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  5. SOLTUB.AGRIA.G00000041527

SOLTUB.AGRIA.G00000041527


Description : MADS-box transcription factor family protein


Gene families : OG_02_0025305 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000041527
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_62


Type GO Term Name Evidence Source
MF GO:0000976 transcription cis-regulatory region binding IEA AHRD
MF GO:0005515 protein binding IEA AHRD
CC GO:0005634 nucleus IEA AHRD
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Type GO Term Name Evidence Source
CC GO:0000329 fungal-type vacuole membrane IEP Predict GO terms from Neighborhoods
BP GO:0001708 cell fate specification IEP Predict GO terms from Neighborhoods
MF GO:0005385 zinc ion transmembrane transporter activity IEP Predict GO terms from Neighborhoods
BP GO:0006824 cobalt ion transport IEP Predict GO terms from Neighborhoods
BP GO:0006828 manganese ion transport IEP Predict GO terms from Neighborhoods
BP GO:0006829 zinc ion transport IEP Predict GO terms from Neighborhoods
BP GO:0006877 cellular cobalt ion homeostasis IEP Predict GO terms from Neighborhoods
BP GO:0009880 embryonic pattern specification IEP Predict GO terms from Neighborhoods
BP GO:0010014 meristem initiation IEP Predict GO terms from Neighborhoods
BP GO:0010043 response to zinc ion IEP Predict GO terms from Neighborhoods
BP GO:0010155 regulation of proton transport IEP Predict GO terms from Neighborhoods
MF GO:0016780 phosphotransferase activity, for other substituted phosphate groups IEP Predict GO terms from Neighborhoods
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Predict GO terms from Neighborhoods
BP GO:0030587 sorocarp development IEP Predict GO terms from Neighborhoods
CC GO:0030667 secretory granule membrane IEP Predict GO terms from Neighborhoods
BP GO:0032119 sequestering of zinc ion IEP Predict GO terms from Neighborhoods
BP GO:0042254 ribosome biogenesis IEP Predict GO terms from Neighborhoods
MF GO:0046915 transition metal ion transmembrane transporter activity IEP Predict GO terms from Neighborhoods
BP GO:0046916 cellular transition metal ion homeostasis IEP Predict GO terms from Neighborhoods
BP GO:0046967 cytosol to endoplasmic reticulum transport IEP Predict GO terms from Neighborhoods
BP GO:0050801 ion homeostasis IEP Predict GO terms from Neighborhoods
BP GO:0051238 sequestering of metal ion IEP Predict GO terms from Neighborhoods
MF GO:0051377 mannose-ethanolamine phosphotransferase activity IEP Predict GO terms from Neighborhoods
BP GO:0051651 maintenance of location in cell IEP Predict GO terms from Neighborhoods
BP GO:0055065 metal ion homeostasis IEP Predict GO terms from Neighborhoods
BP GO:0055068 cobalt ion homeostasis IEP Predict GO terms from Neighborhoods
BP GO:0055080 cation homeostasis IEP Predict GO terms from Neighborhoods
BP GO:0061687 detoxification of inorganic compound IEP Predict GO terms from Neighborhoods
CC GO:0062039 biofilm matrix IEP Predict GO terms from Neighborhoods
CC GO:0062040 fungal biofilm matrix IEP Predict GO terms from Neighborhoods
BP GO:0062111 zinc ion import into organelle IEP Predict GO terms from Neighborhoods
BP GO:0071577 zinc ion transmembrane transport IEP Predict GO terms from Neighborhoods
BP GO:0071585 detoxification of cadmium ion IEP Predict GO terms from Neighborhoods
BP GO:0090421 embryonic meristem initiation IEP Predict GO terms from Neighborhoods
BP GO:0098771 inorganic ion homeostasis IEP Predict GO terms from Neighborhoods
BP GO:0098849 cellular detoxification of cadmium ion IEP Predict GO terms from Neighborhoods
BP GO:0140209 zinc ion import into endoplasmic reticulum IEP Predict GO terms from Neighborhoods
BP GO:0140820 cytosol to Golgi apparatus transport IEP Predict GO terms from Neighborhoods
BP GO:1904257 zinc ion import into Golgi lumen IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR002100 TF_MADSbox 2 22
IPR036879 TF_MADSbox_sf 2 64
No external refs found!