Description : U3 small nucleolar RNA-associated protein 25
Gene families : OG_02_0006322 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family
Sequence : coding (download), protein (download)
GO:0010102Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000044128 | |
| Cluster | HCCA Clusters (HRR 50 & PCC 0.5): Cluster_256 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000460 | maturation of 5.8S rRNA | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0000463 | maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0000466 | maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0000470 | maturation of LSU-rRNA | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0001510 | RNA methylation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0002097 | tRNA wobble base modification | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0002098 | tRNA wobble uridine modification | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0002939 | tRNA N1-guanine methylation | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0004066 | asparagine synthase (glutamine-hydrolyzing) activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0004652 | polynucleotide adenylyltransferase activity | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0005737 | cytoplasm | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006396 | RNA processing | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006399 | tRNA metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006400 | tRNA modification | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006528 | asparagine metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006529 | asparagine biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006541 | glutamine metabolic process | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0008023 | transcription elongation factor complex | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0008033 | tRNA processing | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0008173 | RNA methyltransferase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0008175 | tRNA methyltransferase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0009019 | tRNA (guanine-N1-)-methyltransferase activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009064 | glutamine family amino acid metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009066 | aspartate family amino acid metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009067 | aspartate family amino acid biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009451 | RNA modification | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0016070 | RNA metabolic process | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0016423 | tRNA (guanine) methyltransferase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0016879 | ligase activity, forming carbon-nitrogen bonds | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0016884 | carbon-nitrogen ligase activity, with glutamine as amido-N-donor | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0022613 | ribonucleoprotein complex biogenesis | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0030488 | tRNA methylation | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0030684 | preribosome | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0030687 | preribosome, large subunit precursor | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0031123 | RNA 3'-end processing | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0031537 | regulation of anthocyanin metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0031538 | negative regulation of anthocyanin metabolic process | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0031974 | membrane-enclosed lumen | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0032104 | regulation of response to extracellular stimulus | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0032107 | regulation of response to nutrient levels | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0033588 | elongator holoenzyme complex | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0034470 | ncRNA processing | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0034660 | ncRNA metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0042254 | ribosome biogenesis | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0043233 | organelle lumen | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0043609 | regulation of carbon utilization | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0043631 | RNA polyadenylation | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0052906 | tRNA (guanine(37)-N(1))-methyltransferase activity | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0070013 | intracellular organelle lumen | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0070525 | tRNA threonylcarbamoyladenosine metabolic process | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0070566 | adenylyltransferase activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0070900 | mitochondrial tRNA modification | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0070901 | mitochondrial tRNA methylation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0070981 | L-asparagine biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0070982 | L-asparagine metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0071322 | cellular response to carbohydrate stimulus | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0071324 | cellular response to disaccharide stimulus | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0071329 | cellular response to sucrose stimulus | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0080008 | Cul4-RING E3 ubiquitin ligase complex | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0090646 | mitochondrial tRNA processing | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0140535 | intracellular protein-containing complex | IEP | Predict GO terms from Neighborhoods |
| BP | GO:2000024 | regulation of leaf development | IEP | Predict GO terms from Neighborhoods |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR010678 | UTP25 | 262 | 745 |
| No external refs found! |