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  5. SOLTUB.AGRIA.G00000004334

SOLTUB.AGRIA.G00000004334


Description : RmlC-like cupins superfamily protein


Gene families : OG_02_0000384 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000004334
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_193


Type GO Term Name Evidence Source
CC GO:0000325 plant-type vacuole IEA AHRD
CC GO:0005618 cell wall IEA AHRD
CC GO:0005886 plasma membrane IEA AHRD
MF GO:0030145 manganese ion binding IEA AHRD
CC GO:0031012 extracellular matrix IEA AHRD
CC GO:0048046 apoplast IEA AHRD
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Type GO Term Name Evidence Source
BP GO:0002239 response to oomycetes IEP Predict GO terms from Neighborhoods
BP GO:0002832 negative regulation of response to biotic stimulus IEP Predict GO terms from Neighborhoods
MF GO:0004611 phosphoenolpyruvate carboxykinase activity IEP Predict GO terms from Neighborhoods
MF GO:0004612 phosphoenolpyruvate carboxykinase (ATP) activity IEP Predict GO terms from Neighborhoods
MF GO:0004613 phosphoenolpyruvate carboxykinase (GTP) activity IEP Predict GO terms from Neighborhoods
CC GO:0005615 extracellular space IEP Predict GO terms from Neighborhoods
BP GO:0006083 acetate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006094 gluconeogenesis IEP Predict GO terms from Neighborhoods
BP GO:0009863 salicylic acid mediated signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0010726 positive regulation of hydrogen peroxide metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0015690 aluminum cation transport IEP Predict GO terms from Neighborhoods
BP GO:0015976 carbon utilization IEP Predict GO terms from Neighborhoods
BP GO:0019319 hexose biosynthetic process IEP Predict GO terms from Neighborhoods
CC GO:0031225 anchored component of membrane IEP Predict GO terms from Neighborhoods
CC GO:0031226 intrinsic component of plasma membrane IEP Predict GO terms from Neighborhoods
BP GO:0032102 negative regulation of response to external stimulus IEP Predict GO terms from Neighborhoods
BP GO:0044347 cell wall polysaccharide catabolic process IEP Predict GO terms from Neighborhoods
CC GO:0046658 anchored component of plasma membrane IEP Predict GO terms from Neighborhoods
BP GO:0080001 mucilage extrusion from seed coat IEP Predict GO terms from Neighborhoods
BP GO:0080140 regulation of jasmonic acid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0080141 regulation of jasmonic acid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0080142 regulation of salicylic acid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0140426 PAMP-triggered immunity signalling pathway IEP Predict GO terms from Neighborhoods
BP GO:1900425 negative regulation of defense response to bacterium IEP Predict GO terms from Neighborhoods
BP GO:1901428 regulation of syringal lignin biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1901430 positive regulation of syringal lignin biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:2000122 negative regulation of stomatal complex development IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR011051 RmlC_Cupin_sf 26 226
IPR006045 Cupin_1 66 217
No external refs found!