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  5. SOLTUB.AGRIA.G00000042925

SOLTUB.AGRIA.G00000042925


Description : Nucleosome assembly protein 1;1


Gene families : OG_02_0001600 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000042925
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_159

Target Alias Description ECC score Gene Family Method Actions
SOLTUB.AGRIA.G00000018582 No alias Nucleosome assembly protein 1;1 0.2 Orthogroups with 8 Potato genotypes
SOLTUB.AGRIA.G00000018582 No alias Nucleosome assembly protein 1;1 0.2 Orthogroups with 8 Potato genotypes
SOLTUB.AGRIA.G00000018582 No alias Nucleosome assembly protein 1;1 0.2 Orthogroups with 8 Potato genotypes

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000724 double-strand break repair via homologous recombination IEP Predict GO terms from Neighborhoods
BP GO:0000725 recombinational repair IEP Predict GO terms from Neighborhoods
CC GO:0000785 chromatin IEP Predict GO terms from Neighborhoods
MF GO:0003682 chromatin binding IEP Predict GO terms from Neighborhoods
MF GO:0003735 structural constituent of ribosome IEP Predict GO terms from Neighborhoods
MF GO:0005198 structural molecule activity IEP Predict GO terms from Neighborhoods
CC GO:0005840 ribosome IEP Predict GO terms from Neighborhoods
BP GO:0006281 DNA repair IEP Predict GO terms from Neighborhoods
BP GO:0006302 double-strand break repair IEP Predict GO terms from Neighborhoods
BP GO:0006310 DNA recombination IEP Predict GO terms from Neighborhoods
BP GO:0006325 chromatin organization IEP Predict GO terms from Neighborhoods
BP GO:0006334 nucleosome assembly IEP Predict GO terms from Neighborhoods
BP GO:0006338 chromatin remodeling IEP Predict GO terms from Neighborhoods
BP GO:0006412 translation IEP Predict GO terms from Neighborhoods
BP GO:0006518 peptide metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0007399 nervous system development IEP Predict GO terms from Neighborhoods
BP GO:0008284 positive regulation of cell population proliferation IEP Predict GO terms from Neighborhoods
BP GO:0009292 horizontal gene transfer IEP Predict GO terms from Neighborhoods
BP GO:0009294 DNA-mediated transformation IEP Predict GO terms from Neighborhoods
BP GO:0016444 somatic cell DNA recombination IEP Predict GO terms from Neighborhoods
MF GO:0019843 rRNA binding IEP Predict GO terms from Neighborhoods
BP GO:0034641 cellular nitrogen compound metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0034728 nucleosome organization IEP Predict GO terms from Neighborhoods
MF GO:0042393 histone binding IEP Predict GO terms from Neighborhoods
BP GO:0043043 peptide biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0043604 amide biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0044260 cellular macromolecule metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0065004 protein-DNA complex assembly IEP Predict GO terms from Neighborhoods
BP GO:0071824 protein-DNA complex subunit organization IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR002164 NAP_family 9 246
IPR037231 NAP-like_sf 9 245
No external refs found!