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  5. SOLTUB.AGRIA.G00000044128

SOLTUB.AGRIA.G00000044128


Description : U3 small nucleolar RNA-associated protein 25


Gene families : OG_02_0006322 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000044128
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_256


Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000460 maturation of 5.8S rRNA IEP Predict GO terms from Neighborhoods
BP GO:0000463 maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IEP Predict GO terms from Neighborhoods
BP GO:0000466 maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IEP Predict GO terms from Neighborhoods
BP GO:0000470 maturation of LSU-rRNA IEP Predict GO terms from Neighborhoods
BP GO:0001510 RNA methylation IEP Predict GO terms from Neighborhoods
BP GO:0002097 tRNA wobble base modification IEP Predict GO terms from Neighborhoods
BP GO:0002098 tRNA wobble uridine modification IEP Predict GO terms from Neighborhoods
BP GO:0002939 tRNA N1-guanine methylation IEP Predict GO terms from Neighborhoods
MF GO:0004066 asparagine synthase (glutamine-hydrolyzing) activity IEP Predict GO terms from Neighborhoods
MF GO:0004652 polynucleotide adenylyltransferase activity IEP Predict GO terms from Neighborhoods
CC GO:0005737 cytoplasm IEP Predict GO terms from Neighborhoods
BP GO:0006139 nucleobase-containing compound metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006396 RNA processing IEP Predict GO terms from Neighborhoods
BP GO:0006399 tRNA metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006400 tRNA modification IEP Predict GO terms from Neighborhoods
BP GO:0006528 asparagine metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006529 asparagine biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0006541 glutamine metabolic process IEP Predict GO terms from Neighborhoods
CC GO:0008023 transcription elongation factor complex IEP Predict GO terms from Neighborhoods
BP GO:0008033 tRNA processing IEP Predict GO terms from Neighborhoods
MF GO:0008173 RNA methyltransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0008175 tRNA methyltransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0009019 tRNA (guanine-N1-)-methyltransferase activity IEP Predict GO terms from Neighborhoods
BP GO:0009064 glutamine family amino acid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009066 aspartate family amino acid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009067 aspartate family amino acid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009451 RNA modification IEP Predict GO terms from Neighborhoods
BP GO:0016070 RNA metabolic process IEP Predict GO terms from Neighborhoods
MF GO:0016423 tRNA (guanine) methyltransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP Predict GO terms from Neighborhoods
MF GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor IEP Predict GO terms from Neighborhoods
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Predict GO terms from Neighborhoods
BP GO:0030488 tRNA methylation IEP Predict GO terms from Neighborhoods
CC GO:0030684 preribosome IEP Predict GO terms from Neighborhoods
CC GO:0030687 preribosome, large subunit precursor IEP Predict GO terms from Neighborhoods
BP GO:0031123 RNA 3'-end processing IEP Predict GO terms from Neighborhoods
BP GO:0031537 regulation of anthocyanin metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0031538 negative regulation of anthocyanin metabolic process IEP Predict GO terms from Neighborhoods
CC GO:0031974 membrane-enclosed lumen IEP Predict GO terms from Neighborhoods
BP GO:0032104 regulation of response to extracellular stimulus IEP Predict GO terms from Neighborhoods
BP GO:0032107 regulation of response to nutrient levels IEP Predict GO terms from Neighborhoods
CC GO:0033588 elongator holoenzyme complex IEP Predict GO terms from Neighborhoods
BP GO:0034470 ncRNA processing IEP Predict GO terms from Neighborhoods
BP GO:0034641 cellular nitrogen compound metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0034660 ncRNA metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0042254 ribosome biogenesis IEP Predict GO terms from Neighborhoods
CC GO:0043233 organelle lumen IEP Predict GO terms from Neighborhoods
BP GO:0043609 regulation of carbon utilization IEP Predict GO terms from Neighborhoods
BP GO:0043631 RNA polyadenylation IEP Predict GO terms from Neighborhoods
MF GO:0052906 tRNA (guanine(37)-N(1))-methyltransferase activity IEP Predict GO terms from Neighborhoods
CC GO:0070013 intracellular organelle lumen IEP Predict GO terms from Neighborhoods
BP GO:0070525 tRNA threonylcarbamoyladenosine metabolic process IEP Predict GO terms from Neighborhoods
MF GO:0070566 adenylyltransferase activity IEP Predict GO terms from Neighborhoods
BP GO:0070900 mitochondrial tRNA modification IEP Predict GO terms from Neighborhoods
BP GO:0070901 mitochondrial tRNA methylation IEP Predict GO terms from Neighborhoods
BP GO:0070981 L-asparagine biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0070982 L-asparagine metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0071322 cellular response to carbohydrate stimulus IEP Predict GO terms from Neighborhoods
BP GO:0071324 cellular response to disaccharide stimulus IEP Predict GO terms from Neighborhoods
BP GO:0071329 cellular response to sucrose stimulus IEP Predict GO terms from Neighborhoods
CC GO:0080008 Cul4-RING E3 ubiquitin ligase complex IEP Predict GO terms from Neighborhoods
BP GO:0090304 nucleic acid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0090646 mitochondrial tRNA processing IEP Predict GO terms from Neighborhoods
CC GO:0140535 intracellular protein-containing complex IEP Predict GO terms from Neighborhoods
BP GO:2000024 regulation of leaf development IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR010678 UTP25 262 745
No external refs found!