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  5. SOLTUB.AGRIA.G00000042964

SOLTUB.AGRIA.G00000042964


Description : histone H2A deubiquitinase (DUF3755)


Gene families : OG_02_0029061 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000042964
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_159


Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000266 mitochondrial fission IEP Predict GO terms from Neighborhoods
BP GO:0000919 cell plate assembly IEP Predict GO terms from Neighborhoods
BP GO:0002237 response to molecule of bacterial origin IEP Predict GO terms from Neighborhoods
BP GO:0003006 developmental process involved in reproduction IEP Predict GO terms from Neighborhoods
MF GO:0003924 GTPase activity IEP Predict GO terms from Neighborhoods
MF GO:0005525 GTP binding IEP Predict GO terms from Neighborhoods
CC GO:0005737 cytoplasm IEP Predict GO terms from Neighborhoods
CC GO:0005874 microtubule IEP Predict GO terms from Neighborhoods
CC GO:0005938 cell cortex IEP Predict GO terms from Neighborhoods
BP GO:0006886 intracellular protein transport IEP Predict GO terms from Neighborhoods
BP GO:0006897 endocytosis IEP Predict GO terms from Neighborhoods
BP GO:0006898 receptor-mediated endocytosis IEP Predict GO terms from Neighborhoods
BP GO:0006952 defense response IEP Predict GO terms from Neighborhoods
BP GO:0007005 mitochondrion organization IEP Predict GO terms from Neighborhoods
MF GO:0008017 microtubule binding IEP Predict GO terms from Neighborhoods
MF GO:0008092 cytoskeletal protein binding IEP Predict GO terms from Neighborhoods
BP GO:0009410 response to xenobiotic stimulus IEP Predict GO terms from Neighborhoods
CC GO:0009504 cell plate IEP Predict GO terms from Neighborhoods
CC GO:0009524 phragmoplast IEP Predict GO terms from Neighborhoods
CC GO:0009535 chloroplast thylakoid membrane IEP Predict GO terms from Neighborhoods
BP GO:0009607 response to biotic stimulus IEP Predict GO terms from Neighborhoods
BP GO:0009626 plant-type hypersensitive response IEP Predict GO terms from Neighborhoods
BP GO:0009753 response to jasmonic acid IEP Predict GO terms from Neighborhoods
BP GO:0009862 systemic acquired resistance, salicylic acid mediated signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0009863 salicylic acid mediated signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0009909 regulation of flower development IEP Predict GO terms from Neighborhoods
BP GO:0009920 cell plate formation involved in plant-type cell wall biogenesis IEP Predict GO terms from Neighborhoods
BP GO:0010036 response to boron-containing substance IEP Predict GO terms from Neighborhoods
BP GO:0010051 xylem and phloem pattern formation IEP Predict GO terms from Neighborhoods
BP GO:0010091 trichome branching IEP Predict GO terms from Neighborhoods
BP GO:0010152 pollen maturation IEP Predict GO terms from Neighborhoods
BP GO:0012501 programmed cell death IEP Predict GO terms from Neighborhoods
MF GO:0015631 tubulin binding IEP Predict GO terms from Neighborhoods
MF GO:0016462 pyrophosphatase activity IEP Predict GO terms from Neighborhoods
MF GO:0016787 hydrolase activity IEP Predict GO terms from Neighborhoods
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Predict GO terms from Neighborhoods
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Predict GO terms from Neighborhoods
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP Predict GO terms from Neighborhoods
MF GO:0019001 guanyl nucleotide binding IEP Predict GO terms from Neighborhoods
MF GO:0019900 kinase binding IEP Predict GO terms from Neighborhoods
MF GO:0019901 protein kinase binding IEP Predict GO terms from Neighborhoods
BP GO:0021700 developmental maturation IEP Predict GO terms from Neighborhoods
BP GO:0022414 reproductive process IEP Predict GO terms from Neighborhoods
BP GO:0030100 regulation of endocytosis IEP Predict GO terms from Neighborhoods
CC GO:0030135 coated vesicle IEP Predict GO terms from Neighborhoods
CC GO:0030136 clathrin-coated vesicle IEP Predict GO terms from Neighborhoods
CC GO:0030139 endocytic vesicle IEP Predict GO terms from Neighborhoods
MF GO:0030276 clathrin binding IEP Predict GO terms from Neighborhoods
BP GO:0031669 cellular response to nutrient levels IEP Predict GO terms from Neighborhoods
MF GO:0032561 guanyl ribonucleotide binding IEP Predict GO terms from Neighborhoods
BP GO:0032878 regulation of establishment or maintenance of cell polarity IEP Predict GO terms from Neighborhoods
BP GO:0032886 regulation of microtubule-based process IEP Predict GO terms from Neighborhoods
BP GO:0034050 programmed cell death induced by symbiont IEP Predict GO terms from Neighborhoods
CC GO:0034357 photosynthetic membrane IEP Predict GO terms from Neighborhoods
CC GO:0042170 plastid membrane IEP Predict GO terms from Neighborhoods
CC GO:0042651 thylakoid membrane IEP Predict GO terms from Neighborhoods
MF GO:0043167 ion binding IEP Predict GO terms from Neighborhoods
BP GO:0043207 response to external biotic stimulus IEP Predict GO terms from Neighborhoods
MF GO:0043424 protein histidine kinase binding IEP Predict GO terms from Neighborhoods
BP GO:0044419 biological process involved in interspecies interaction between organisms IEP Predict GO terms from Neighborhoods
CC GO:0045334 clathrin-coated endocytic vesicle IEP Predict GO terms from Neighborhoods
BP GO:0048285 organelle fission IEP Predict GO terms from Neighborhoods
BP GO:0048480 stigma development IEP Predict GO terms from Neighborhoods
BP GO:0048653 anther development IEP Predict GO terms from Neighborhoods
BP GO:0048766 root hair initiation IEP Predict GO terms from Neighborhoods
BP GO:0048831 regulation of shoot system development IEP Predict GO terms from Neighborhoods
BP GO:0051493 regulation of cytoskeleton organization IEP Predict GO terms from Neighborhoods
BP GO:0051702 biological process involved in interaction with symbiont IEP Predict GO terms from Neighborhoods
BP GO:0051707 response to other organism IEP Predict GO terms from Neighborhoods
BP GO:0051716 cellular response to stimulus IEP Predict GO terms from Neighborhoods
CC GO:0055035 plastid thylakoid membrane IEP Predict GO terms from Neighborhoods
BP GO:0060627 regulation of vesicle-mediated transport IEP Predict GO terms from Neighborhoods
BP GO:0070507 regulation of microtubule cytoskeleton organization IEP Predict GO terms from Neighborhoods
BP GO:0070542 response to fatty acid IEP Predict GO terms from Neighborhoods
BP GO:0071588 hydrogen peroxide mediated signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0072583 clathrin-dependent endocytosis IEP Predict GO terms from Neighborhoods
BP GO:0080029 cellular response to boron-containing substance levels IEP Predict GO terms from Neighborhoods
BP GO:0080157 regulation of plant-type cell wall organization or biogenesis IEP Predict GO terms from Neighborhoods
BP GO:0098542 defense response to other organism IEP Predict GO terms from Neighborhoods
CC GO:0099081 supramolecular polymer IEP Predict GO terms from Neighborhoods
CC GO:0099512 supramolecular fiber IEP Predict GO terms from Neighborhoods
CC GO:0099513 polymeric cytoskeletal fiber IEP Predict GO terms from Neighborhoods
BP GO:1903047 mitotic cell cycle process IEP Predict GO terms from Neighborhoods
BP GO:1903338 regulation of cell wall organization or biogenesis IEP Predict GO terms from Neighborhoods
BP GO:1905623 positive regulation of leaf development IEP Predict GO terms from Neighborhoods
BP GO:1905952 regulation of lipid localization IEP Predict GO terms from Neighborhoods
BP GO:2000024 regulation of leaf development IEP Predict GO terms from Neighborhoods
BP GO:2000114 regulation of establishment of cell polarity IEP Predict GO terms from Neighborhoods
BP GO:2000694 regulation of phragmoplast microtubule organization IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR022228 DUF3755 134 167
No external refs found!