SOLTUB.AGRIA.G00000043661


Description : S-adenosyl-L-methionine-dependent methyltransferases superfamily protein


Gene families : OG_02_0019049 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000043661
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_16


Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0000054 ribosomal subunit export from nucleus IEP Predict GO terms from Neighborhoods
CC GO:0000228 nuclear chromosome IEP Predict GO terms from Neighborhoods
CC GO:0000793 condensed chromosome IEP Predict GO terms from Neighborhoods
CC GO:0000794 condensed nuclear chromosome IEP Predict GO terms from Neighborhoods
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP Predict GO terms from Neighborhoods
MF GO:0003684 damaged DNA binding IEP Predict GO terms from Neighborhoods
MF GO:0003743 translation initiation factor activity IEP Predict GO terms from Neighborhoods
MF GO:0003958 NADPH-hemoprotein reductase activity IEP Predict GO terms from Neighborhoods
CC GO:0005686 U2 snRNP IEP Predict GO terms from Neighborhoods
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP Predict GO terms from Neighborhoods
CC GO:0005929 cilium IEP Predict GO terms from Neighborhoods
BP GO:0006402 mRNA catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006413 translational initiation IEP Predict GO terms from Neighborhoods
BP GO:0006415 translational termination IEP Predict GO terms from Neighborhoods
BP GO:0006513 protein monoubiquitination IEP Predict GO terms from Neighborhoods
BP GO:0006778 porphyrin-containing compound metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006787 porphyrin-containing compound catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006915 apoptotic process IEP Predict GO terms from Neighborhoods
MF GO:0008135 translation factor activity, RNA binding IEP Predict GO terms from Neighborhoods
MF GO:0008428 ribonuclease inhibitor activity IEP Predict GO terms from Neighborhoods
BP GO:0010154 fruit development IEP Predict GO terms from Neighborhoods
BP GO:0010390 histone monoubiquitination IEP Predict GO terms from Neighborhoods
BP GO:0015994 chlorophyll metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0015996 chlorophyll catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0016574 histone ubiquitination IEP Predict GO terms from Neighborhoods
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Predict GO terms from Neighborhoods
MF GO:0016653 oxidoreductase activity, acting on NAD(P)H, heme protein as acceptor IEP Predict GO terms from Neighborhoods
CC GO:0019005 SCF ubiquitin ligase complex IEP Predict GO terms from Neighborhoods
BP GO:0019439 aromatic compound catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Predict GO terms from Neighborhoods
CC GO:0030532 small nuclear ribonucleoprotein complex IEP Predict GO terms from Neighborhoods
BP GO:0031146 SCF-dependent proteasomal ubiquitin-dependent protein catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0031285 regulation of sorocarp stalk cell differentiation IEP Predict GO terms from Neighborhoods
BP GO:0031286 negative regulation of sorocarp stalk cell differentiation IEP Predict GO terms from Neighborhoods
MF GO:0031369 translation initiation factor binding IEP Predict GO terms from Neighborhoods
CC GO:0031465 Cul4B-RING E3 ubiquitin ligase complex IEP Predict GO terms from Neighborhoods
BP GO:0031503 protein-containing complex localization IEP Predict GO terms from Neighborhoods
BP GO:0032069 regulation of nuclease activity IEP Predict GO terms from Neighborhoods
BP GO:0032074 negative regulation of nuclease activity IEP Predict GO terms from Neighborhoods
BP GO:0032104 regulation of response to extracellular stimulus IEP Predict GO terms from Neighborhoods
BP GO:0032105 negative regulation of response to extracellular stimulus IEP Predict GO terms from Neighborhoods
BP GO:0032107 regulation of response to nutrient levels IEP Predict GO terms from Neighborhoods
BP GO:0032108 negative regulation of response to nutrient levels IEP Predict GO terms from Neighborhoods
BP GO:0032790 ribosome disassembly IEP Predict GO terms from Neighborhoods
BP GO:0032984 protein-containing complex disassembly IEP Predict GO terms from Neighborhoods
BP GO:0033013 tetrapyrrole metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0033015 tetrapyrrole catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0033304 chlorophyll a metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0033310 chlorophyll a catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0033522 histone H2A ubiquitination IEP Predict GO terms from Neighborhoods
BP GO:0033750 ribosome localization IEP Predict GO terms from Neighborhoods
BP GO:0034644 cellular response to UV IEP Predict GO terms from Neighborhoods
BP GO:0035518 histone H2A monoubiquitination IEP Predict GO terms from Neighborhoods
BP GO:0042254 ribosome biogenesis IEP Predict GO terms from Neighborhoods
BP GO:0042273 ribosomal large subunit biogenesis IEP Predict GO terms from Neighborhoods
MF GO:0043022 ribosome binding IEP Predict GO terms from Neighborhoods
MF GO:0043024 ribosomal small subunit binding IEP Predict GO terms from Neighborhoods
BP GO:0043523 regulation of neuron apoptotic process IEP Predict GO terms from Neighborhoods
BP GO:0043524 negative regulation of neuron apoptotic process IEP Predict GO terms from Neighborhoods
BP GO:0044085 cellular component biogenesis IEP Predict GO terms from Neighborhoods
BP GO:0044248 cellular catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0044265 cellular macromolecule catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0044270 cellular nitrogen compound catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0045931 positive regulation of mitotic cell cycle IEP Predict GO terms from Neighborhoods
BP GO:0046149 pigment catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0046700 heterocycle catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0051168 nuclear export IEP Predict GO terms from Neighborhoods
BP GO:0051247 positive regulation of protein metabolic process IEP Predict GO terms from Neighborhoods
MF GO:0051539 4 iron, 4 sulfur cluster binding IEP Predict GO terms from Neighborhoods
MF GO:0060698 endoribonuclease inhibitor activity IEP Predict GO terms from Neighborhoods
BP GO:0060699 regulation of endoribonuclease activity IEP Predict GO terms from Neighborhoods
BP GO:0060700 regulation of ribonuclease activity IEP Predict GO terms from Neighborhoods
BP GO:0060701 negative regulation of ribonuclease activity IEP Predict GO terms from Neighborhoods
BP GO:0060702 negative regulation of endoribonuclease activity IEP Predict GO terms from Neighborhoods
BP GO:0070481 nuclear-transcribed mRNA catabolic process, non-stop decay IEP Predict GO terms from Neighborhoods
BP GO:0070914 UV-damage excision repair IEP Predict GO terms from Neighborhoods
BP GO:0070936 protein K48-linked ubiquitination IEP Predict GO terms from Neighborhoods
BP GO:0075260 regulation of spore-bearing organ development IEP Predict GO terms from Neighborhoods
BP GO:0075262 negative regulation of spore-bearing organ development IEP Predict GO terms from Neighborhoods
CC GO:0080008 Cul4-RING E3 ubiquitin ligase complex IEP Predict GO terms from Neighborhoods
CC GO:0097525 spliceosomal snRNP complex IEP Predict GO terms from Neighborhoods
MF GO:0106371 fluorescent chlorophyll catabolite monooxygenase (deformylase) activity IEP Predict GO terms from Neighborhoods
CC GO:0120114 Sm-like protein family complex IEP Predict GO terms from Neighborhoods
MF GO:0140721 nuclease inhibitor activity IEP Predict GO terms from Neighborhoods
BP GO:1900087 positive regulation of G1/S transition of mitotic cell cycle IEP Predict GO terms from Neighborhoods
BP GO:1901214 regulation of neuron death IEP Predict GO terms from Neighborhoods
BP GO:1901215 negative regulation of neuron death IEP Predict GO terms from Neighborhoods
BP GO:1901361 organic cyclic compound catabolic process IEP Predict GO terms from Neighborhoods
BP GO:1901565 organonitrogen compound catabolic process IEP Predict GO terms from Neighborhoods
BP GO:1901575 organic substance catabolic process IEP Predict GO terms from Neighborhoods
BP GO:1901989 positive regulation of cell cycle phase transition IEP Predict GO terms from Neighborhoods
BP GO:1901992 positive regulation of mitotic cell cycle phase transition IEP Predict GO terms from Neighborhoods
BP GO:1902806 regulation of cell cycle G1/S phase transition IEP Predict GO terms from Neighborhoods
BP GO:1902808 positive regulation of cell cycle G1/S phase transition IEP Predict GO terms from Neighborhoods
BP GO:1903008 organelle disassembly IEP Predict GO terms from Neighborhoods
CC GO:1990452 Parkin-FBXW7-Cul1 ubiquitin ligase complex IEP Predict GO terms from Neighborhoods
BP GO:2000045 regulation of G1/S transition of mitotic cell cycle IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR004159 Put_SAM_MeTrfase 119 207
IPR004159 Put_SAM_MeTrfase 219 272
No external refs found!