SOLTUB.AGRIA.G00000041957

Description : Ubiquitin carboxyl-terminal hydrolase 19

Gene families : OG_02_0007107 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000041957
Cluster	HCCA Clusters (HRR 50 & PCC 0.5): Cluster_252

Type	GO Term	Name	Evidence	Source
BP	GO:0003006	developmental process involved in reproduction	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004175	endopeptidase activity	None	Extended
MF	GO:0004197	cysteine-type endopeptidase activity	IEA	AHRD
MF	GO:0004843	cysteine-type deubiquitinase activity	IEA	AHRD
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	AHRD
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005654	nucleoplasm	IEA	AHRD
CC	GO:0005829	cytosol	IEA	AHRD
BP	GO:0006508	proteolysis	None	Extended
BP	GO:0006511	ubiquitin-dependent protein catabolic process	IEA	AHRD
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0006996	organelle organization	IEA	AHRD
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008233	peptidase activity	None	Extended
MF	GO:0008234	cysteine-type peptidase activity	None	Extended
BP	GO:0009056	catabolic process	None	Extended
BP	GO:0009057	macromolecule catabolic process	None	Extended
BP	GO:0009791	post-embryonic development	None	Extended
BP	GO:0009894	regulation of catabolic process	None	Extended
BP	GO:0009908	flower development	IEA	AHRD
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010506	regulation of autophagy	IEA	AHRD
CC	GO:0016020	membrane	IEA	AHRD
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0016579	protein deubiquitination	IEA	AHRD
MF	GO:0016787	hydrolase activity	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0019783	ubiquitin-like protein peptidase activity	None	Extended
BP	GO:0019941	modification-dependent protein catabolic process	None	Extended
BP	GO:0022414	reproductive process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031329	regulation of cellular catabolic process	None	Extended
BP	GO:0031647	regulation of protein stability	IEA	AHRD
BP	GO:0032501	multicellular organismal process	None	Extended
BP	GO:0032502	developmental process	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0043632	modification-dependent macromolecule catabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044248	cellular catabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044265	cellular macromolecule catabolic process	None	Extended
BP	GO:0047484	regulation of response to osmotic stress	None	Extended
BP	GO:0048364	root development	IEA	AHRD
BP	GO:0048366	leaf development	IEA	AHRD
BP	GO:0048367	shoot system development	None	Extended
BP	GO:0048583	regulation of response to stimulus	None	Extended
BP	GO:0048608	reproductive structure development	None	Extended
BP	GO:0048731	system development	None	Extended
BP	GO:0048827	phyllome development	None	Extended
BP	GO:0048856	anatomical structure development	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051301	cell division	IEA	AHRD
BP	GO:0051603	proteolysis involved in protein catabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0065008	regulation of biological quality	None	Extended
BP	GO:0070646	protein modification by small protein removal	None	Extended
BP	GO:0070647	protein modification by small protein conjugation or removal	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
BP	GO:0080134	regulation of response to stress	None	Extended
BP	GO:0090567	reproductive shoot system development	None	Extended
BP	GO:0099402	plant organ development	None	Extended
MF	GO:0101005	deubiquitinase activity	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901000	regulation of response to salt stress	IEA	AHRD
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901575	organic substance catabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000038	very long-chain fatty acid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0000122	negative regulation of transcription by RNA polymerase II	IEP	Predict GO terms from Neighborhoods
MF	GO:0001671	ATPase activator activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0002637	regulation of immunoglobulin production	IEP	Predict GO terms from Neighborhoods
BP	GO:0002638	negative regulation of immunoglobulin production	IEP	Predict GO terms from Neighborhoods
BP	GO:0002682	regulation of immune system process	IEP	Predict GO terms from Neighborhoods
BP	GO:0002683	negative regulation of immune system process	IEP	Predict GO terms from Neighborhoods
BP	GO:0002697	regulation of immune effector process	IEP	Predict GO terms from Neighborhoods
BP	GO:0002698	negative regulation of immune effector process	IEP	Predict GO terms from Neighborhoods
BP	GO:0002700	regulation of production of molecular mediator of immune response	IEP	Predict GO terms from Neighborhoods
BP	GO:0002701	negative regulation of production of molecular mediator of immune response	IEP	Predict GO terms from Neighborhoods
MF	GO:0004857	enzyme inhibitor activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0005102	signaling receptor binding	IEP	Predict GO terms from Neighborhoods
CC	GO:0005615	extracellular space	IEP	Predict GO terms from Neighborhoods
CC	GO:0005635	nuclear envelope	IEP	Predict GO terms from Neighborhoods
CC	GO:0005930	axoneme	IEP	Predict GO terms from Neighborhoods
BP	GO:0006355	regulation of DNA-templated transcription	IEP	Predict GO terms from Neighborhoods
BP	GO:0006357	regulation of transcription by RNA polymerase II	IEP	Predict GO terms from Neighborhoods
BP	GO:0006457	protein folding	IEP	Predict GO terms from Neighborhoods
BP	GO:0006458	'de novo' protein folding	IEP	Predict GO terms from Neighborhoods
BP	GO:0006873	cellular ion homeostasis	IEP	Predict GO terms from Neighborhoods
BP	GO:0006874	cellular calcium ion homeostasis	IEP	Predict GO terms from Neighborhoods
BP	GO:0006875	cellular metal ion homeostasis	IEP	Predict GO terms from Neighborhoods
BP	GO:0006950	response to stress	IEP	Predict GO terms from Neighborhoods
BP	GO:0006983	ER overload response	IEP	Predict GO terms from Neighborhoods
BP	GO:0006984	ER-nucleus signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0006986	response to unfolded protein	IEP	Predict GO terms from Neighborhoods
BP	GO:0007276	gamete generation	IEP	Predict GO terms from Neighborhoods
BP	GO:0007283	spermatogenesis	IEP	Predict GO terms from Neighborhoods
MF	GO:0008134	transcription factor binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0008428	ribonuclease inhibitor activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0009890	negative regulation of biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009892	negative regulation of metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009895	negative regulation of catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009966	regulation of signal transduction	IEP	Predict GO terms from Neighborhoods
BP	GO:0009968	negative regulation of signal transduction	IEP	Predict GO terms from Neighborhoods
BP	GO:0010507	negative regulation of autophagy	IEP	Predict GO terms from Neighborhoods
BP	GO:0010556	regulation of macromolecule biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0010558	negative regulation of macromolecule biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0010605	negative regulation of macromolecule metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0010623	programmed cell death involved in cell development	IEP	Predict GO terms from Neighborhoods
BP	GO:0010646	regulation of cell communication	IEP	Predict GO terms from Neighborhoods
BP	GO:0010648	negative regulation of cell communication	IEP	Predict GO terms from Neighborhoods
BP	GO:0010941	regulation of cell death	IEP	Predict GO terms from Neighborhoods
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0019899	enzyme binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0023051	regulation of signaling	IEP	Predict GO terms from Neighborhoods
BP	GO:0023057	negative regulation of signaling	IEP	Predict GO terms from Neighborhoods
BP	GO:0030003	cellular cation homeostasis	IEP	Predict GO terms from Neighborhoods
BP	GO:0030324	lung development	IEP	Predict GO terms from Neighborhoods
MF	GO:0030544	Hsp70 protein binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0031072	heat shock protein binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0031324	negative regulation of cellular metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0031327	negative regulation of cellular biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0031330	negative regulation of cellular catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0032069	regulation of nuclease activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0032074	negative regulation of nuclease activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0032469	endoplasmic reticulum calcium ion homeostasis	IEP	Predict GO terms from Neighborhoods
BP	GO:0033119	negative regulation of RNA splicing	IEP	Predict GO terms from Neighborhoods
BP	GO:0033554	cellular response to stress	IEP	Predict GO terms from Neighborhoods
BP	GO:0034620	cellular response to unfolded protein	IEP	Predict GO terms from Neighborhoods
BP	GO:0034976	response to endoplasmic reticulum stress	IEP	Predict GO terms from Neighborhoods
BP	GO:0035071	salivary gland cell autophagic cell death	IEP	Predict GO terms from Neighborhoods
BP	GO:0035966	response to topologically incorrect protein	IEP	Predict GO terms from Neighborhoods
BP	GO:0035967	cellular response to topologically incorrect protein	IEP	Predict GO terms from Neighborhoods
CC	GO:0036477	somatodendritic compartment	IEP	Predict GO terms from Neighborhoods
BP	GO:0042689	regulation of crystal cell differentiation	IEP	Predict GO terms from Neighborhoods
BP	GO:0042691	positive regulation of crystal cell differentiation	IEP	Predict GO terms from Neighborhoods
BP	GO:0042981	regulation of apoptotic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0043066	negative regulation of apoptotic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0043067	regulation of programmed cell death	IEP	Predict GO terms from Neighborhoods
BP	GO:0043069	negative regulation of programmed cell death	IEP	Predict GO terms from Neighborhoods
BP	GO:0043086	negative regulation of catalytic activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0043484	regulation of RNA splicing	IEP	Predict GO terms from Neighborhoods
BP	GO:0043618	regulation of transcription from RNA polymerase II promoter in response to stress	IEP	Predict GO terms from Neighborhoods
BP	GO:0043620	regulation of DNA-templated transcription in response to stress	IEP	Predict GO terms from Neighborhoods
MF	GO:0044183	protein folding chaperone	IEP	Predict GO terms from Neighborhoods
BP	GO:0045597	positive regulation of cell differentiation	IEP	Predict GO terms from Neighborhoods
BP	GO:0045610	regulation of hemocyte differentiation	IEP	Predict GO terms from Neighborhoods
BP	GO:0045612	positive regulation of hemocyte differentiation	IEP	Predict GO terms from Neighborhoods
BP	GO:0045892	negative regulation of DNA-templated transcription	IEP	Predict GO terms from Neighborhoods
BP	GO:0045934	negative regulation of nucleobase-containing compound metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0048102	autophagic cell death	IEP	Predict GO terms from Neighborhoods
BP	GO:0048232	male gamete generation	IEP	Predict GO terms from Neighborhoods
BP	GO:0048523	negative regulation of cellular process	IEP	Predict GO terms from Neighborhoods
BP	GO:0048585	negative regulation of response to stimulus	IEP	Predict GO terms from Neighborhoods
BP	GO:0050790	regulation of catalytic activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0050821	protein stabilization	IEP	Predict GO terms from Neighborhoods
MF	GO:0051082	unfolded protein binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0051084	'de novo' post-translational protein folding	IEP	Predict GO terms from Neighborhoods
BP	GO:0051085	chaperone cofactor-dependent protein refolding	IEP	Predict GO terms from Neighborhoods
MF	GO:0051087	chaperone binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0051172	negative regulation of nitrogen compound metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0051252	regulation of RNA metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0051253	negative regulation of RNA metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0051336	regulation of hydrolase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0051346	negative regulation of hydrolase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0055074	calcium ion homeostasis	IEP	Predict GO terms from Neighborhoods
BP	GO:0060548	negative regulation of cell death	IEP	Predict GO terms from Neighborhoods
MF	GO:0060698	endoribonuclease inhibitor activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0060699	regulation of endoribonuclease activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0060700	regulation of ribonuclease activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0060701	negative regulation of ribonuclease activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0060702	negative regulation of endoribonuclease activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0061077	chaperone-mediated protein folding	IEP	Predict GO terms from Neighborhoods
BP	GO:0065009	regulation of molecular function	IEP	Predict GO terms from Neighborhoods
BP	GO:0070201	regulation of establishment of protein localization	IEP	Predict GO terms from Neighborhoods
BP	GO:0071216	cellular response to biotic stimulus	IEP	Predict GO terms from Neighborhoods
BP	GO:0072503	cellular divalent inorganic cation homeostasis	IEP	Predict GO terms from Neighborhoods
BP	GO:0072507	divalent inorganic cation homeostasis	IEP	Predict GO terms from Neighborhoods
BP	GO:0080135	regulation of cellular response to stress	IEP	Predict GO terms from Neighborhoods
BP	GO:0097201	negative regulation of transcription from RNA polymerase II promoter in response to stress	IEP	Predict GO terms from Neighborhoods
CC	GO:0097224	sperm connecting piece	IEP	Predict GO terms from Neighborhoods
MF	GO:0098772	molecular function regulator activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0098794	postsynapse	IEP	Predict GO terms from Neighborhoods
MF	GO:0140677	molecular function activator activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0140721	nuclease inhibitor activity	IEP	Predict GO terms from Neighborhoods
BP	GO:1902235	regulation of endoplasmic reticulum stress-induced intrinsic apoptotic signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:1902236	negative regulation of endoplasmic reticulum stress-induced intrinsic apoptotic signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:1902531	regulation of intracellular signal transduction	IEP	Predict GO terms from Neighborhoods
BP	GO:1902532	negative regulation of intracellular signal transduction	IEP	Predict GO terms from Neighborhoods
BP	GO:1902679	negative regulation of RNA biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1903506	regulation of nucleic acid-templated transcription	IEP	Predict GO terms from Neighborhoods
BP	GO:1903507	negative regulation of nucleic acid-templated transcription	IEP	Predict GO terms from Neighborhoods
BP	GO:1903573	negative regulation of response to endoplasmic reticulum stress	IEP	Predict GO terms from Neighborhoods
BP	GO:1904158	axonemal central apparatus assembly	IEP	Predict GO terms from Neighborhoods
BP	GO:1905897	regulation of response to endoplasmic reticulum stress	IEP	Predict GO terms from Neighborhoods
BP	GO:1990441	negative regulation of transcription from RNA polymerase II promoter in response to endoplasmic reticulum stress	IEP	Predict GO terms from Neighborhoods
BP	GO:2001141	regulation of RNA biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:2001233	regulation of apoptotic signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:2001234	negative regulation of apoptotic signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:2001242	regulation of intrinsic apoptotic signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:2001243	negative regulation of intrinsic apoptotic signaling pathway	IEP	Predict GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR001394	Peptidase_C19_UCH	106	407
IPR038765	Papain-like_cys_pep_sf	106	409
IPR002893	Znf_MYND	7	44

External Links

No external refs found!

SOLTUB.AGRIA.G00000041957

Expression Profile

Co-expression Networks

Functional Annotation