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  5. SOLTUB.AGRIA.G00000004349

SOLTUB.AGRIA.G00000004349


Description : RmlC-like cupins superfamily protein


Gene families : OG_02_0000044 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000004349
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_193

Target Alias Description ECC score Gene Family Method Actions
SOLTUB.AGRIA.G00000004354 No alias RmlC-like cupins superfamily protein 0.02 Orthogroups with 8 Potato genotypes
SOLTUB.AGRIA.G00000004354 No alias RmlC-like cupins superfamily protein 0.02 Orthogroups with 8 Potato genotypes
SOLTUB.AGRIA.G00000004354 No alias RmlC-like cupins superfamily protein 0.02 Orthogroups with 8 Potato genotypes

Type GO Term Name Evidence Source
CC GO:0000325 plant-type vacuole IEA AHRD
CC GO:0005618 cell wall IEA AHRD
CC GO:0005886 plasma membrane IEA AHRD
MF GO:0030145 manganese ion binding IEA AHRD
CC GO:0031012 extracellular matrix IEA AHRD
CC GO:0048046 apoplast IEA AHRD
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Type GO Term Name Evidence Source
BP GO:0000768 syncytium formation by plasma membrane fusion IEP Predict GO terms from Neighborhoods
BP GO:0001824 blastocyst development IEP Predict GO terms from Neighborhoods
BP GO:0001837 epithelial to mesenchymal transition IEP Predict GO terms from Neighborhoods
MF GO:0004198 calcium-dependent cysteine-type endopeptidase activity IEP Predict GO terms from Neighborhoods
MF GO:0004364 glutathione transferase activity IEP Predict GO terms from Neighborhoods
MF GO:0004611 phosphoenolpyruvate carboxykinase activity IEP Predict GO terms from Neighborhoods
MF GO:0004612 phosphoenolpyruvate carboxykinase (ATP) activity IEP Predict GO terms from Neighborhoods
MF GO:0004613 phosphoenolpyruvate carboxykinase (GTP) activity IEP Predict GO terms from Neighborhoods
MF GO:0005154 epidermal growth factor receptor binding IEP Predict GO terms from Neighborhoods
BP GO:0005996 monosaccharide metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006083 acetate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006094 gluconeogenesis IEP Predict GO terms from Neighborhoods
BP GO:0006518 peptide metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006575 cellular modified amino acid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006749 glutathione metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006901 vesicle coating IEP Predict GO terms from Neighborhoods
BP GO:0006919 activation of cysteine-type endopeptidase activity involved in apoptotic process IEP Predict GO terms from Neighborhoods
BP GO:0007043 cell-cell junction assembly IEP Predict GO terms from Neighborhoods
BP GO:0007520 myoblast fusion IEP Predict GO terms from Neighborhoods
BP GO:0009404 toxin metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009407 toxin catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009608 response to symbiont IEP Predict GO terms from Neighborhoods
BP GO:0009610 response to symbiotic fungus IEP Predict GO terms from Neighborhoods
BP GO:0009863 salicylic acid mediated signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0010026 trichome differentiation IEP Predict GO terms from Neighborhoods
BP GO:0010038 response to metal ion IEP Predict GO terms from Neighborhoods
BP GO:0010158 abaxial cell fate specification IEP Predict GO terms from Neighborhoods
BP GO:0010482 regulation of epidermal cell division IEP Predict GO terms from Neighborhoods
BP GO:0010731 protein glutathionylation IEP Predict GO terms from Neighborhoods
BP GO:0010880 regulation of release of sequestered calcium ion into cytosol by sarcoplasmic reticulum IEP Predict GO terms from Neighborhoods
BP GO:0014029 neural crest formation IEP Predict GO terms from Neighborhoods
BP GO:0014032 neural crest cell development IEP Predict GO terms from Neighborhoods
BP GO:0015690 aluminum cation transport IEP Predict GO terms from Neighborhoods
BP GO:0015976 carbon utilization IEP Predict GO terms from Neighborhoods
BP GO:0016036 cellular response to phosphate starvation IEP Predict GO terms from Neighborhoods
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Predict GO terms from Neighborhoods
BP GO:0018973 trinitrotoluene metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0018974 2,4,6-trinitrotoluene metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0019326 nitrotoluene metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0019852 L-ascorbic acid metabolic process IEP Predict GO terms from Neighborhoods
CC GO:0030127 COPII vesicle coat IEP Predict GO terms from Neighborhoods
CC GO:0031225 anchored component of membrane IEP Predict GO terms from Neighborhoods
CC GO:0031226 intrinsic component of plasma membrane IEP Predict GO terms from Neighborhoods
CC GO:0031463 Cul3-RING ubiquitin ligase complex IEP Predict GO terms from Neighborhoods
BP GO:0034635 glutathione transport IEP Predict GO terms from Neighborhoods
BP GO:0034775 glutathione transmembrane transport IEP Predict GO terms from Neighborhoods
BP GO:0035443 tripeptide transmembrane transport IEP Predict GO terms from Neighborhoods
BP GO:0042059 negative regulation of epidermal growth factor receptor signaling pathway IEP Predict GO terms from Neighborhoods
MF GO:0043495 protein-membrane adaptor activity IEP Predict GO terms from Neighborhoods
BP GO:0046256 2,4,6-trinitrotoluene catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0046260 trinitrotoluene catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0046263 nitrotoluene catabolic process IEP Predict GO terms from Neighborhoods
CC GO:0046658 anchored component of plasma membrane IEP Predict GO terms from Neighborhoods
BP GO:0046686 response to cadmium ion IEP Predict GO terms from Neighborhoods
BP GO:0048208 COPII vesicle coating IEP Predict GO terms from Neighborhoods
MF GO:0048306 calcium-dependent protein binding IEP Predict GO terms from Neighborhoods
BP GO:0048762 mesenchymal cell differentiation IEP Predict GO terms from Neighborhoods
BP GO:0048864 stem cell development IEP Predict GO terms from Neighborhoods
BP GO:0051279 regulation of release of sequestered calcium ion into cytosol IEP Predict GO terms from Neighborhoods
BP GO:0055063 sulfate ion homeostasis IEP Predict GO terms from Neighborhoods
MF GO:0070851 growth factor receptor binding IEP Predict GO terms from Neighborhoods
BP GO:0071230 cellular response to amino acid stimulus IEP Predict GO terms from Neighborhoods
BP GO:0071486 cellular response to high light intensity IEP Predict GO terms from Neighborhoods
BP GO:0072490 toluene-containing compound metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0072491 toluene-containing compound catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0072505 divalent inorganic anion homeostasis IEP Predict GO terms from Neighborhoods
BP GO:0080159 zygote elongation IEP Predict GO terms from Neighborhoods
CC GO:0097038 perinuclear endoplasmic reticulum IEP Predict GO terms from Neighborhoods
CC GO:0098552 side of membrane IEP Predict GO terms from Neighborhoods
BP GO:0140205 oligopeptide import across plasma membrane IEP Predict GO terms from Neighborhoods
BP GO:0140253 cell-cell fusion IEP Predict GO terms from Neighborhoods
BP GO:0140426 PAMP-triggered immunity signalling pathway IEP Predict GO terms from Neighborhoods
MF GO:0140767 enzyme-substrate adaptor activity IEP Predict GO terms from Neighborhoods
BP GO:1900424 regulation of defense response to bacterium IEP Predict GO terms from Neighborhoods
BP GO:1900425 negative regulation of defense response to bacterium IEP Predict GO terms from Neighborhoods
BP GO:1901185 negative regulation of ERBB signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:1901583 tetrapeptide import across plasma membrane IEP Predict GO terms from Neighborhoods
BP GO:1902525 regulation of protein monoubiquitination IEP Predict GO terms from Neighborhoods
BP GO:1902527 positive regulation of protein monoubiquitination IEP Predict GO terms from Neighborhoods
BP GO:1990388 xylem-to-phloem iron transport IEP Predict GO terms from Neighborhoods
MF GO:1990756 ubiquitin ligase-substrate adaptor activity IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR011051 RmlC_Cupin_sf 24 223
IPR006045 Cupin_1 65 216
IPR027417 P-loop_NTPase 239 313
No external refs found!