Coexpression cluster: Cluster_193 (HCCA Clusters (HRR 50 & PCC 0.5))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0031012 extracellular matrix 18.82% (16/85) 5.1 0.0 0.0
GO:0030145 manganese ion binding 16.47% (14/85) 5.68 0.0 0.0
GO:0048046 apoplast 27.06% (23/85) 3.45 0.0 0.0
GO:0004364 glutathione transferase activity 12.94% (11/85) 5.55 0.0 0.0
GO:0005576 extracellular region 31.76% (27/85) 2.77 0.0 0.0
GO:0009407 toxin catabolic process 11.76% (10/85) 5.69 0.0 0.0
GO:0006749 glutathione metabolic process 12.94% (11/85) 5.18 0.0 0.0
GO:0005618 cell wall 29.41% (25/85) 2.65 0.0 0.0
GO:0030312 external encapsulating structure 29.41% (25/85) 2.57 0.0 0.0
GO:0009404 toxin metabolic process 12.94% (11/85) 4.5 0.0 0.0
GO:0006575 cellular modified amino acid metabolic process 12.94% (11/85) 4.48 0.0 0.0
GO:0043295 glutathione binding 9.41% (8/85) 5.45 0.0 0.0
GO:1900750 oligopeptide binding 9.41% (8/85) 5.45 0.0 0.0
GO:0000325 plant-type vacuole 11.76% (10/85) 4.39 0.0 0.0
GO:0072341 modified amino acid binding 9.41% (8/85) 4.91 0.0 0.0
GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups 12.94% (11/85) 3.66 0.0 0.0
GO:1901681 sulfur compound binding 9.41% (8/85) 4.54 0.0 0.0
GO:0098754 detoxification 12.94% (11/85) 3.55 0.0 0.0
GO:0006790 sulfur compound metabolic process 17.65% (15/85) 2.6 0.0 2e-06
GO:0046914 transition metal ion binding 20.0% (17/85) 2.34 0.0 2e-06
GO:0006518 peptide metabolic process 14.12% (12/85) 2.98 0.0 2e-06
GO:1900367 positive regulation of defense response to insect 7.06% (6/85) 4.76 0.0 6e-06
GO:0009734 auxin-activated signaling pathway 10.59% (9/85) 3.31 0.0 1.9e-05
GO:0043603 cellular amide metabolic process 15.29% (13/85) 2.51 0.0 2.4e-05
GO:0009735 response to cytokinin 9.41% (8/85) 3.52 1e-06 2.7e-05
GO:0005773 vacuole 18.82% (16/85) 2.11 1e-06 3.7e-05
GO:0042277 peptide binding 9.41% (8/85) 3.46 1e-06 3.7e-05
GO:0044248 cellular catabolic process 23.53% (20/85) 1.77 1e-06 4.7e-05
GO:0005886 plasma membrane 34.12% (29/85) 1.32 1e-06 6.4e-05
GO:0009739 response to gibberellin 9.41% (8/85) 3.22 2e-06 0.000107
GO:0033218 amide binding 9.41% (8/85) 3.19 3e-06 0.00012
GO:0046686 response to cadmium ion 12.94% (11/85) 2.48 4e-06 0.000184
GO:2000068 regulation of defense response to insect 7.06% (6/85) 3.78 5e-06 0.000214
GO:0009755 hormone-mediated signaling pathway 17.65% (15/85) 1.96 6e-06 0.000233
GO:1901428 regulation of syringal lignin biosynthetic process 4.71% (4/85) 4.91 1e-05 0.000363
GO:1901430 positive regulation of syringal lignin biosynthetic process 4.71% (4/85) 4.91 1e-05 0.000363
GO:0019748 secondary metabolic process 17.65% (15/85) 1.86 1.4e-05 0.000487
GO:0005457 GDP-fucose transmembrane transporter activity 3.53% (3/85) 5.97 1.5e-05 0.000502
GO:0036080 purine nucleotide-sugar transmembrane transporter activity 3.53% (3/85) 5.97 1.5e-05 0.000502
GO:0005575 cellular_component 82.35% (70/85) 0.43 1.8e-05 0.000605
GO:0015783 GDP-fucose transmembrane transport 3.53% (3/85) 5.85 1.9e-05 0.000626
GO:0009056 catabolic process 23.53% (20/85) 1.47 2.3e-05 0.000732
GO:0046872 metal ion binding 27.06% (23/85) 1.32 2.4e-05 0.000741
GO:0090480 purine nucleotide-sugar transmembrane transport 3.53% (3/85) 5.73 2.5e-05 0.000747
GO:0110165 cellular anatomical entity 81.18% (69/85) 0.43 2.8e-05 0.000817
GO:0009751 response to salicylic acid 11.76% (10/85) 2.33 3e-05 0.000874
GO:0006979 response to oxidative stress 15.29% (13/85) 1.92 3.5e-05 0.000977
GO:0043169 cation binding 27.06% (23/85) 1.29 3.5e-05 0.000977
GO:0043455 regulation of secondary metabolic process 9.41% (8/85) 2.64 4.5e-05 0.001217
GO:2001147 camalexin binding 2.35% (2/85) 7.52 4.7e-05 0.001229
GO:0043167 ion binding 36.47% (31/85) 1.01 4.9e-05 0.001236
GO:1900378 positive regulation of secondary metabolite biosynthetic process 4.71% (4/85) 4.34 4.8e-05 0.001248
GO:0009628 response to abiotic stimulus 37.65% (32/85) 0.97 5.4e-05 0.001347
GO:0010035 response to inorganic substance 24.71% (21/85) 1.33 5.7e-05 0.001395
GO:0018973 trinitrotoluene metabolic process 3.53% (3/85) 5.04 0.000107 0.002283
GO:0018974 2,4,6-trinitrotoluene metabolic process 3.53% (3/85) 5.04 0.000107 0.002283
GO:0019326 nitrotoluene metabolic process 3.53% (3/85) 5.04 0.000107 0.002283
GO:0046256 2,4,6-trinitrotoluene catabolic process 3.53% (3/85) 5.04 0.000107 0.002283
GO:0046260 trinitrotoluene catabolic process 3.53% (3/85) 5.04 0.000107 0.002283
GO:0046263 nitrotoluene catabolic process 3.53% (3/85) 5.04 0.000107 0.002283
GO:0072490 toluene-containing compound metabolic process 3.53% (3/85) 5.04 0.000107 0.002283
GO:0072491 toluene-containing compound catabolic process 3.53% (3/85) 5.04 0.000107 0.002283
GO:0006950 response to stress 47.06% (40/85) 0.75 0.000141 0.002962
GO:1900376 regulation of secondary metabolite biosynthetic process 7.06% (6/85) 2.91 0.000156 0.003228
GO:0005338 nucleotide-sugar transmembrane transporter activity 3.53% (3/85) 4.7 0.000215 0.004368
GO:0010038 response to metal ion 14.12% (12/85) 1.75 0.000223 0.004468
GO:0097305 response to alcohol 15.29% (13/85) 1.65 0.000237 0.004676
GO:0005464 UDP-xylose transmembrane transporter activity 2.35% (2/85) 6.39 0.000254 0.004859
GO:0015790 UDP-xylose transmembrane transport 2.35% (2/85) 6.39 0.000254 0.004859
GO:0009737 response to abscisic acid 14.12% (12/85) 1.7 0.000298 0.005547
GO:0015780 nucleotide-sugar transmembrane transport 3.53% (3/85) 4.55 0.000295 0.005575
GO:0044347 cell wall polysaccharide catabolic process 3.53% (3/85) 4.48 0.000342 0.006277
GO:0003674 molecular_function 77.65% (66/85) 0.38 0.000377 0.006826
GO:0043290 apocarotenoid catabolic process 2.35% (2/85) 5.94 0.000482 0.008374
GO:0046345 abscisic acid catabolic process 2.35% (2/85) 5.94 0.000482 0.008374
GO:0010089 xylem development 5.88% (5/85) 2.96 0.000482 0.008596
GO:0016107 sesquiterpenoid catabolic process 2.35% (2/85) 5.85 0.00055 0.009432
GO:1901141 regulation of lignin biosynthetic process 4.71% (4/85) 3.31 0.000744 0.012603
GO:0002833 positive regulation of response to biotic stimulus 9.41% (8/85) 2.03 0.000767 0.012671
GO:2000762 regulation of phenylpropanoid metabolic process 5.88% (5/85) 2.81 0.000765 0.012787
GO:1901700 response to oxygen-containing compound 30.59% (26/85) 0.91 0.000789 0.012875
GO:0031349 positive regulation of defense response 9.41% (8/85) 2.0 0.000903 0.014545
GO:0042221 response to chemical 40.0% (34/85) 0.71 0.001049 0.016116
GO:0043231 intracellular membrane-bounded organelle 51.76% (44/85) 0.57 0.00104 0.016155
GO:0007165 signal transduction 22.35% (19/85) 1.1 0.001029 0.016179
GO:0009266 response to temperature stimulus 16.47% (14/85) 1.35 0.001022 0.016262
GO:0120256 olefinic compound catabolic process 2.35% (2/85) 5.32 0.001148 0.017427
GO:0005460 UDP-glucose transmembrane transporter activity 2.35% (2/85) 5.26 0.00125 0.018352
GO:0042344 indole glucosinolate catabolic process 2.35% (2/85) 5.26 0.00125 0.018352
GO:0016998 cell wall macromolecule catabolic process 3.53% (3/85) 3.85 0.001225 0.018396
GO:0005459 UDP-galactose transmembrane transporter activity 2.35% (2/85) 5.2 0.001357 0.018675
GO:0072334 UDP-galactose transmembrane transport 2.35% (2/85) 5.2 0.001357 0.018675
GO:1904659 glucose transmembrane transport 2.35% (2/85) 5.2 0.001357 0.018675
GO:0032103 positive regulation of response to external stimulus 9.41% (8/85) 1.9 0.001384 0.018846
GO:0004601 peroxidase activity 4.71% (4/85) 3.08 0.001316 0.0189
GO:0014070 response to organic cyclic compound 14.12% (12/85) 1.46 0.00131 0.019021
GO:0043227 membrane-bounded organelle 51.76% (44/85) 0.55 0.001344 0.019087
GO:0016684 oxidoreductase activity, acting on peroxide as acceptor 4.71% (4/85) 3.03 0.001503 0.020261
GO:0015786 UDP-glucose transmembrane transport 2.35% (2/85) 5.09 0.001583 0.021127
GO:0080148 negative regulation of response to water deprivation 3.53% (3/85) 3.7 0.001629 0.021519
GO:0042545 cell wall modification 7.06% (6/85) 2.22 0.001857 0.024288
GO:0009408 response to heat 9.41% (8/85) 1.83 0.001909 0.024724
GO:0009833 plant-type primary cell wall biogenesis 2.35% (2/85) 4.8 0.002362 0.029432
GO:0016145 S-glycoside catabolic process 2.35% (2/85) 4.8 0.002362 0.029432
GO:0019759 glycosinolate catabolic process 2.35% (2/85) 4.8 0.002362 0.029432
GO:0019762 glucosinolate catabolic process 2.35% (2/85) 4.8 0.002362 0.029432
GO:2000030 regulation of response to red or far red light 4.71% (4/85) 2.83 0.00247 0.030497
GO:0016209 antioxidant activity 4.71% (4/85) 2.81 0.002647 0.032374
GO:0033993 response to lipid 18.82% (16/85) 1.09 0.002923 0.035423
GO:0042436 indole-containing compound catabolic process 2.35% (2/85) 4.6 0.003122 0.037497
GO:0015932 nucleobase-containing compound transmembrane transporter activity 3.53% (3/85) 3.31 0.003513 0.041808
GO:0060416 response to growth hormone 2.35% (2/85) 4.49 0.003627 0.042776
GO:0010087 phloem or xylem histogenesis 7.06% (6/85) 2.01 0.003873 0.045279
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_215 0.008 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_224 0.008 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_253 0.008 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_20 0.017 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_23 0.009 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_25 0.008 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_31 0.008 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_52 0.009 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_67 0.007 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_86 0.007 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_93 0.01 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_110 0.008 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_120 0.01 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_133 0.009 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_136 0.008 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_138 0.008 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_158 0.012 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_190 0.007 Orthogroups with 8 Potato genotypes Compare
Sequences (85) (download table)

InterPro Domains

GO Terms

Family Terms