SOLTUB.AGRIA.G00000041974

Description : 6,7-dimethyl-8-ribityllumazine synthase

Gene families : OG_02_0007099 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000041974
Cluster	HCCA Clusters (HRR 50 & PCC 0.5): Cluster_32

Type	GO Term	Name	Evidence	Source
MF	GO:0000906	6,7-dimethyl-8-ribityllumazine synthase activity	IEA	AHRD
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005829	cytosol	IEA	AHRD
BP	GO:0006766	vitamin metabolic process	None	Extended
BP	GO:0006767	water-soluble vitamin metabolic process	None	Extended
BP	GO:0006771	riboflavin metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009110	vitamin biosynthetic process	None	Extended
BP	GO:0009231	riboflavin biosynthetic process	IEA	AHRD
CC	GO:0009349	riboflavin synthase complex	IEA	AHRD
CC	GO:0009532	plastid stroma	None	Extended
CC	GO:0009570	chloroplast stroma	IEA	AHRD
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016765	transferase activity, transferring alkyl or aryl (other than methyl) groups	None	Extended
BP	GO:0018130	heterocycle biosynthetic process	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0042364	water-soluble vitamin biosynthetic process	None	Extended
BP	GO:0042726	flavin-containing compound metabolic process	None	Extended
BP	GO:0042727	flavin-containing compound biosynthetic process	None	Extended
MF	GO:0042802	identical protein binding	IEA	AHRD
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0044283	small molecule biosynthetic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901362	organic cyclic compound biosynthetic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
CC	GO:1902494	catalytic complex	None	Extended
CC	GO:1990234	transferase complex	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000028	ribosomal small subunit assembly	IEP	Predict GO terms from Neighborhoods
BP	GO:0000054	ribosomal subunit export from nucleus	IEP	Predict GO terms from Neighborhoods
BP	GO:0000056	ribosomal small subunit export from nucleus	IEP	Predict GO terms from Neighborhoods
BP	GO:0000184	nuclear-transcribed mRNA catabolic process, nonsense-mediated decay	IEP	Predict GO terms from Neighborhoods
CC	GO:0000221	vacuolar proton-transporting V-type ATPase, V1 domain	IEP	Predict GO terms from Neighborhoods
CC	GO:0000325	plant-type vacuole	IEP	Predict GO terms from Neighborhoods
CC	GO:0000329	fungal-type vacuole membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0000956	nuclear-transcribed mRNA catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0001889	liver development	IEP	Predict GO terms from Neighborhoods
BP	GO:0002181	cytoplasmic translation	IEP	Predict GO terms from Neighborhoods
BP	GO:0002184	cytoplasmic translational termination	IEP	Predict GO terms from Neighborhoods
MF	GO:0003723	RNA binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0003729	mRNA binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0003747	translation release factor activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004618	phosphoglycerate kinase activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0005751	mitochondrial respiratory chain complex IV	IEP	Predict GO terms from Neighborhoods
CC	GO:0005774	vacuolar membrane	IEP	Predict GO terms from Neighborhoods
CC	GO:0005929	cilium	IEP	Predict GO terms from Neighborhoods
BP	GO:0006006	glucose metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006090	pyruvate metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006091	generation of precursor metabolites and energy	IEP	Predict GO terms from Neighborhoods
BP	GO:0006094	gluconeogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0006096	glycolytic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006123	mitochondrial electron transport, cytochrome c to oxygen	IEP	Predict GO terms from Neighborhoods
BP	GO:0006139	nucleobase-containing compound metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006165	nucleoside diphosphate phosphorylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0006401	RNA catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006402	mRNA catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006415	translational termination	IEP	Predict GO terms from Neighborhoods
BP	GO:0006449	regulation of translational termination	IEP	Predict GO terms from Neighborhoods
BP	GO:0006479	protein methylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0006643	membrane lipid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006664	glycolipid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006757	ATP generation from ADP	IEP	Predict GO terms from Neighborhoods
BP	GO:0006885	regulation of pH	IEP	Predict GO terms from Neighborhoods
BP	GO:0006892	post-Golgi vesicle-mediated transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0006896	Golgi to vacuole transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0006913	nucleocytoplasmic transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0007035	vacuolar acidification	IEP	Predict GO terms from Neighborhoods
MF	GO:0008079	translation termination factor activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0008135	translation factor activity, RNA binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0008213	protein alkylation	IEP	Predict GO terms from Neighborhoods
MF	GO:0008395	steroid hydroxylase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0008553	P-type proton-exporting transporter activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0009056	catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009057	macromolecule catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009060	aerobic respiration	IEP	Predict GO terms from Neighborhoods
BP	GO:0009132	nucleoside diphosphate metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009135	purine nucleoside diphosphate metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009141	nucleoside triphosphate metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009144	purine nucleoside triphosphate metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009179	purine ribonucleoside diphosphate metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009185	ribonucleoside diphosphate metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009199	ribonucleoside triphosphate metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009205	purine ribonucleoside triphosphate metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009247	glycolipid biosynthetic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0009678	pyrophosphate hydrolysis-driven proton transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0010268	brassinosteroid homeostasis	IEP	Predict GO terms from Neighborhoods
BP	GO:0010506	regulation of autophagy	IEP	Predict GO terms from Neighborhoods
MF	GO:0015662	P-type ion transporter activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0015935	small ribosomal subunit	IEP	Predict GO terms from Neighborhoods
BP	GO:0015980	energy derivation by oxidation of organic compounds	IEP	Predict GO terms from Neighborhoods
CC	GO:0016020	membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0016128	phytosteroid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0016131	brassinosteroid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0016134	saponin metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0016135	saponin biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0016138	glycoside biosynthetic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0016149	translation release factor activity, codon specific	IEP	Predict GO terms from Neighborhoods
BP	GO:0016241	regulation of macroautophagy	IEP	Predict GO terms from Neighborhoods
CC	GO:0016469	proton-transporting two-sector ATPase complex	IEP	Predict GO terms from Neighborhoods
MF	GO:0016634	oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor	IEP	Predict GO terms from Neighborhoods
MF	GO:0016774	phosphotransferase activity, carboxyl group as acceptor	IEP	Predict GO terms from Neighborhoods
CC	GO:0018444	translation release factor complex	IEP	Predict GO terms from Neighborhoods
BP	GO:0019253	reductive pentose-phosphate cycle	IEP	Predict GO terms from Neighborhoods
BP	GO:0019318	hexose metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0019319	hexose biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0019374	galactolipid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0019375	galactolipid biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0019538	protein metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0019646	aerobic electron transport chain	IEP	Predict GO terms from Neighborhoods
BP	GO:0019685	photosynthesis, dark reaction	IEP	Predict GO terms from Neighborhoods
MF	GO:0019829	ATPase-coupled cation transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0022627	cytosolic small ribosomal subunit	IEP	Predict GO terms from Neighborhoods
BP	GO:0022900	electron transport chain	IEP	Predict GO terms from Neighborhoods
BP	GO:0022904	respiratory electron transport chain	IEP	Predict GO terms from Neighborhoods
BP	GO:0030004	cellular monovalent inorganic cation homeostasis	IEP	Predict GO terms from Neighborhoods
BP	GO:0030031	cell projection assembly	IEP	Predict GO terms from Neighborhoods
BP	GO:0030641	regulation of cellular pH	IEP	Predict GO terms from Neighborhoods
CC	GO:0030667	secretory granule membrane	IEP	Predict GO terms from Neighborhoods
CC	GO:0031090	organelle membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0031099	regeneration	IEP	Predict GO terms from Neighborhoods
BP	GO:0031100	animal organ regeneration	IEP	Predict GO terms from Neighborhoods
BP	GO:0031503	protein-containing complex localization	IEP	Predict GO terms from Neighborhoods
BP	GO:0032984	protein-containing complex disassembly	IEP	Predict GO terms from Neighborhoods
CC	GO:0033176	proton-transporting V-type ATPase complex	IEP	Predict GO terms from Neighborhoods
CC	GO:0033178	proton-transporting two-sector ATPase complex, catalytic domain	IEP	Predict GO terms from Neighborhoods
CC	GO:0033180	proton-transporting V-type ATPase, V1 domain	IEP	Predict GO terms from Neighborhoods
CC	GO:0033181	plasma membrane proton-transporting V-type ATPase complex	IEP	Predict GO terms from Neighborhoods
BP	GO:0033750	ribosome localization	IEP	Predict GO terms from Neighborhoods
CC	GO:0035579	specific granule membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0035834	indole alkaloid metabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0042625	ATPase-coupled ion transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0042788	polysomal ribosome	IEP	Predict GO terms from Neighborhoods
MF	GO:0043021	ribonucleoprotein complex binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0043022	ribosome binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0043170	macromolecule metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0043244	regulation of protein-containing complex disassembly	IEP	Predict GO terms from Neighborhoods
MF	GO:0043531	ADP binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0043933	protein-containing complex organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0044238	primary metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0044260	cellular macromolecule metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0044265	cellular macromolecule catabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0044769	ATPase activity, coupled to transmembrane movement of ions, rotational mechanism	IEP	Predict GO terms from Neighborhoods
BP	GO:0044782	cilium organization	IEP	Predict GO terms from Neighborhoods
CC	GO:0045277	respiratory chain complex IV	IEP	Predict GO terms from Neighborhoods
BP	GO:0045333	cellular respiration	IEP	Predict GO terms from Neighborhoods
BP	GO:0046031	ADP metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0046034	ATP metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0046364	monosaccharide biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0046467	membrane lipid biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0046907	intracellular transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0046939	nucleotide phosphorylation	IEP	Predict GO terms from Neighborhoods
MF	GO:0046961	proton-transporting ATPase activity, rotational mechanism	IEP	Predict GO terms from Neighborhoods
BP	GO:0048732	gland development	IEP	Predict GO terms from Neighborhoods
MF	GO:0050595	7-deoxyloganin 7-hydroxylase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0050616	secologanin synthase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0050897	cobalt ion binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0051168	nuclear export	IEP	Predict GO terms from Neighborhoods
BP	GO:0051169	nuclear transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0051452	intracellular pH reduction	IEP	Predict GO terms from Neighborhoods
BP	GO:0051453	regulation of intracellular pH	IEP	Predict GO terms from Neighborhoods
BP	GO:0051649	establishment of localization in cell	IEP	Predict GO terms from Neighborhoods
MF	GO:0055105	ubiquitin-protein transferase inhibitor activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0055106	ubiquitin-protein transferase regulator activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0060271	cilium assembly	IEP	Predict GO terms from Neighborhoods
BP	GO:0061512	protein localization to cilium	IEP	Predict GO terms from Neighborhoods
CC	GO:0070069	cytochrome complex	IEP	Predict GO terms from Neighborhoods
MF	GO:0090079	translation regulator activity, nucleic acid binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0097371	MDM2/MDM4 family protein binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0097421	liver regeneration	IEP	Predict GO terms from Neighborhoods
CC	GO:0098554	cytoplasmic side of endoplasmic reticulum membrane	IEP	Predict GO terms from Neighborhoods
CC	GO:0098556	cytoplasmic side of rough endoplasmic reticulum membrane	IEP	Predict GO terms from Neighborhoods
CC	GO:0098562	cytoplasmic side of membrane	IEP	Predict GO terms from Neighborhoods
CC	GO:0098588	bounding membrane of organelle	IEP	Predict GO terms from Neighborhoods
CC	GO:0098796	membrane protein complex	IEP	Predict GO terms from Neighborhoods
CC	GO:0098797	plasma membrane protein complex	IEP	Predict GO terms from Neighborhoods
CC	GO:0098798	mitochondrial protein-containing complex	IEP	Predict GO terms from Neighborhoods
CC	GO:0098800	inner mitochondrial membrane protein complex	IEP	Predict GO terms from Neighborhoods
CC	GO:0098803	respiratory chain complex	IEP	Predict GO terms from Neighborhoods
CC	GO:0098852	lytic vacuole membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0120031	plasma membrane bounded cell projection assembly	IEP	Predict GO terms from Neighborhoods
MF	GO:0140358	P-type transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
BP	GO:1901135	carbohydrate derivative metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1901137	carbohydrate derivative biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1901575	organic substance catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1901796	regulation of signal transduction by p53 class mediator	IEP	Predict GO terms from Neighborhoods
BP	GO:1901798	positive regulation of signal transduction by p53 class mediator	IEP	Predict GO terms from Neighborhoods
BP	GO:1902600	proton transmembrane transport	IEP	Predict GO terms from Neighborhoods
BP	GO:1903509	liposaccharide metabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:1990825	sequence-specific mRNA binding	IEP	Predict GO terms from Neighborhoods
MF	GO:1990948	ubiquitin ligase inhibitor activity	IEP	Predict GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR002180	LS/RS	87	224
IPR036467	LS/RS_sf	79	225
IPR034964	LS	88	223

External Links

No external refs found!

SOLTUB.AGRIA.G00000041974

Expression Profile

Co-expression Networks

Functional Annotation