SOLTUB.AGRIA.G00000042547


Description : Rhomboid-like protein


Gene families : OG_02_0006135 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000042547
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_47


Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0000003 reproduction IEP Predict GO terms from Neighborhoods
MF GO:0004310 farnesyl-diphosphate farnesyltransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0004311 farnesyltranstransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0004659 prenyltransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0005319 lipid transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0005548 phospholipid transporter activity IEP Predict GO terms from Neighborhoods
CC GO:0005789 endoplasmic reticulum membrane IEP Predict GO terms from Neighborhoods
CC GO:0005886 plasma membrane IEP Predict GO terms from Neighborhoods
CC GO:0005911 cell-cell junction IEP Predict GO terms from Neighborhoods
BP GO:0006468 protein phosphorylation IEP Predict GO terms from Neighborhoods
BP GO:0006694 steroid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0006695 cholesterol biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0006722 triterpenoid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006793 phosphorus metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006796 phosphate-containing compound metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006955 immune response IEP Predict GO terms from Neighborhoods
BP GO:0006971 hypotonic response IEP Predict GO terms from Neighborhoods
BP GO:0008203 cholesterol metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0008219 cell death IEP Predict GO terms from Neighborhoods
BP GO:0008356 asymmetric cell division IEP Predict GO terms from Neighborhoods
CC GO:0009505 plant-type cell wall IEP Predict GO terms from Neighborhoods
CC GO:0009506 plasmodesma IEP Predict GO terms from Neighborhoods
BP GO:0009605 response to external stimulus IEP Predict GO terms from Neighborhoods
BP GO:0009607 response to biotic stimulus IEP Predict GO terms from Neighborhoods
BP GO:0009612 response to mechanical stimulus IEP Predict GO terms from Neighborhoods
BP GO:0009751 response to salicylic acid IEP Predict GO terms from Neighborhoods
BP GO:0009987 cellular process IEP Predict GO terms from Neighborhoods
BP GO:0010065 primary meristem tissue development IEP Predict GO terms from Neighborhoods
BP GO:0010068 protoderm histogenesis IEP Predict GO terms from Neighborhoods
BP GO:0010152 pollen maturation IEP Predict GO terms from Neighborhoods
BP GO:0010183 pollen tube guidance IEP Predict GO terms from Neighborhoods
BP GO:0010799 regulation of peptidyl-threonine phosphorylation IEP Predict GO terms from Neighborhoods
BP GO:0010800 positive regulation of peptidyl-threonine phosphorylation IEP Predict GO terms from Neighborhoods
CC GO:0015630 microtubule cytoskeleton IEP Predict GO terms from Neighborhoods
BP GO:0015748 organophosphate ester transport IEP Predict GO terms from Neighborhoods
BP GO:0015914 phospholipid transport IEP Predict GO terms from Neighborhoods
CC GO:0016020 membrane IEP Predict GO terms from Neighborhoods
CC GO:0016021 integral component of membrane IEP Predict GO terms from Neighborhoods
BP GO:0016104 triterpenoid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0016125 sterol metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0016126 sterol biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0016134 saponin metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0016135 saponin biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0016310 phosphorylation IEP Predict GO terms from Neighborhoods
MF GO:0016740 transferase activity IEP Predict GO terms from Neighborhoods
MF GO:0019207 kinase regulator activity IEP Predict GO terms from Neighborhoods
MF GO:0019209 kinase activator activity IEP Predict GO terms from Neighborhoods
BP GO:0019538 protein metabolic process IEP Predict GO terms from Neighborhoods
MF GO:0019887 protein kinase regulator activity IEP Predict GO terms from Neighborhoods
MF GO:0019900 kinase binding IEP Predict GO terms from Neighborhoods
BP GO:0019954 asexual reproduction IEP Predict GO terms from Neighborhoods
CC GO:0030054 cell junction IEP Predict GO terms from Neighborhoods
MF GO:0030295 protein kinase activator activity IEP Predict GO terms from Neighborhoods
BP GO:0030436 asexual sporulation IEP Predict GO terms from Neighborhoods
BP GO:0030447 filamentous growth IEP Predict GO terms from Neighborhoods
BP GO:0030448 hyphal growth IEP Predict GO terms from Neighborhoods
CC GO:0031224 intrinsic component of membrane IEP Predict GO terms from Neighborhoods
CC GO:0031983 vesicle lumen IEP Predict GO terms from Neighborhoods
BP GO:0032147 activation of protein kinase activity IEP Predict GO terms from Neighborhoods
BP GO:0032410 negative regulation of transporter activity IEP Predict GO terms from Neighborhoods
BP GO:0032413 negative regulation of ion transmembrane transporter activity IEP Predict GO terms from Neighborhoods
BP GO:0033554 cellular response to stress IEP Predict GO terms from Neighborhoods
BP GO:0033674 positive regulation of kinase activity IEP Predict GO terms from Neighborhoods
BP GO:0034763 negative regulation of transmembrane transport IEP Predict GO terms from Neighborhoods
BP GO:0034766 negative regulation of ion transmembrane transport IEP Predict GO terms from Neighborhoods
CC GO:0034774 secretory granule lumen IEP Predict GO terms from Neighborhoods
BP GO:0035627 ceramide transport IEP Predict GO terms from Neighborhoods
CC GO:0035838 growing cell tip IEP Predict GO terms from Neighborhoods
BP GO:0036211 protein modification process IEP Predict GO terms from Neighborhoods
BP GO:0042177 negative regulation of protein catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0042546 cell wall biogenesis IEP Predict GO terms from Neighborhoods
BP GO:0043170 macromolecule metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0043207 response to external biotic stimulus IEP Predict GO terms from Neighborhoods
BP GO:0043266 regulation of potassium ion transport IEP Predict GO terms from Neighborhoods
BP GO:0043267 negative regulation of potassium ion transport IEP Predict GO terms from Neighborhoods
BP GO:0043271 negative regulation of ion transport IEP Predict GO terms from Neighborhoods
BP GO:0043412 macromolecule modification IEP Predict GO terms from Neighborhoods
MF GO:0043539 protein serine/threonine kinase activator activity IEP Predict GO terms from Neighborhoods
BP GO:0044085 cellular component biogenesis IEP Predict GO terms from Neighborhoods
BP GO:0044238 primary metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0044419 biological process involved in interspecies interaction between organisms IEP Predict GO terms from Neighborhoods
BP GO:0045087 innate immune response IEP Predict GO terms from Neighborhoods
BP GO:0045165 cell fate commitment IEP Predict GO terms from Neighborhoods
BP GO:0045338 farnesyl diphosphate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0045860 positive regulation of protein kinase activity IEP Predict GO terms from Neighborhoods
BP GO:0046165 alcohol biosynthetic process IEP Predict GO terms from Neighborhoods
MF GO:0046624 sphingolipid transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0046625 sphingolipid binding IEP Predict GO terms from Neighborhoods
BP GO:0046777 protein autophosphorylation IEP Predict GO terms from Neighborhoods
BP GO:0048315 conidium formation IEP Predict GO terms from Neighborhoods
BP GO:0048507 meristem development IEP Predict GO terms from Neighborhoods
BP GO:0048508 embryonic meristem development IEP Predict GO terms from Neighborhoods
BP GO:0048768 root hair cell tip growth IEP Predict GO terms from Neighborhoods
BP GO:0050896 response to stimulus IEP Predict GO terms from Neighborhoods
BP GO:0050918 positive chemotaxis IEP Predict GO terms from Neighborhoods
BP GO:0051707 response to other organism IEP Predict GO terms from Neighborhoods
BP GO:0051716 cellular response to stimulus IEP Predict GO terms from Neighborhoods
MF GO:0051996 squalene synthase activity IEP Predict GO terms from Neighborhoods
BP GO:0052546 cell wall pectin metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0055057 neuroblast division IEP Predict GO terms from Neighborhoods
BP GO:0055059 asymmetric neuroblast division IEP Predict GO terms from Neighborhoods
CC GO:0060205 cytoplasmic vesicle lumen IEP Predict GO terms from Neighborhoods
CC GO:0070161 anchoring junction IEP Predict GO terms from Neighborhoods
BP GO:0071214 cellular response to abiotic stimulus IEP Predict GO terms from Neighborhoods
BP GO:0071260 cellular response to mechanical stimulus IEP Predict GO terms from Neighborhoods
BP GO:0071476 cellular hypotonic response IEP Predict GO terms from Neighborhoods
BP GO:0071554 cell wall organization or biogenesis IEP Predict GO terms from Neighborhoods
BP GO:0071731 response to nitric oxide IEP Predict GO terms from Neighborhoods
BP GO:0071900 regulation of protein serine/threonine kinase activity IEP Predict GO terms from Neighborhoods
BP GO:0071902 positive regulation of protein serine/threonine kinase activity IEP Predict GO terms from Neighborhoods
CC GO:0090404 pollen tube tip IEP Predict GO terms from Neighborhoods
MF GO:0097001 ceramide binding IEP Predict GO terms from Neighborhoods
BP GO:0104004 cellular response to environmental stimulus IEP Predict GO terms from Neighborhoods
BP GO:0120009 intermembrane lipid transfer IEP Predict GO terms from Neighborhoods
MF GO:0120013 lipid transfer activity IEP Predict GO terms from Neighborhoods
MF GO:0120014 phospholipid transfer activity IEP Predict GO terms from Neighborhoods
MF GO:0120016 sphingolipid transfer activity IEP Predict GO terms from Neighborhoods
MF GO:0120017 ceramide transfer activity IEP Predict GO terms from Neighborhoods
MF GO:0140338 sphingomyelin transfer activity IEP Predict GO terms from Neighborhoods
BP GO:1900457 regulation of brassinosteroid mediated signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:1900459 positive regulation of brassinosteroid mediated signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:1901016 regulation of potassium ion transmembrane transporter activity IEP Predict GO terms from Neighborhoods
BP GO:1901017 negative regulation of potassium ion transmembrane transporter activity IEP Predict GO terms from Neighborhoods
BP GO:1901379 regulation of potassium ion transmembrane transport IEP Predict GO terms from Neighborhoods
BP GO:1901380 negative regulation of potassium ion transmembrane transport IEP Predict GO terms from Neighborhoods
MF GO:1902387 ceramide 1-phosphate binding IEP Predict GO terms from Neighborhoods
MF GO:1902388 ceramide 1-phosphate transfer activity IEP Predict GO terms from Neighborhoods
BP GO:1902438 response to vanadate(3-) IEP Predict GO terms from Neighborhoods
CC GO:1902554 serine/threonine protein kinase complex IEP Predict GO terms from Neighborhoods
BP GO:1902652 secondary alcohol metabolic process IEP Predict GO terms from Neighborhoods
BP GO:1902653 secondary alcohol biosynthetic process IEP Predict GO terms from Neighborhoods
CC GO:1902911 protein kinase complex IEP Predict GO terms from Neighborhoods
BP GO:1904063 negative regulation of cation transmembrane transport IEP Predict GO terms from Neighborhoods
CC GO:1904813 ficolin-1-rich granule lumen IEP Predict GO terms from Neighborhoods
BP GO:2000603 regulation of secondary growth IEP Predict GO terms from Neighborhoods
BP GO:2000605 positive regulation of secondary growth IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR022764 Peptidase_S54_rhomboid_dom 124 265
IPR035952 Rhomboid-like_sf 52 266
No external refs found!