SOLTUB.AGRIA.G00000004173

Description : ATP-dependent Clp protease proteolytic subunit

Gene families : OG_02_0007713 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000004173
Cluster	HCCA Clusters (HRR 50 & PCC 0.5): Cluster_50

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004175	endopeptidase activity	None	Extended
MF	GO:0004176	ATP-dependent peptidase activity	IEA	AHRD
MF	GO:0004252	serine-type endopeptidase activity	IEA	AHRD
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005622	intracellular anatomical structure	None	Extended
BP	GO:0006508	proteolysis	None	Extended
BP	GO:0006515	protein quality control for misfolded or incompletely synthesized proteins	IEA	AHRD
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008233	peptidase activity	None	Extended
MF	GO:0008236	serine-type peptidase activity	None	Extended
CC	GO:0009368	endopeptidase Clp complex	None	Extended
CC	GO:0009526	plastid envelope	None	Extended
CC	GO:0009534	chloroplast thylakoid	IEA	AHRD
CC	GO:0009579	thylakoid	None	Extended
CC	GO:0009840	chloroplastic endopeptidase Clp complex	IEA	AHRD
CC	GO:0009941	chloroplast envelope	IEA	AHRD
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0017171	serine hydrolase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0019899	enzyme binding	None	Extended
CC	GO:0031967	organelle envelope	None	Extended
CC	GO:0031975	envelope	None	Extended
CC	GO:0031976	plastid thylakoid	None	Extended
CC	GO:0031984	organelle subcompartment	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
MF	GO:0051117	ATPase binding	IEA	AHRD
BP	GO:0051603	proteolysis involved in protein catabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
MF	GO:0140657	ATP-dependent activity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
CC	GO:1902494	catalytic complex	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000741	karyogamy	IEP	Predict GO terms from Neighborhoods
MF	GO:0001228	DNA-binding transcription activator activity, RNA polymerase II-specific	IEP	Predict GO terms from Neighborhoods
BP	GO:0001525	angiogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0001742	oenocyte differentiation	IEP	Predict GO terms from Neighborhoods
BP	GO:0002089	lens morphogenesis in camera-type eye	IEP	Predict GO terms from Neighborhoods
MF	GO:0003785	actin monomer binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0006110	regulation of glycolytic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006140	regulation of nucleotide metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0007379	segment specification	IEP	Predict GO terms from Neighborhoods
BP	GO:0007380	specification of segmental identity, head	IEP	Predict GO terms from Neighborhoods
BP	GO:0007422	peripheral nervous system development	IEP	Predict GO terms from Neighborhoods
BP	GO:0007476	imaginal disc-derived wing morphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0007480	imaginal disc-derived leg morphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0007626	locomotory behavior	IEP	Predict GO terms from Neighborhoods
MF	GO:0008685	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0009240	isopentenyl diphosphate biosynthetic process	IEP	Predict GO terms from Neighborhoods
CC	GO:0009532	plastid stroma	IEP	Predict GO terms from Neighborhoods
CC	GO:0009570	chloroplast stroma	IEP	Predict GO terms from Neighborhoods
BP	GO:0009668	plastid membrane organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0009886	post-embryonic animal morphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0009954	proximal/distal pattern formation	IEP	Predict GO terms from Neighborhoods
BP	GO:0010027	thylakoid membrane organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0010076	maintenance of floral meristem identity	IEP	Predict GO terms from Neighborhoods
BP	GO:0010077	maintenance of inflorescence meristem identity	IEP	Predict GO terms from Neighborhoods
BP	GO:0010154	fruit development	IEP	Predict GO terms from Neighborhoods
BP	GO:0010190	cytochrome b6f complex assembly	IEP	Predict GO terms from Neighborhoods
BP	GO:0010197	polar nucleus fusion	IEP	Predict GO terms from Neighborhoods
BP	GO:0010201	response to continuous far red light stimulus by the high-irradiance response system	IEP	Predict GO terms from Neighborhoods
BP	GO:0010223	secondary shoot formation	IEP	Predict GO terms from Neighborhoods
BP	GO:0010346	shoot axis formation	IEP	Predict GO terms from Neighborhoods
BP	GO:0010453	regulation of cell fate commitment	IEP	Predict GO terms from Neighborhoods
CC	GO:0015629	actin cytoskeleton	IEP	Predict GO terms from Neighborhoods
BP	GO:0016226	iron-sulfur cluster assembly	IEP	Predict GO terms from Neighborhoods
MF	GO:0016671	oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	IEP	Predict GO terms from Neighborhoods
BP	GO:0017004	cytochrome complex assembly	IEP	Predict GO terms from Neighborhoods
BP	GO:0019288	isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0019682	glyceraldehyde-3-phosphate metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0030097	hemopoiesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0031163	metallo-sulfur cluster assembly	IEP	Predict GO terms from Neighborhoods
CC	GO:0031977	thylakoid lumen	IEP	Predict GO terms from Neighborhoods
BP	GO:0035107	appendage morphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0035114	imaginal disc-derived appendage morphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0035120	post-embryonic appendage morphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0035855	megakaryocyte development	IEP	Predict GO terms from Neighborhoods
BP	GO:0042659	regulation of cell fate specification	IEP	Predict GO terms from Neighborhoods
MF	GO:0043424	protein histidine kinase binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0043470	regulation of carbohydrate catabolic process	IEP	Predict GO terms from Neighborhoods
CC	GO:0045171	intercellular bridge	IEP	Predict GO terms from Neighborhoods
BP	GO:0045637	regulation of myeloid cell differentiation	IEP	Predict GO terms from Neighborhoods
BP	GO:0045638	negative regulation of myeloid cell differentiation	IEP	Predict GO terms from Neighborhoods
BP	GO:0045664	regulation of neuron differentiation	IEP	Predict GO terms from Neighborhoods
BP	GO:0045665	negative regulation of neuron differentiation	IEP	Predict GO terms from Neighborhoods
BP	GO:0045821	positive regulation of glycolytic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0045913	positive regulation of carbohydrate metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0045981	positive regulation of nucleotide metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0046490	isopentenyl diphosphate metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0046620	regulation of organ growth	IEP	Predict GO terms from Neighborhoods
BP	GO:0046621	negative regulation of organ growth	IEP	Predict GO terms from Neighborhoods
BP	GO:0048363	mucilage pectin metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0048457	floral whorl morphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0048735	haltere morphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0055021	regulation of cardiac muscle tissue growth	IEP	Predict GO terms from Neighborhoods
BP	GO:0055022	negative regulation of cardiac muscle tissue growth	IEP	Predict GO terms from Neighborhoods
BP	GO:0060043	regulation of cardiac muscle cell proliferation	IEP	Predict GO terms from Neighborhoods
BP	GO:0060044	negative regulation of cardiac muscle cell proliferation	IEP	Predict GO terms from Neighborhoods
BP	GO:0060216	definitive hemopoiesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0060323	head morphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0060420	regulation of heart growth	IEP	Predict GO terms from Neighborhoods
BP	GO:0060429	epithelium development	IEP	Predict GO terms from Neighborhoods
BP	GO:0061117	negative regulation of heart growth	IEP	Predict GO terms from Neighborhoods
BP	GO:0061326	renal tubule development	IEP	Predict GO terms from Neighborhoods
BP	GO:0061515	myeloid cell development	IEP	Predict GO terms from Neighborhoods
BP	GO:0070372	regulation of ERK1 and ERK2 cascade	IEP	Predict GO terms from Neighborhoods
BP	GO:0070374	positive regulation of ERK1 and ERK2 cascade	IEP	Predict GO terms from Neighborhoods
BP	GO:0072002	Malpighian tubule development	IEP	Predict GO terms from Neighborhoods
BP	GO:0080006	internode patterning	IEP	Predict GO terms from Neighborhoods
BP	GO:0098751	bone cell development	IEP	Predict GO terms from Neighborhoods
BP	GO:1900542	regulation of purine nucleotide metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1900544	positive regulation of purine nucleotide metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1903578	regulation of ATP metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1903580	positive regulation of ATP metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1903706	regulation of hemopoiesis	IEP	Predict GO terms from Neighborhoods
BP	GO:2000495	regulation of cell proliferation involved in compound eye morphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:2000497	positive regulation of cell proliferation involved in compound eye morphogenesis	IEP	Predict GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR001087	GDSL	40	283
IPR023562	ClpP/TepA	370	548
IPR029045	ClpP/crotonase-like_dom_sf	371	546

External Links

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SOLTUB.AGRIA.G00000004173

Expression Profile

Co-expression Networks

Functional Annotation