SOLTUB.AGRIA.G00000041977

Description : Pyrimidine-specific ribonucleoside hydrolase rihA

Gene families : OG_02_0001309 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000041977
Cluster	HCCA Clusters (HRR 50 & PCC 0.5): Cluster_133

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	AHRD
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005829	cytosol	IEA	AHRD
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006148	inosine catabolic process	IEA	AHRD
BP	GO:0006152	purine nucleoside catabolic process	None	Extended
BP	GO:0006213	pyrimidine nucleoside metabolic process	None	Extended
BP	GO:0006218	uridine catabolic process	IEA	AHRD
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008194	UDP-glycosyltransferase activity	None	Extended
MF	GO:0008477	purine nucleosidase activity	None	Extended
BP	GO:0009056	catabolic process	None	Extended
BP	GO:0009116	nucleoside metabolic process	None	Extended
BP	GO:0009119	ribonucleoside metabolic process	None	Extended
BP	GO:0009164	nucleoside catabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010150	leaf senescence	IEA	AHRD
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016757	glycosyltransferase activity	None	Extended
MF	GO:0016758	hexosyltransferase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	None	Extended
MF	GO:0016799	hydrolase activity, hydrolyzing N-glycosyl compounds	None	Extended
BP	GO:0019439	aromatic compound catabolic process	None	Extended
BP	GO:0032502	developmental process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034655	nucleobase-containing compound catabolic process	None	Extended
BP	GO:0034656	nucleobase-containing small molecule catabolic process	None	Extended
MF	GO:0035251	UDP-glucosyltransferase activity	IEA	AHRD
BP	GO:0042278	purine nucleoside metabolic process	None	Extended
BP	GO:0042454	ribonucleoside catabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044248	cellular catabolic process	None	Extended
BP	GO:0044270	cellular nitrogen compound catabolic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0044282	small molecule catabolic process	None	Extended
MF	GO:0045437	uridine nucleosidase activity	IEA	AHRD
BP	GO:0046102	inosine metabolic process	None	Extended
BP	GO:0046108	uridine metabolic process	None	Extended
BP	GO:0046128	purine ribonucleoside metabolic process	None	Extended
BP	GO:0046130	purine ribonucleoside catabolic process	None	Extended
BP	GO:0046131	pyrimidine ribonucleoside metabolic process	None	Extended
BP	GO:0046133	pyrimidine ribonucleoside catabolic process	None	Extended
BP	GO:0046135	pyrimidine nucleoside catabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
MF	GO:0046527	glucosyltransferase activity	None	Extended
BP	GO:0046700	heterocycle catabolic process	None	Extended
MF	GO:0047622	adenosine nucleosidase activity	IEA	AHRD
MF	GO:0047724	inosine nucleosidase activity	IEA	AHRD
MF	GO:0050263	ribosylpyrimidine nucleosidase activity	None	Extended
BP	GO:0055086	nucleobase-containing small molecule metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0072521	purine-containing compound metabolic process	None	Extended
BP	GO:0072523	purine-containing compound catabolic process	None	Extended
BP	GO:0072527	pyrimidine-containing compound metabolic process	None	Extended
BP	GO:0072529	pyrimidine-containing compound catabolic process	None	Extended
MF	GO:0072585	xanthosine nucleotidase activity	IEA	AHRD
BP	GO:0090693	plant organ senescence	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901135	carbohydrate derivative metabolic process	None	Extended
BP	GO:1901136	carbohydrate derivative catabolic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901361	organic cyclic compound catabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901565	organonitrogen compound catabolic process	None	Extended
BP	GO:1901575	organic substance catabolic process	None	Extended
BP	GO:1901657	glycosyl compound metabolic process	None	Extended
BP	GO:1901658	glycosyl compound catabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000976	transcription cis-regulatory region binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0001067	transcription regulatory region nucleic acid binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0003677	DNA binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0003682	chromatin binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0003690	double-stranded DNA binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0003700	DNA-binding transcription factor activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0006723	cuticle hydrocarbon biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006913	nucleocytoplasmic transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0006935	chemotaxis	IEP	Predict GO terms from Neighborhoods
BP	GO:0006952	defense response	IEP	Predict GO terms from Neighborhoods
BP	GO:0006970	response to osmotic stress	IEP	Predict GO terms from Neighborhoods
BP	GO:0007231	osmosensory signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0007275	multicellular organism development	IEP	Predict GO terms from Neighborhoods
BP	GO:0008272	sulfate transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0008285	negative regulation of cell population proliferation	IEP	Predict GO terms from Neighborhoods
BP	GO:0009292	horizontal gene transfer	IEP	Predict GO terms from Neighborhoods
BP	GO:0009294	DNA-mediated transformation	IEP	Predict GO terms from Neighborhoods
BP	GO:0009555	pollen development	IEP	Predict GO terms from Neighborhoods
BP	GO:0009605	response to external stimulus	IEP	Predict GO terms from Neighborhoods
BP	GO:0009606	tropism	IEP	Predict GO terms from Neighborhoods
BP	GO:0009608	response to symbiont	IEP	Predict GO terms from Neighborhoods
BP	GO:0009610	response to symbiotic fungus	IEP	Predict GO terms from Neighborhoods
BP	GO:0009612	response to mechanical stimulus	IEP	Predict GO terms from Neighborhoods
BP	GO:0009637	response to blue light	IEP	Predict GO terms from Neighborhoods
BP	GO:0009652	thigmotropism	IEP	Predict GO terms from Neighborhoods
BP	GO:0009785	blue light signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0009808	lignin metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009809	lignin biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009825	multidimensional cell growth	IEP	Predict GO terms from Neighborhoods
BP	GO:0009832	plant-type cell wall biogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0009834	plant-type secondary cell wall biogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0009891	positive regulation of biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009892	negative regulation of metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009970	cellular response to sulfate starvation	IEP	Predict GO terms from Neighborhoods
BP	GO:0010014	meristem initiation	IEP	Predict GO terms from Neighborhoods
BP	GO:0010091	trichome branching	IEP	Predict GO terms from Neighborhoods
BP	GO:0010183	pollen tube guidance	IEP	Predict GO terms from Neighborhoods
BP	GO:0010557	positive regulation of macromolecule biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0010604	positive regulation of macromolecule metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0010605	negative regulation of macromolecule metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0010769	regulation of cell morphogenesis involved in differentiation	IEP	Predict GO terms from Neighborhoods
BP	GO:0015698	inorganic anion transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0022414	reproductive process	IEP	Predict GO terms from Neighborhoods
BP	GO:0022603	regulation of anatomical structure morphogenesis	IEP	Predict GO terms from Neighborhoods
CC	GO:0030427	site of polarized growth	IEP	Predict GO terms from Neighborhoods
BP	GO:0030522	intracellular receptor signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0031325	positive regulation of cellular metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0031328	positive regulation of cellular biosynthetic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0031490	chromatin DNA binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0035017	cuticle pattern formation	IEP	Predict GO terms from Neighborhoods
CC	GO:0035838	growing cell tip	IEP	Predict GO terms from Neighborhoods
BP	GO:0035987	endodermal cell differentiation	IEP	Predict GO terms from Neighborhoods
BP	GO:0040011	locomotion	IEP	Predict GO terms from Neighborhoods
BP	GO:0042330	taxis	IEP	Predict GO terms from Neighborhoods
MF	GO:0042802	identical protein binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0043531	ADP binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0043565	sequence-specific DNA binding	IEP	Predict GO terms from Neighborhoods
CC	GO:0045177	apical part of cell	IEP	Predict GO terms from Neighborhoods
BP	GO:0045595	regulation of cell differentiation	IEP	Predict GO terms from Neighborhoods
BP	GO:0045596	negative regulation of cell differentiation	IEP	Predict GO terms from Neighborhoods
BP	GO:0045597	positive regulation of cell differentiation	IEP	Predict GO terms from Neighborhoods
BP	GO:0045834	positive regulation of lipid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0045893	positive regulation of DNA-templated transcription	IEP	Predict GO terms from Neighborhoods
BP	GO:0045935	positive regulation of nucleobase-containing compound metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0046889	positive regulation of lipid biosynthetic process	IEP	Predict GO terms from Neighborhoods
CC	GO:0048226	Casparian strip	IEP	Predict GO terms from Neighborhoods
BP	GO:0048229	gametophyte development	IEP	Predict GO terms from Neighborhoods
BP	GO:0048658	anther wall tapetum development	IEP	Predict GO terms from Neighborhoods
BP	GO:0050793	regulation of developmental process	IEP	Predict GO terms from Neighborhoods
BP	GO:0050826	response to freezing	IEP	Predict GO terms from Neighborhoods
BP	GO:0050896	response to stimulus	IEP	Predict GO terms from Neighborhoods
BP	GO:0050918	positive chemotaxis	IEP	Predict GO terms from Neighborhoods
MF	GO:0051019	mitogen-activated protein kinase binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0051093	negative regulation of developmental process	IEP	Predict GO terms from Neighborhoods
BP	GO:0051169	nuclear transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0051170	import into nucleus	IEP	Predict GO terms from Neighborhoods
BP	GO:0051173	positive regulation of nitrogen compound metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0051239	regulation of multicellular organismal process	IEP	Predict GO terms from Neighborhoods
BP	GO:0051254	positive regulation of RNA metabolic process	IEP	Predict GO terms from Neighborhoods
CC	GO:0051286	cell tip	IEP	Predict GO terms from Neighborhoods
BP	GO:0051510	regulation of unidimensional cell growth	IEP	Predict GO terms from Neighborhoods
BP	GO:0051716	cellular response to stimulus	IEP	Predict GO terms from Neighborhoods
CC	GO:0060187	cell pole	IEP	Predict GO terms from Neighborhoods
BP	GO:0070887	cellular response to chemical stimulus	IEP	Predict GO terms from Neighborhoods
BP	GO:0071214	cellular response to abiotic stimulus	IEP	Predict GO terms from Neighborhoods
BP	GO:0071365	cellular response to auxin stimulus	IEP	Predict GO terms from Neighborhoods
BP	GO:0071470	cellular response to osmotic stress	IEP	Predict GO terms from Neighborhoods
BP	GO:0071483	cellular response to blue light	IEP	Predict GO terms from Neighborhoods
BP	GO:0071554	cell wall organization or biogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0071669	plant-type cell wall organization or biogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0072348	sulfur compound transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0080091	regulation of raffinose metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0080092	regulation of pollen tube growth	IEP	Predict GO terms from Neighborhoods
CC	GO:0090404	pollen tube tip	IEP	Predict GO terms from Neighborhoods
BP	GO:0090506	axillary shoot meristem initiation	IEP	Predict GO terms from Neighborhoods
BP	GO:0104004	cellular response to environmental stimulus	IEP	Predict GO terms from Neighborhoods
MF	GO:0140110	transcription regulator activity	IEP	Predict GO terms from Neighborhoods
BP	GO:1901332	negative regulation of lateral root development	IEP	Predict GO terms from Neighborhoods
BP	GO:1901957	regulation of cutin biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1902680	positive regulation of RNA biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1903338	regulation of cell wall organization or biogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:1903508	positive regulation of nucleic acid-templated transcription	IEP	Predict GO terms from Neighborhoods
BP	GO:1904276	regulation of wax biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1904278	positive regulation of wax biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1905421	regulation of plant organ morphogenesis	IEP	Predict GO terms from Neighborhoods
MF	GO:1990837	sequence-specific double-stranded DNA binding	IEP	Predict GO terms from Neighborhoods
BP	GO:2000023	regulation of lateral root development	IEP	Predict GO terms from Neighborhoods
BP	GO:2000067	regulation of root morphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:2000069	regulation of post-embryonic root development	IEP	Predict GO terms from Neighborhoods
BP	GO:2000241	regulation of reproductive process	IEP	Predict GO terms from Neighborhoods
BP	GO:2000280	regulation of root development	IEP	Predict GO terms from Neighborhoods
BP	GO:2000652	regulation of secondary cell wall biogenesis	IEP	Predict GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR036452	Ribo_hydro-like	6	247
IPR001910	Inosine/uridine_hydrolase_dom	138	240
IPR001910	Inosine/uridine_hydrolase_dom	6	139

External Links

No external refs found!

SOLTUB.AGRIA.G00000041977

Expression Profile

Co-expression Networks

Functional Annotation