SOLTUB.AGRIA.G00000041640

Description : GATA type zinc finger transcription factor family protein

Gene families : OG_02_0021312 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000041640
Cluster	HCCA Clusters (HRR 50 & PCC 0.5): Cluster_187

Type	GO Term	Name	Evidence	Source
MF	GO:0000976	transcription cis-regulatory region binding	IEA	AHRD
MF	GO:0001067	transcription regulatory region nucleic acid binding	None	Extended
CC	GO:0001725	stress fiber	IEA	AHRD
BP	GO:0003008	system process	IEA	AHRD
BP	GO:0003279	cardiac septum development	None	Extended
BP	GO:0003281	ventricular septum development	IEA	AHRD
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003690	double-stranded DNA binding	None	Extended
MF	GO:0003723	RNA binding	None	Extended
MF	GO:0003729	mRNA binding	IEA	AHRD
MF	GO:0003779	actin binding	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005654	nucleoplasm	IEA	AHRD
CC	GO:0005829	cytosol	IEA	AHRD
BP	GO:0006629	lipid metabolic process	IEA	AHRD
BP	GO:0007015	actin filament organization	None	Extended
MF	GO:0008092	cytoskeletal protein binding	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009653	anatomical structure morphogenesis	None	Extended
BP	GO:0009987	cellular process	None	Extended
CC	GO:0016020	membrane	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0022607	cellular component assembly	None	Extended
CC	GO:0030018	Z disc	IEA	AHRD
CC	GO:0030054	cell junction	IEA	AHRD
CC	GO:0032154	cleavage furrow	IEA	AHRD
CC	GO:0032432	actin filament bundle	None	Extended
BP	GO:0032501	multicellular organismal process	None	Extended
BP	GO:0032502	developmental process	None	Extended
BP	GO:0032970	regulation of actin filament-based process	IEA	AHRD
BP	GO:0033036	macromolecule localization	IEA	AHRD
BP	GO:0034330	cell junction organization	None	Extended
BP	GO:0042592	homeostatic process	None	Extended
CC	GO:0042641	actomyosin	None	Extended
MF	GO:0042805	actinin binding	None	Extended
CC	GO:0042995	cell projection	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0043565	sequence-specific DNA binding	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
MF	GO:0044877	protein-containing complex binding	None	Extended
BP	GO:0045216	cell-cell junction organization	IEA	AHRD
BP	GO:0045595	regulation of cell differentiation	IEA	AHRD
MF	GO:0046872	metal ion binding	IEA	AHRD
BP	GO:0048468	cell development	None	Extended
BP	GO:0048518	positive regulation of biological process	None	Extended
BP	GO:0048519	negative regulation of biological process	None	Extended
BP	GO:0048522	positive regulation of cellular process	IEA	AHRD
BP	GO:0048523	negative regulation of cellular process	IEA	AHRD
BP	GO:0048729	tissue morphogenesis	None	Extended
BP	GO:0048856	anatomical structure development	None	Extended
BP	GO:0048869	cellular developmental process	None	Extended
BP	GO:0048878	chemical homeostasis	IEA	AHRD
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050793	regulation of developmental process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050896	response to stimulus	IEA	AHRD
MF	GO:0051015	actin filament binding	IEA	AHRD
BP	GO:0051017	actin filament bundle assembly	IEA	AHRD
BP	GO:0051179	localization	None	Extended
MF	GO:0051393	alpha-actinin binding	IEA	AHRD
BP	GO:0055001	muscle cell development	IEA	AHRD
BP	GO:0055008	cardiac muscle tissue morphogenesis	IEA	AHRD
BP	GO:0060415	muscle tissue morphogenesis	None	Extended
BP	GO:0061572	actin filament bundle organization	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0065008	regulation of biological quality	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
BP	GO:0097435	supramolecular fiber organization	None	Extended
CC	GO:0097517	contractile actin filament bundle	None	Extended
CC	GO:0098590	plasma membrane region	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
CC	GO:0120025	plasma membrane bounded cell projection	IEA	AHRD
MF	GO:1901363	heterocyclic compound binding	None	Extended
MF	GO:1990837	sequence-specific double-stranded DNA binding	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000079	regulation of cyclin-dependent protein serine/threonine kinase activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0001673	male germ cell nucleus	IEP	Predict GO terms from Neighborhoods
BP	GO:0001933	negative regulation of protein phosphorylation	IEP	Predict GO terms from Neighborhoods
MF	GO:0003697	single-stranded DNA binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0004097	catechol oxidase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004551	dinucleotide phosphatase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004860	protein kinase inhibitor activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004861	cyclin-dependent protein serine/threonine kinase inhibitor activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0005775	vacuolar lumen	IEP	Predict GO terms from Neighborhoods
BP	GO:0006469	negative regulation of protein kinase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0009806	lignan metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009807	lignan biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0010017	red or far-red light signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0010018	far-red light signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0010099	regulation of photomorphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0010161	red light signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0010218	response to far red light	IEP	Predict GO terms from Neighborhoods
MF	GO:0016538	cyclin-dependent protein serine/threonine kinase regulator activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0016679	oxidoreductase activity, acting on diphenols and related substances as donors	IEP	Predict GO terms from Neighborhoods
MF	GO:0016682	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor	IEP	Predict GO terms from Neighborhoods
MF	GO:0019207	kinase regulator activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0019210	kinase inhibitor activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0019887	protein kinase regulator activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0030291	protein serine/threonine kinase inhibitor activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0033614	chloroplast proton-transporting ATP synthase complex assembly	IEP	Predict GO terms from Neighborhoods
BP	GO:0033673	negative regulation of kinase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0033793	aureusidin synthase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0035529	NADH pyrophosphatase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0042326	negative regulation of phosphorylation	IEP	Predict GO terms from Neighborhoods
CC	GO:0043073	germ cell nucleus	IEP	Predict GO terms from Neighborhoods
BP	GO:0043461	proton-transporting ATP synthase complex assembly	IEP	Predict GO terms from Neighborhoods
BP	GO:0045736	negative regulation of cyclin-dependent protein serine/threonine kinase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0046914	transition metal ion binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0046992	oxidoreductase activity, acting on X-H and Y-H to form an X-Y bond	IEP	Predict GO terms from Neighborhoods
MF	GO:0046993	oxidoreductase activity, acting on X-H and Y-H to form an X-Y bond, with oxygen as acceptor	IEP	Predict GO terms from Neighborhoods
MF	GO:0047631	ADP-ribose diphosphatase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0048576	positive regulation of short-day photoperiodism, flowering	IEP	Predict GO terms from Neighborhoods
BP	GO:0048579	negative regulation of long-day photoperiodism, flowering	IEP	Predict GO terms from Neighborhoods
BP	GO:0048586	regulation of long-day photoperiodism, flowering	IEP	Predict GO terms from Neighborhoods
BP	GO:0048587	regulation of short-day photoperiodism, flowering	IEP	Predict GO terms from Neighborhoods
MF	GO:0051287	NAD binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0051348	negative regulation of transferase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0060688	regulation of morphogenesis of a branching structure	IEP	Predict GO terms from Neighborhoods
BP	GO:0070071	proton-transporting two-sector ATPase complex assembly	IEP	Predict GO terms from Neighborhoods
BP	GO:0071489	cellular response to red or far red light	IEP	Predict GO terms from Neighborhoods
BP	GO:0071490	cellular response to far red light	IEP	Predict GO terms from Neighborhoods
BP	GO:0071491	cellular response to red light	IEP	Predict GO terms from Neighborhoods
BP	GO:0071900	regulation of protein serine/threonine kinase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0071901	negative regulation of protein serine/threonine kinase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0080151	positive regulation of salicylic acid mediated signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:1901708	(+)-3'-hydroxylarreatricin biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1901709	(+)-larreatricin metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1904029	regulation of cyclin-dependent protein kinase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:1904030	negative regulation of cyclin-dependent protein kinase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:1905428	regulation of plant organ formation	IEP	Predict GO terms from Neighborhoods
BP	GO:2000031	regulation of salicylic acid mediated signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:2000032	regulation of secondary shoot formation	IEP	Predict GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR001781	Znf_LIM	107	161
IPR001781	Znf_LIM	10	64

External Links

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SOLTUB.AGRIA.G00000041640

Expression Profile

Co-expression Networks

Functional Annotation