1 0.03 Orthogroups with 8 Potato genotypes
SOLTUB.AGRIA.G00000042295 No alias Extensin-like protein Ext1 0.03 Orthogroups with 8 Potato genotypes
SOLTUB.AGRIA.G00000042298 No alias Extensin-like protein Ext1 0.03 Orthogroups with 8 Potato genotypes
SOLTUB.AGRIA.G00000042299 No alias Extensin-like protein Ext1 0.03 Orthogroups with 8 Potato genotypes
SOLTUB.AGRIA.G00000042300 No alias Extensin-like protein Ext1 0.03 Orthogroups with 8 Potato genotypes
SOLTUB.AGRIA.G00000042301 No alias Extensin-like protein Ext1 0.03 Orthogroups with 8 Potato genotypes
SOLTUB.AGRIA.G00000041212 No alias Extensin-like protein Ext1 0.06 Orthogroups with 8 Potato genotypes
SOLTUB.AGRIA.G00000041259 No alias Extensin-like protein Ext1 0.03 Orthogroups with 8 Potato genotypes
SOLTUB.AGRIA.G00000041267 No alias Extensin-like protein Ext1 0.03 Orthogroups with 8 Potato genotypes
SOLTUB.AGRIA.G00000041269 No alias Extensin-like protein Ext1 0.03 Orthogroups with 8 Potato genotypes
SOLTUB.AGRIA.G00000042295 No alias Extensin-like protein Ext1 0.03 Orthogroups with 8 Potato genotypes
SOLTUB.AGRIA.G00000042298 No alias Extensin-like protein Ext1 0.03 Orthogroups with 8 Potato genotypes
SOLTUB.AGRIA.G00000042299 No alias Extensin-like protein Ext1 0.03 Orthogroups with 8 Potato genotypes
SOLTUB.AGRIA.G00000042300 No alias Extensin-like protein Ext1 0.03 Orthogroups with 8 Potato genotypes
SOLTUB.AGRIA.G00000042301 No alias Extensin-like protein Ext1 0.03 Orthogroups with 8 Potato genotypes

Type GO Term Name Evidence Source
CC GO:0110165 cellular anatomical entity IEA AHRD
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Type GO Term Name Evidence Source
MF GO:0003860 3-hydroxyisobutyryl-CoA hydrolase activity IEP Predict GO terms from Neighborhoods
BP GO:0005984 disaccharide metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0005985 sucrose metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006573 valine metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006574 valine catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009063 cellular amino acid catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009081 branched-chain amino acid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009083 branched-chain amino acid catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009311 oligosaccharide metabolic process IEP Predict GO terms from Neighborhoods
MF GO:0016289 CoA hydrolase activity IEP Predict GO terms from Neighborhoods
MF GO:0016790 thiolester hydrolase activity IEP Predict GO terms from Neighborhoods
BP GO:1901606 alpha-amino acid catabolic process IEP Predict GO terms from Neighborhoods

No InterPro domains available for this sequence

No external refs found!