SOLTUB.AGRIA.G00000042116

Description : UBX domain-containing protein 1

Gene families : OG_02_0011407 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000042116
Cluster	HCCA Clusters (HRR 50 & PCC 0.5): Cluster_249

Type	GO Term	Name	Evidence	Source
MF	GO:0000224	peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase activity	IEA	AHRD
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005654	nucleoplasm	IEA	AHRD
CC	GO:0005765	lysosomal membrane	IEA	AHRD
CC	GO:0005774	vacuolar membrane	None	Extended
CC	GO:0005829	cytosol	IEA	AHRD
BP	GO:0006457	protein folding	IEA	AHRD
BP	GO:0006508	proteolysis	None	Extended
BP	GO:0006515	protein quality control for misfolded or incompletely synthesized proteins	IEA	AHRD
BP	GO:0006516	glycoprotein catabolic process	IEA	AHRD
BP	GO:0006517	protein deglycosylation	IEA	AHRD
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006914	autophagy	None	Extended
BP	GO:0007034	vacuolar transport	None	Extended
BP	GO:0007041	lysosomal transport	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008333	endosome to lysosome transport	None	Extended
BP	GO:0009056	catabolic process	None	Extended
BP	GO:0009057	macromolecule catabolic process	None	Extended
BP	GO:0009100	glycoprotein metabolic process	None	Extended
BP	GO:0009892	negative regulation of metabolic process	None	Extended
BP	GO:0009894	regulation of catabolic process	None	Extended
BP	GO:0009895	negative regulation of catabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
CC	GO:0010008	endosome membrane	None	Extended
BP	GO:0010466	negative regulation of peptidase activity	None	Extended
BP	GO:0010605	negative regulation of macromolecule metabolic process	None	Extended
CC	GO:0012506	vesicle membrane	None	Extended
CC	GO:0016020	membrane	None	Extended
BP	GO:0016192	vesicle-mediated transport	None	Extended
BP	GO:0016197	endosomal transport	None	Extended
BP	GO:0016236	macroautophagy	IEA	AHRD
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016810	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds	None	Extended
MF	GO:0016811	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
CC	GO:0019898	extrinsic component of membrane	IEA	AHRD
MF	GO:0019899	enzyme binding	None	Extended
BP	GO:0030162	regulation of proteolysis	None	Extended
BP	GO:0030163	protein catabolic process	None	Extended
CC	GO:0030425	dendrite	IEA	AHRD
CC	GO:0030659	cytoplasmic vesicle membrane	None	Extended
CC	GO:0031090	organelle membrane	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031324	negative regulation of cellular metabolic process	None	Extended
BP	GO:0031329	regulation of cellular catabolic process	None	Extended
BP	GO:0031330	negative regulation of cellular catabolic process	None	Extended
BP	GO:0031396	regulation of protein ubiquitination	None	Extended
BP	GO:0031397	negative regulation of protein ubiquitination	IEA	AHRD
BP	GO:0031399	regulation of protein modification process	None	Extended
BP	GO:0031400	negative regulation of protein modification process	None	Extended
MF	GO:0031593	polyubiquitin modification-dependent protein binding	None	Extended
MF	GO:0031625	ubiquitin protein ligase binding	IEA	AHRD
CC	GO:0031901	early endosome membrane	IEA	AHRD
CC	GO:0031902	late endosome membrane	IEA	AHRD
MF	GO:0032182	ubiquitin-like protein binding	None	Extended
BP	GO:0032434	regulation of proteasomal ubiquitin-dependent protein catabolic process	None	Extended
BP	GO:0032435	negative regulation of proteasomal ubiquitin-dependent protein catabolic process	IEA	AHRD
BP	GO:0032509	endosome transport via multivesicular body sorting pathway	None	Extended
BP	GO:0032510	endosome to lysosome transport via multivesicular body sorting pathway	IEA	AHRD
CC	GO:0032991	protein-containing complex	None	Extended
CC	GO:0034098	VCP-NPL4-UFD1 AAA ATPase complex	IEA	AHRD
BP	GO:0036211	protein modification process	None	Extended
MF	GO:0036435	K48-linked polyubiquitin modification-dependent protein binding	IEA	AHRD
BP	GO:0042176	regulation of protein catabolic process	None	Extended
BP	GO:0042177	negative regulation of protein catabolic process	None	Extended
CC	GO:0042995	cell projection	None	Extended
CC	GO:0043005	neuron projection	None	Extended
CC	GO:0043025	neuronal cell body	IEA	AHRD
BP	GO:0043086	negative regulation of catalytic activity	None	Extended
MF	GO:0043130	ubiquitin binding	IEA	AHRD
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044092	negative regulation of molecular function	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044248	cellular catabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044265	cellular macromolecule catabolic process	None	Extended
CC	GO:0044297	cell body	None	Extended
MF	GO:0044389	ubiquitin-like protein ligase binding	None	Extended
MF	GO:0044877	protein-containing complex binding	None	Extended
BP	GO:0045861	negative regulation of proteolysis	None	Extended
BP	GO:0046907	intracellular transport	None	Extended
BP	GO:0048519	negative regulation of biological process	None	Extended
BP	GO:0048523	negative regulation of cellular process	None	Extended
BP	GO:0048583	regulation of response to stimulus	None	Extended
BP	GO:0048585	negative regulation of response to stimulus	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050790	regulation of catalytic activity	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
MF	GO:0051117	ATPase binding	IEA	AHRD
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051172	negative regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051246	regulation of protein metabolic process	None	Extended
BP	GO:0051248	negative regulation of protein metabolic process	None	Extended
BP	GO:0051336	regulation of hydrolase activity	None	Extended
BP	GO:0051346	negative regulation of hydrolase activity	None	Extended
BP	GO:0051603	proteolysis involved in protein catabolic process	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0051649	establishment of localization in cell	None	Extended
BP	GO:0052547	regulation of peptidase activity	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0061136	regulation of proteasomal protein catabolic process	None	Extended
BP	GO:0061919	process utilizing autophagic mechanism	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0065009	regulation of molecular function	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0071796	K6-linked polyubiquitin modification-dependent protein binding	IEA	AHRD
BP	GO:0071985	multivesicular body sorting pathway	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
BP	GO:0080134	regulation of response to stress	None	Extended
BP	GO:0080135	regulation of cellular response to stress	None	Extended
BP	GO:0090085	regulation of protein deubiquitination	None	Extended
BP	GO:0090086	negative regulation of protein deubiquitination	None	Extended
CC	GO:0098588	bounding membrane of organelle	None	Extended
CC	GO:0098796	membrane protein complex	None	Extended
CC	GO:0098852	lytic vacuole membrane	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
CC	GO:0120025	plasma membrane bounded cell projection	None	Extended
MF	GO:0140030	modification-dependent protein binding	None	Extended
CC	GO:0140534	endoplasmic reticulum protein-containing complex	None	Extended
BP	GO:1901135	carbohydrate derivative metabolic process	None	Extended
BP	GO:1901136	carbohydrate derivative catabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901565	organonitrogen compound catabolic process	None	Extended
BP	GO:1901575	organic substance catabolic process	None	Extended
BP	GO:1901799	negative regulation of proteasomal protein catabolic process	None	Extended
BP	GO:1903050	regulation of proteolysis involved in protein catabolic process	None	Extended
BP	GO:1903051	negative regulation of proteolysis involved in protein catabolic process	None	Extended
BP	GO:1903093	regulation of protein K48-linked deubiquitination	None	Extended
BP	GO:1903094	negative regulation of protein K48-linked deubiquitination	IEA	AHRD
BP	GO:1903320	regulation of protein modification by small protein conjugation or removal	None	Extended
BP	GO:1903321	negative regulation of protein modification by small protein conjugation or removal	None	Extended
BP	GO:1903573	negative regulation of response to endoplasmic reticulum stress	None	Extended
BP	GO:1904292	regulation of ERAD pathway	None	Extended
BP	GO:1904293	negative regulation of ERAD pathway	IEA	AHRD
MF	GO:1904855	proteasome regulatory particle binding	IEA	AHRD
BP	GO:1905897	regulation of response to endoplasmic reticulum stress	None	Extended
BP	GO:2000058	regulation of ubiquitin-dependent protein catabolic process	None	Extended
BP	GO:2000059	negative regulation of ubiquitin-dependent protein catabolic process	None	Extended
BP	GO:2000152	regulation of ubiquitin-specific protease activity	None	Extended
BP	GO:2000157	negative regulation of ubiquitin-specific protease activity	IEA	AHRD

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Type	GO Term	Name	Evidence	Source
CC	GO:0000151	ubiquitin ligase complex	IEP	Predict GO terms from Neighborhoods
BP	GO:0006511	ubiquitin-dependent protein catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0008284	positive regulation of cell population proliferation	IEP	Predict GO terms from Neighborhoods
BP	GO:0009953	dorsal/ventral pattern formation	IEP	Predict GO terms from Neighborhoods
BP	GO:0010498	proteasomal protein catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0019941	modification-dependent protein catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0030111	regulation of Wnt signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0030177	positive regulation of Wnt signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0043161	proteasome-mediated ubiquitin-dependent protein catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0043632	modification-dependent macromolecule catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0048263	determination of dorsal identity	IEP	Predict GO terms from Neighborhoods
BP	GO:0060828	regulation of canonical Wnt signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0090263	positive regulation of canonical Wnt signaling pathway	IEP	Predict GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR036339	PUB-like_dom_sf	302	414
IPR015940	UBA	121	152
IPR018997	PUB_domain	324	395
IPR009060	UBA-like_sf	106	169

External Links

No external refs found!

SOLTUB.AGRIA.G00000042116

Expression Profile

Co-expression Networks

Functional Annotation