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  5. SOLTUB.AGRIA.G00000042962

SOLTUB.AGRIA.G00000042962


Description : Rop guanine nucleotide exchange factor, putative


Gene families : OG_02_0016171 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000042962
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_39

Target Alias Description ECC score Gene Family Method Actions
SOLTUB.AGRIA.G00000028467 No alias Rop guanine nucleotide exchange factor, putative 0.2 Orthogroups with 8 Potato genotypes
SOLTUB.AGRIA.G00000028467 No alias Rop guanine nucleotide exchange factor, putative 0.2 Orthogroups with 8 Potato genotypes
SOLTUB.AGRIA.G00000028467 No alias Rop guanine nucleotide exchange factor, putative 0.2 Orthogroups with 8 Potato genotypes

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0003013 circulatory system process IEP Predict GO terms from Neighborhoods
BP GO:0003018 vascular process in circulatory system IEP Predict GO terms from Neighborhoods
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP Predict GO terms from Neighborhoods
CC GO:0005741 mitochondrial outer membrane IEP Predict GO terms from Neighborhoods
BP GO:0005975 carbohydrate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0005977 glycogen metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0005982 starch metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0005983 starch catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0005996 monosaccharide metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006029 proteoglycan metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006112 energy reserve metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006164 purine nucleotide biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0006766 vitamin metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006767 water-soluble vitamin metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0007005 mitochondrion organization IEP Predict GO terms from Neighborhoods
BP GO:0009059 macromolecule biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009100 glycoprotein metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009101 glycoprotein biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009110 vitamin biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009165 nucleotide biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009250 glucan biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009251 glucan catabolic process IEP Predict GO terms from Neighborhoods
CC GO:0009501 amyloplast IEP Predict GO terms from Neighborhoods
CC GO:0009531 secondary cell wall IEP Predict GO terms from Neighborhoods
CC GO:0009569 chloroplast starch grain IEP Predict GO terms from Neighborhoods
BP GO:0009660 amyloplast organization IEP Predict GO terms from Neighborhoods
BP GO:0009987 cellular process IEP Predict GO terms from Neighborhoods
BP GO:0010021 amylopectin biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0010232 vascular transport IEP Predict GO terms from Neighborhoods
BP GO:0010233 phloem transport IEP Predict GO terms from Neighborhoods
CC GO:0010368 chloroplast isoamylase complex IEP Predict GO terms from Neighborhoods
BP GO:0010769 regulation of cell morphogenesis involved in differentiation IEP Predict GO terms from Neighborhoods
BP GO:0015980 energy derivation by oxidation of organic compounds IEP Predict GO terms from Neighborhoods
BP GO:0016051 carbohydrate biosynthetic process IEP Predict GO terms from Neighborhoods
MF GO:0016854 racemase and epimerase activity IEP Predict GO terms from Neighborhoods
MF GO:0016857 racemase and epimerase activity, acting on carbohydrates and derivatives IEP Predict GO terms from Neighborhoods
BP GO:0018130 heterocycle biosynthetic process IEP Predict GO terms from Neighborhoods
MF GO:0019156 isoamylase activity IEP Predict GO terms from Neighborhoods
BP GO:0019252 starch biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0019750 chloroplast localization IEP Predict GO terms from Neighborhoods
BP GO:0019852 L-ascorbic acid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0019853 L-ascorbic acid biosynthetic process IEP Predict GO terms from Neighborhoods
CC GO:0019867 outer membrane IEP Predict GO terms from Neighborhoods
BP GO:0030166 proteoglycan biosynthetic process IEP Predict GO terms from Neighborhoods
MF GO:0030695 GTPase regulator activity IEP Predict GO terms from Neighborhoods
CC GO:0031968 organelle outer membrane IEP Predict GO terms from Neighborhoods
BP GO:0033500 carbohydrate homeostasis IEP Predict GO terms from Neighborhoods
BP GO:0034645 cellular macromolecule biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0042364 water-soluble vitamin biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0042631 cellular response to water deprivation IEP Predict GO terms from Neighborhoods
CC GO:0043033 isoamylase complex IEP Predict GO terms from Neighborhoods
CC GO:0043036 starch grain IEP Predict GO terms from Neighborhoods
BP GO:0043087 regulation of GTPase activity IEP Predict GO terms from Neighborhoods
BP GO:0044247 cellular polysaccharide catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0044275 cellular carbohydrate catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0046364 monosaccharide biosynthetic process IEP Predict GO terms from Neighborhoods
MF GO:0047918 GDP-mannose 3,5-epimerase activity IEP Predict GO terms from Neighborhoods
BP GO:0051099 positive regulation of binding IEP Predict GO terms from Neighborhoods
MF GO:0051287 NAD binding IEP Predict GO terms from Neighborhoods
BP GO:0051644 plastid localization IEP Predict GO terms from Neighborhoods
BP GO:0051646 mitochondrion localization IEP Predict GO terms from Neighborhoods
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Predict GO terms from Neighborhoods
BP GO:0071229 cellular response to acid chemical IEP Predict GO terms from Neighborhoods
BP GO:0071462 cellular response to water stimulus IEP Predict GO terms from Neighborhoods
BP GO:0072522 purine-containing compound biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0080092 regulation of pollen tube growth IEP Predict GO terms from Neighborhoods
BP GO:1901135 carbohydrate derivative metabolic process IEP Predict GO terms from Neighborhoods
BP GO:1901137 carbohydrate derivative biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1901293 nucleoside phosphate biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1901334 lactone metabolic process IEP Predict GO terms from Neighborhoods
BP GO:1901336 lactone biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1902347 response to strigolactone IEP Predict GO terms from Neighborhoods
BP GO:1904424 regulation of GTP binding IEP Predict GO terms from Neighborhoods
BP GO:1904426 positive regulation of GTP binding IEP Predict GO terms from Neighborhoods
BP GO:1905097 regulation of guanyl-nucleotide exchange factor activity IEP Predict GO terms from Neighborhoods
BP GO:1905099 positive regulation of guanyl-nucleotide exchange factor activity IEP Predict GO terms from Neighborhoods
BP GO:2000012 regulation of auxin polar transport IEP Predict GO terms from Neighborhoods
BP GO:2000896 amylopectin metabolic process IEP Predict GO terms from Neighborhoods
BP GO:2001108 positive regulation of Rho guanyl-nucleotide exchange factor activity IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR005512 PRONE_dom 115 472
No external refs found!