SOLTUB.AGRIA.G00000041776

Description : Transducin/WD40 repeat-like superfamily protein

Gene families : OG_02_0021306 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000041776
Cluster	HCCA Clusters (HRR 50 & PCC 0.5): Cluster_108

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	AHRD
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005737	cytoplasm	IEA	AHRD
BP	GO:0006793	phosphorus metabolic process	None	Extended
BP	GO:0006796	phosphate-containing compound metabolic process	None	Extended
BP	GO:0007049	cell cycle	IEA	AHRD
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009846	pollen germination	IEA	AHRD
BP	GO:0009966	regulation of signal transduction	IEA	AHRD
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010646	regulation of cell communication	None	Extended
BP	GO:0016310	phosphorylation	IEA	AHRD
MF	GO:0016740	transferase activity	IEA	AHRD
BP	GO:0022414	reproductive process	None	Extended
BP	GO:0023051	regulation of signaling	None	Extended
CC	GO:0031974	membrane-enclosed lumen	None	Extended
CC	GO:0031981	nuclear lumen	IEA	AHRD
BP	GO:0032501	multicellular organismal process	None	Extended
BP	GO:0032502	developmental process	None	Extended
BP	GO:0032879	regulation of localization	IEA	AHRD
CC	GO:0032991	protein-containing complex	None	Extended
CC	GO:0043233	organelle lumen	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0048519	negative regulation of biological process	None	Extended
BP	GO:0048523	negative regulation of cellular process	IEA	AHRD
BP	GO:0048583	regulation of response to stimulus	None	Extended
BP	GO:0048731	system development	IEA	AHRD
BP	GO:0048856	anatomical structure development	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051239	regulation of multicellular organismal process	IEA	AHRD
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0065008	regulation of biological quality	IEA	AHRD
CC	GO:0070013	intracellular organelle lumen	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
CC	GO:1902494	catalytic complex	None	Extended
CC	GO:1990234	transferase complex	IEA	AHRD

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Type	GO Term	Name	Evidence	Source
BP	GO:0000272	polysaccharide catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0000741	karyogamy	IEP	Predict GO terms from Neighborhoods
CC	GO:0001725	stress fiber	IEP	Predict GO terms from Neighborhoods
CC	GO:0001726	ruffle	IEP	Predict GO terms from Neighborhoods
BP	GO:0003279	cardiac septum development	IEP	Predict GO terms from Neighborhoods
BP	GO:0003281	ventricular septum development	IEP	Predict GO terms from Neighborhoods
MF	GO:0003785	actin monomer binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0004672	protein kinase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004674	protein serine/threonine kinase activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0005911	cell-cell junction	IEP	Predict GO terms from Neighborhoods
CC	GO:0005925	focal adhesion	IEP	Predict GO terms from Neighborhoods
BP	GO:0005976	polysaccharide metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006968	cellular defense response	IEP	Predict GO terms from Neighborhoods
BP	GO:0006997	nucleus organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0007015	actin filament organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0008064	regulation of actin polymerization or depolymerization	IEP	Predict GO terms from Neighborhoods
MF	GO:0008081	phosphoric diester hydrolase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0008889	glycerophosphodiester phosphodiesterase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0009269	response to desiccation	IEP	Predict GO terms from Neighborhoods
CC	GO:0009506	plasmodesma	IEP	Predict GO terms from Neighborhoods
CC	GO:0009527	plastid outer membrane	IEP	Predict GO terms from Neighborhoods
CC	GO:0009707	chloroplast outer membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0010197	polar nucleus fusion	IEP	Predict GO terms from Neighborhoods
BP	GO:0010483	pollen tube reception	IEP	Predict GO terms from Neighborhoods
BP	GO:0015918	sterol transport	IEP	Predict GO terms from Neighborhoods
CC	GO:0016020	membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0016043	cellular component organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0016052	carbohydrate catabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0016301	kinase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	IEP	Predict GO terms from Neighborhoods
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	IEP	Predict GO terms from Neighborhoods
BP	GO:0016998	cell wall macromolecule catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0022600	digestive system process	IEP	Predict GO terms from Neighborhoods
CC	GO:0030018	Z disc	IEP	Predict GO terms from Neighborhoods
CC	GO:0030054	cell junction	IEP	Predict GO terms from Neighborhoods
CC	GO:0030055	cell-substrate junction	IEP	Predict GO terms from Neighborhoods
BP	GO:0030299	intestinal cholesterol absorption	IEP	Predict GO terms from Neighborhoods
BP	GO:0030301	cholesterol transport	IEP	Predict GO terms from Neighborhoods
MF	GO:0030599	pectinesterase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0030832	regulation of actin filament length	IEP	Predict GO terms from Neighborhoods
BP	GO:0030834	regulation of actin filament depolymerization	IEP	Predict GO terms from Neighborhoods
BP	GO:0030835	negative regulation of actin filament depolymerization	IEP	Predict GO terms from Neighborhoods
CC	GO:0031253	cell projection membrane	IEP	Predict GO terms from Neighborhoods
CC	GO:0031526	brush border membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0031529	ruffle organization	IEP	Predict GO terms from Neighborhoods
CC	GO:0032154	cleavage furrow	IEP	Predict GO terms from Neighborhoods
CC	GO:0032432	actin filament bundle	IEP	Predict GO terms from Neighborhoods
BP	GO:0032922	circadian regulation of gene expression	IEP	Predict GO terms from Neighborhoods
BP	GO:0032956	regulation of actin cytoskeleton organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0034330	cell junction organization	IEP	Predict GO terms from Neighborhoods
CC	GO:0035838	growing cell tip	IEP	Predict GO terms from Neighborhoods
BP	GO:0042545	cell wall modification	IEP	Predict GO terms from Neighborhoods
BP	GO:0042632	cholesterol homeostasis	IEP	Predict GO terms from Neighborhoods
CC	GO:0042641	actomyosin	IEP	Predict GO terms from Neighborhoods
MF	GO:0042805	actinin binding	IEP	Predict GO terms from Neighborhoods
CC	GO:0042995	cell projection	IEP	Predict GO terms from Neighborhoods
BP	GO:0043242	negative regulation of protein-containing complex disassembly	IEP	Predict GO terms from Neighborhoods
BP	GO:0043244	regulation of protein-containing complex disassembly	IEP	Predict GO terms from Neighborhoods
CC	GO:0043680	filiform apparatus	IEP	Predict GO terms from Neighborhoods
BP	GO:0044347	cell wall polysaccharide catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0045216	cell-cell junction organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0045229	external encapsulating structure organization	IEP	Predict GO terms from Neighborhoods
MF	GO:0045330	aspartyl esterase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0045489	pectin biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0045490	pectin catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0045730	respiratory burst	IEP	Predict GO terms from Neighborhoods
BP	GO:0046777	protein autophosphorylation	IEP	Predict GO terms from Neighborhoods
MF	GO:0046910	pectinesterase inhibitor activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0048358	mucilage pectin biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0048359	mucilage metabolic process involved in seed coat development	IEP	Predict GO terms from Neighborhoods
BP	GO:0048363	mucilage pectin metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0048468	cell development	IEP	Predict GO terms from Neighborhoods
BP	GO:0048469	cell maturation	IEP	Predict GO terms from Neighborhoods
BP	GO:0048511	rhythmic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0048764	trichoblast maturation	IEP	Predict GO terms from Neighborhoods
BP	GO:0048765	root hair cell differentiation	IEP	Predict GO terms from Neighborhoods
BP	GO:0048869	cellular developmental process	IEP	Predict GO terms from Neighborhoods
BP	GO:0050892	intestinal absorption	IEP	Predict GO terms from Neighborhoods
BP	GO:0050896	response to stimulus	IEP	Predict GO terms from Neighborhoods
MF	GO:0051015	actin filament binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0051017	actin filament bundle assembly	IEP	Predict GO terms from Neighborhoods
MF	GO:0051393	alpha-actinin binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0051494	negative regulation of cytoskeleton organization	IEP	Predict GO terms from Neighborhoods
MF	GO:0051722	protein C-terminal methylesterase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0051723	protein methylesterase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0051924	regulation of calcium ion transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0055001	muscle cell development	IEP	Predict GO terms from Neighborhoods
BP	GO:0055008	cardiac muscle tissue morphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0055092	sterol homeostasis	IEP	Predict GO terms from Neighborhoods
BP	GO:0060415	muscle tissue morphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0061572	actin filament bundle organization	IEP	Predict GO terms from Neighborhoods
CC	GO:0070161	anchoring junction	IEP	Predict GO terms from Neighborhoods
BP	GO:0071555	cell wall organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0071840	cellular component organization or biogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0072659	protein localization to plasma membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0080001	mucilage extrusion from seed coat	IEP	Predict GO terms from Neighborhoods
BP	GO:0080147	root hair cell development	IEP	Predict GO terms from Neighborhoods
CC	GO:0090404	pollen tube tip	IEP	Predict GO terms from Neighborhoods
BP	GO:0097272	ammonium homeostasis	IEP	Predict GO terms from Neighborhoods
BP	GO:0097275	cellular ammonium homeostasis	IEP	Predict GO terms from Neighborhoods
CC	GO:0097517	contractile actin filament bundle	IEP	Predict GO terms from Neighborhoods
CC	GO:0098588	bounding membrane of organelle	IEP	Predict GO terms from Neighborhoods
CC	GO:0098590	plasma membrane region	IEP	Predict GO terms from Neighborhoods
BP	GO:0098856	intestinal lipid absorption	IEP	Predict GO terms from Neighborhoods
BP	GO:0110053	regulation of actin filament organization	IEP	Predict GO terms from Neighborhoods
CC	GO:0120025	plasma membrane bounded cell projection	IEP	Predict GO terms from Neighborhoods
MF	GO:0140096	catalytic activity, acting on a protein	IEP	Predict GO terms from Neighborhoods
BP	GO:1901879	regulation of protein depolymerization	IEP	Predict GO terms from Neighborhoods
BP	GO:1901880	negative regulation of protein depolymerization	IEP	Predict GO terms from Neighborhoods
BP	GO:1902066	regulation of cell wall pectin metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1902288	regulation of defense response to oomycetes	IEP	Predict GO terms from Neighborhoods
BP	GO:1902289	negative regulation of defense response to oomycetes	IEP	Predict GO terms from Neighborhoods
BP	GO:1902904	negative regulation of supramolecular fiber organization	IEP	Predict GO terms from Neighborhoods
BP	GO:2000071	regulation of defense response by callose deposition	IEP	Predict GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR001680	WD40_repeat	179	208
IPR001680	WD40_repeat	269	297
IPR001680	WD40_repeat	214	249
IPR001680	WD40_repeat	70	96
IPR001680	WD40_repeat	111	134
IPR001680	WD40_repeat	347	392
IPR001680	WD40_repeat	307	339
IPR036322	WD40_repeat_dom_sf	65	400

External Links

No external refs found!

SOLTUB.AGRIA.G00000041776

Expression Profile

Co-expression Networks

Functional Annotation