SOLTUB.AGRIA.G00000042102

Description : Cyclin dependent kinase inhibitor, putative

Gene families : OG_02_0011414 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000042102
Cluster	HCCA Clusters (HRR 50 & PCC 0.5): Cluster_36

Type	GO Term	Name	Evidence	Source
BP	GO:0000079	regulation of cyclin-dependent protein serine/threonine kinase activity	None	Extended
CC	GO:0001673	male germ cell nucleus	IEA	AHRD
BP	GO:0001932	regulation of protein phosphorylation	None	Extended
BP	GO:0001933	negative regulation of protein phosphorylation	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0004857	enzyme inhibitor activity	None	Extended
MF	GO:0004860	protein kinase inhibitor activity	None	Extended
MF	GO:0004861	cyclin-dependent protein serine/threonine kinase inhibitor activity	IEA	AHRD
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	None	Extended
CC	GO:0005654	nucleoplasm	IEA	AHRD
CC	GO:0005737	cytoplasm	IEA	AHRD
BP	GO:0006469	negative regulation of protein kinase activity	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009892	negative regulation of metabolic process	None	Extended
BP	GO:0010563	negative regulation of phosphorus metabolic process	None	Extended
BP	GO:0010605	negative regulation of macromolecule metabolic process	None	Extended
MF	GO:0016538	cyclin-dependent protein serine/threonine kinase regulator activity	None	Extended
MF	GO:0019207	kinase regulator activity	None	Extended
MF	GO:0019210	kinase inhibitor activity	None	Extended
BP	GO:0019220	regulation of phosphate metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
MF	GO:0019887	protein kinase regulator activity	None	Extended
MF	GO:0019899	enzyme binding	None	Extended
MF	GO:0019900	kinase binding	IEA	AHRD
MF	GO:0030234	enzyme regulator activity	None	Extended
MF	GO:0030291	protein serine/threonine kinase inhibitor activity	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031324	negative regulation of cellular metabolic process	None	Extended
BP	GO:0031399	regulation of protein modification process	None	Extended
BP	GO:0031400	negative regulation of protein modification process	None	Extended
BP	GO:0033673	negative regulation of kinase activity	None	Extended
BP	GO:0042325	regulation of phosphorylation	None	Extended
BP	GO:0042326	negative regulation of phosphorylation	None	Extended
CC	GO:0043073	germ cell nucleus	None	Extended
BP	GO:0043086	negative regulation of catalytic activity	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0043549	regulation of kinase activity	None	Extended
BP	GO:0044092	negative regulation of molecular function	None	Extended
BP	GO:0045736	negative regulation of cyclin-dependent protein serine/threonine kinase activity	IEA	AHRD
BP	GO:0045786	negative regulation of cell cycle	None	Extended
BP	GO:0045859	regulation of protein kinase activity	None	Extended
BP	GO:0045936	negative regulation of phosphate metabolic process	None	Extended
BP	GO:0048519	negative regulation of biological process	None	Extended
BP	GO:0048523	negative regulation of cellular process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050790	regulation of catalytic activity	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051172	negative regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051174	regulation of phosphorus metabolic process	None	Extended
BP	GO:0051246	regulation of protein metabolic process	None	Extended
BP	GO:0051248	negative regulation of protein metabolic process	None	Extended
BP	GO:0051338	regulation of transferase activity	None	Extended
BP	GO:0051348	negative regulation of transferase activity	None	Extended
BP	GO:0051726	regulation of cell cycle	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0065009	regulation of molecular function	None	Extended
BP	GO:0071900	regulation of protein serine/threonine kinase activity	None	Extended
BP	GO:0071901	negative regulation of protein serine/threonine kinase activity	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0098772	molecular function regulator activity	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1904029	regulation of cyclin-dependent protein kinase activity	None	Extended
BP	GO:1904030	negative regulation of cyclin-dependent protein kinase activity	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000463	maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)	IEP	Predict GO terms from Neighborhoods
BP	GO:0000470	maturation of LSU-rRNA	IEP	Predict GO terms from Neighborhoods
CC	GO:0000791	euchromatin	IEP	Predict GO terms from Neighborhoods
CC	GO:0000792	heterochromatin	IEP	Predict GO terms from Neighborhoods
MF	GO:0000987	cis-regulatory region sequence-specific DNA binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0001046	core promoter sequence-specific DNA binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0003676	nucleic acid binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0003682	chromatin binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0003723	RNA binding	IEP	Predict GO terms from Neighborhoods
CC	GO:0005657	replication fork	IEP	Predict GO terms from Neighborhoods
CC	GO:0005721	pericentric heterochromatin	IEP	Predict GO terms from Neighborhoods
BP	GO:0006004	fucose metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006139	nucleobase-containing compound metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006396	RNA processing	IEP	Predict GO terms from Neighborhoods
BP	GO:0006397	mRNA processing	IEP	Predict GO terms from Neighborhoods
BP	GO:0006482	protein demethylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0006513	protein monoubiquitination	IEP	Predict GO terms from Neighborhoods
BP	GO:0006694	steroid biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006725	cellular aromatic compound metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0007155	cell adhesion	IEP	Predict GO terms from Neighborhoods
BP	GO:0008203	cholesterol metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0008214	protein dealkylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0008300	isoprenoid catabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0008327	methyl-CpG binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0008380	RNA splicing	IEP	Predict GO terms from Neighborhoods
BP	GO:0009685	gibberellin metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009891	positive regulation of biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009960	endosperm development	IEP	Predict GO terms from Neighborhoods
BP	GO:0009963	positive regulation of flavonoid biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0010115	regulation of abscisic acid biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0010162	seed dormancy process	IEP	Predict GO terms from Neighborhoods
BP	GO:0010216	maintenance of DNA methylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0010226	response to lithium ion	IEP	Predict GO terms from Neighborhoods
BP	GO:0010371	regulation of gibberellin biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0010390	histone monoubiquitination	IEP	Predict GO terms from Neighborhoods
BP	GO:0010444	guard mother cell differentiation	IEP	Predict GO terms from Neighborhoods
BP	GO:0010557	positive regulation of macromolecule biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0010629	negative regulation of gene expression	IEP	Predict GO terms from Neighborhoods
BP	GO:0010911	regulation of isomerase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0010912	positive regulation of isomerase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0016070	RNA metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0016071	mRNA metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0016103	diterpenoid catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0016115	terpenoid catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0016126	sterol biosynthetic process	IEP	Predict GO terms from Neighborhoods
CC	GO:0016363	nuclear matrix	IEP	Predict GO terms from Neighborhoods
BP	GO:0016574	histone ubiquitination	IEP	Predict GO terms from Neighborhoods
BP	GO:0016577	histone demethylation	IEP	Predict GO terms from Neighborhoods
CC	GO:0016592	mediator complex	IEP	Predict GO terms from Neighborhoods
MF	GO:0019843	rRNA binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0022611	dormancy process	IEP	Predict GO terms from Neighborhoods
CC	GO:0030677	ribonuclease P complex	IEP	Predict GO terms from Neighborhoods
CC	GO:0030684	preribosome	IEP	Predict GO terms from Neighborhoods
BP	GO:0031048	small non-coding RNA-dependent heterochromatin formation	IEP	Predict GO terms from Neighborhoods
BP	GO:0031328	positive regulation of cellular biosynthetic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0031493	obsolete nucleosomal histone binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0031507	heterochromatin formation	IEP	Predict GO terms from Neighborhoods
BP	GO:0031539	positive regulation of anthocyanin metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0031540	regulation of anthocyanin biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0031542	positive regulation of anthocyanin biosynthetic process	IEP	Predict GO terms from Neighborhoods
CC	GO:0031934	mating-type region heterochromatin	IEP	Predict GO terms from Neighborhoods
MF	GO:0032451	demethylase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0032452	histone demethylase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0032453	histone H3-methyl-lysine-4 demethylase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0032781	positive regulation of ATP-dependent activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0032991	protein-containing complex	IEP	Predict GO terms from Neighborhoods
BP	GO:0033696	heterochromatin boundary formation	IEP	Predict GO terms from Neighborhoods
BP	GO:0034641	cellular nitrogen compound metabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0034647	histone H3-tri/di/monomethyl-lysine-4 demethylase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0034720	histone H3-K4 demethylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0034721	histone H3-K4 demethylation, trimethyl-H3-K4-specific	IEP	Predict GO terms from Neighborhoods
BP	GO:0034756	regulation of iron ion transport	IEP	Predict GO terms from Neighborhoods
CC	GO:0035061	interchromatin granule	IEP	Predict GO terms from Neighborhoods
MF	GO:0035064	methylated histone binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0042254	ribosome biogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0043170	macromolecule metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0043462	regulation of ATP-dependent activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0044238	primary metabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0044729	hemi-methylated DNA-binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0045487	gibberellin catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0045814	negative regulation of gene expression, epigenetic	IEP	Predict GO terms from Neighborhoods
BP	GO:0045893	positive regulation of DNA-templated transcription	IEP	Predict GO terms from Neighborhoods
BP	GO:0045935	positive regulation of nucleobase-containing compound metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0045944	positive regulation of transcription by RNA polymerase II	IEP	Predict GO terms from Neighborhoods
BP	GO:0046483	heterocycle metabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0047012	sterol-4-alpha-carboxylate 3-dehydrogenase (decarboxylating) activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0048189	Lid2 complex	IEP	Predict GO terms from Neighborhoods
BP	GO:0048317	seed morphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0048658	anther wall tapetum development	IEP	Predict GO terms from Neighborhoods
BP	GO:0050678	regulation of epithelial cell proliferation	IEP	Predict GO terms from Neighborhoods
BP	GO:0051254	positive regulation of RNA metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0052325	cell wall pectin biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0052546	cell wall pectin metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0070076	histone lysine demethylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0070828	heterochromatin organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0070988	demethylation	IEP	Predict GO terms from Neighborhoods
CC	GO:0071011	precatalytic spliceosome	IEP	Predict GO terms from Neighborhoods
BP	GO:0071704	organic substance metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0090304	nucleic acid metabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0140034	methylation-dependent protein binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0140457	protein demethylase activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0140513	nuclear protein-containing complex	IEP	Predict GO terms from Neighborhoods
BP	GO:1901360	organic cyclic compound metabolic process	IEP	Predict GO terms from Neighborhoods
CC	GO:1902555	endoribonuclease complex	IEP	Predict GO terms from Neighborhoods
BP	GO:1902652	secondary alcohol metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1902680	positive regulation of RNA biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1902930	regulation of alcohol biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1903508	positive regulation of nucleic acid-templated transcription	IEP	Predict GO terms from Neighborhoods
CC	GO:1905348	endonuclease complex	IEP	Predict GO terms from Neighborhoods
CC	GO:1990904	ribonucleoprotein complex	IEP	Predict GO terms from Neighborhoods
BP	GO:2000371	regulation of DNA topoisomerase (ATP-hydrolyzing) activity	IEP	Predict GO terms from Neighborhoods
BP	GO:2000373	positive regulation of DNA topoisomerase (ATP-hydrolyzing) activity	IEP	Predict GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR003175	CDI_dom	186	232

External Links

No external refs found!

SOLTUB.AGRIA.G00000042102

Expression Profile

Co-expression Networks

Functional Annotation